Wall clock time and date at job start Sun Mar 7 2021 05:00:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35893 * 116.99735 * 2 1 4 4 C 1.38752 * 120.03052 * 359.97438 * 3 2 1 5 5 C 1.38193 * 120.05808 * 180.02562 * 4 3 2 6 6 C 1.38151 * 120.11191 * 0.02562 * 5 4 3 7 7 C 1.50696 * 119.97946 * 179.97438 * 6 5 4 8 8 O 1.42896 * 109.47220 * 255.00292 * 7 6 5 9 9 Si 1.86301 * 109.46719 * 14.99924 * 7 6 5 10 10 H 1.48506 * 109.47302 * 179.97438 * 9 7 6 11 11 H 1.48503 * 109.47334 * 60.00029 * 9 7 6 12 12 H 1.48500 * 109.47376 * 300.00026 * 9 7 6 13 13 C 1.38797 * 120.05064 * 0.25378 * 6 5 4 14 14 O 1.35898 * 120.02844 * 179.74867 * 13 6 5 15 15 C 1.42900 * 117.00125 * 180.02562 * 14 13 6 16 16 C 1.50702 * 109.47077 * 179.97438 * 15 14 13 17 17 O 1.21278 * 119.99968 * 0.02562 * 16 15 14 18 18 N 1.34772 * 120.00196 * 179.97438 * 16 15 14 19 19 C 1.46401 * 118.75410 * 359.73914 * 18 16 15 20 20 C 1.53918 * 109.06185 * 253.44717 * 19 18 16 21 21 Si 1.85187 * 107.12612 * 308.56991 * 20 19 18 22 22 C 1.87452 * 111.52724 * 168.31971 * 21 20 19 23 23 C 1.55678 * 100.85314 * 114.79762 * 22 21 20 24 24 C 1.53779 * 111.39504 * 27.99625 * 23 22 21 25 25 C 1.56393 * 109.77582 * 312.17374 * 24 23 22 26 26 C 1.85200 * 110.14298 * 43.93524 * 21 20 19 27 27 C 1.46398 * 118.75830 * 179.97438 * 18 16 15 28 28 C 1.38609 * 119.94426 * 359.48961 * 13 6 5 29 29 H 1.08997 * 109.47353 * 299.99653 * 1 2 3 30 30 H 1.09002 * 109.47105 * 60.00386 * 1 2 3 31 31 H 1.09004 * 109.46634 * 179.97438 * 1 2 3 32 32 H 1.07999 * 119.97091 * 0.02562 * 4 3 2 33 33 H 1.08003 * 119.94867 * 179.97438 * 5 4 3 34 34 H 1.08996 * 109.47524 * 134.99639 * 7 6 5 35 35 H 0.96708 * 114.00095 * 179.97438 * 8 7 6 36 36 H 1.09000 * 109.46631 * 299.99379 * 15 14 13 37 37 H 1.08996 * 109.47363 * 59.99565 * 15 14 13 38 38 H 1.09006 * 109.58571 * 13.18817 * 19 18 16 39 39 H 1.08996 * 109.59227 * 133.62012 * 19 18 16 40 40 H 1.09001 * 110.00427 * 189.12022 * 20 19 18 41 41 H 1.09002 * 109.83878 * 67.93025 * 20 19 18 42 42 H 1.09007 * 111.14227 * 232.70050 * 22 21 20 43 43 H 1.09006 * 111.14132 * 356.89645 * 22 21 20 44 44 H 1.09004 * 109.10398 * 267.48608 * 23 22 21 45 45 H 1.08991 * 109.10867 * 148.50786 * 23 22 21 46 46 H 1.09001 * 109.42243 * 192.08544 * 24 23 22 47 47 H 1.09001 * 109.42509 * 72.26773 * 24 23 22 48 48 H 1.09002 * 111.49693 * 281.94685 * 25 24 23 49 49 H 1.09005 * 111.49643 * 156.82267 * 25 24 23 50 50 H 1.08994 * 109.92470 * 196.56420 * 26 21 20 51 51 H 1.08996 * 109.92299 * 75.36395 * 26 21 20 52 52 H 1.08995 * 109.58867 * 226.37378 * 27 18 16 53 53 H 1.08997 * 109.58461 * 346.80945 * 27 18 16 54 54 H 1.08010 * 120.05516 * 180.25710 * 28 13 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2108 0.0000 4 6 1.2908 2.3749 -0.0005 5 6 1.9175 3.6065 -0.0011 6 6 3.2969 3.6822 -0.0016 7 6 3.9773 5.0269 -0.0028 8 8 4.5029 5.2936 -1.3045 9 14 2.7438 6.3472 0.4513 10 1 3.4143 7.6723 0.4508 11 1 2.1974 6.0700 1.8041 12 1 1.6366 6.3517 -0.5383 13 6 4.0568 2.5208 -0.0069 14 8 5.4137 2.5958 -0.0126 15 6 6.1318 1.3603 -0.0185 16 6 7.6126 1.6400 -0.0249 17 8 8.0135 2.7846 -0.0240 18 7 8.4914 0.6182 -0.0305 19 6 7.9775 -0.7526 -0.0244 20 6 8.2004 -1.3669 1.3692 21 14 9.9831 -1.1096 1.7997 22 6 10.3167 -1.4907 3.6045 23 6 11.2576 -2.7242 3.4746 24 6 12.0476 -2.6906 2.1557 25 6 11.0789 -2.3868 0.9661 26 6 10.5028 0.6132 1.3617 27 6 9.9237 0.9211 -0.0372 28 6 3.4305 1.2842 -0.0010 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 0.2123 2.3183 -0.0005 33 1 1.3280 4.5115 -0.0019 34 1 4.7899 5.0236 0.7236 35 1 4.9554 6.1451 -1.3791 36 1 5.8739 0.7861 0.8714 37 1 5.8662 0.7899 -0.9085 38 1 6.9111 -0.7442 -0.2502 39 1 8.5066 -1.3446 -0.7713 40 1 7.9736 -2.4328 1.3475 41 1 7.5657 -0.8658 2.1001 42 1 10.8236 -0.6594 4.0947 43 1 9.3967 -1.7512 4.1279 44 1 10.6590 -3.6345 3.5089 45 1 11.9578 -2.7284 4.3098 46 1 12.5264 -3.6566 1.9954 47 1 12.8102 -1.9137 2.2096 48 1 10.5118 -3.2716 0.6768 49 1 11.6118 -1.9616 0.1156 50 1 11.5905 0.6778 1.3358 51 1 10.1051 1.3181 2.0918 52 1 10.4241 0.3045 -0.7838 53 1 10.0731 1.9751 -0.2710 54 1 4.0201 0.3792 -0.0009 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15733048_4974312.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:00:14 Heat of formation + Delta-G solvation = -137.576791 kcal Electronic energy + Delta-G solvation = -33527.030176 eV Core-core repulsion = 29167.537102 eV Total energy + Delta-G solvation = -4359.493073 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 379.182 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -41.89567 -41.11372 -39.90236 -38.26392 -37.37047 -36.98986 -36.14449 -32.94797 -32.38151 -31.45513 -30.72512 -29.68560 -28.97952 -28.34892 -26.05858 -24.99121 -24.35595 -23.99258 -23.10835 -22.36349 -21.03924 -20.23976 -19.96057 -18.47593 -18.33851 -18.06667 -17.49057 -17.29355 -16.89926 -16.81029 -16.67190 -16.05491 -15.92663 -15.83238 -15.58052 -15.55214 -15.23768 -14.88173 -14.76973 -14.42749 -14.25098 -14.21292 -14.02394 -13.79759 -13.58201 -13.53516 -13.37347 -13.25478 -13.20737 -12.67602 -12.52869 -12.44661 -12.40946 -12.31357 -12.15810 -12.11726 -11.95057 -11.90882 -11.71756 -11.60313 -11.35807 -10.99806 -10.44758 -10.38483 -10.23498 -10.23070 -9.76875 -9.71858 -9.11608 0.16628 0.28065 1.15919 1.37996 1.41746 1.45294 1.50368 1.76426 1.85846 1.87470 1.94278 2.20898 2.42747 2.52539 2.65604 3.28653 3.54709 3.68197 3.83244 3.94711 3.97879 4.04174 4.09334 4.12267 4.14758 4.15655 4.18518 4.28320 4.29803 4.36011 4.36745 4.40978 4.43344 4.43796 4.60429 4.62519 4.64637 4.70309 4.71304 4.77647 4.84658 4.98868 5.02036 5.11934 5.13209 5.19998 5.21132 5.26611 5.31818 5.36074 5.39377 5.42565 5.52895 5.53767 5.58352 6.06493 6.21929 6.35610 6.82319 7.00367 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.326 6.326 3 C 0.165 3.835 4 C -0.239 4.239 5 C -0.051 4.051 6 C -0.165 4.165 7 C -0.079 4.079 8 O -0.562 6.562 9 Si 0.987 3.013 10 H -0.259 1.259 11 H -0.252 1.252 12 H -0.252 1.252 13 C 0.178 3.822 14 O -0.300 6.300 15 C 0.032 3.968 16 C 0.509 3.491 17 O -0.567 6.567 18 N -0.604 5.604 19 C 0.099 3.901 20 C -0.433 4.433 21 Si 1.056 2.944 22 C -0.426 4.426 23 C -0.123 4.123 24 C -0.128 4.128 25 C -0.405 4.405 26 C -0.443 4.443 27 C 0.116 3.884 28 C -0.250 4.250 29 H 0.068 0.932 30 H 0.066 0.934 31 H 0.119 0.881 32 H 0.157 0.843 33 H 0.146 0.854 34 H 0.065 0.935 35 H 0.391 0.609 36 H 0.121 0.879 37 H 0.120 0.880 38 H 0.103 0.897 39 H 0.109 0.891 40 H 0.116 0.884 41 H 0.081 0.919 42 H 0.067 0.933 43 H 0.080 0.920 44 H 0.066 0.934 45 H 0.052 0.948 46 H 0.063 0.937 47 H 0.061 0.939 48 H 0.089 0.911 49 H 0.084 0.916 50 H 0.093 0.907 51 H 0.061 0.939 52 H 0.105 0.895 53 H 0.067 0.933 54 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.886 -6.456 0.471 7.087 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.239 6.239 3 C 0.119 3.881 4 C -0.258 4.258 5 C -0.069 4.069 6 C -0.166 4.166 7 C -0.187 4.187 8 O -0.370 6.370 9 Si 0.809 3.191 10 H -0.183 1.183 11 H -0.176 1.176 12 H -0.176 1.176 13 C 0.131 3.869 14 O -0.212 6.212 15 C -0.046 4.046 16 C 0.297 3.703 17 O -0.446 6.446 18 N -0.338 5.338 19 C -0.022 4.022 20 C -0.521 4.521 21 Si 1.246 2.754 22 C -0.510 4.510 23 C -0.160 4.160 24 C -0.166 4.166 25 C -0.492 4.492 26 C -0.527 4.527 27 C -0.006 4.006 28 C -0.269 4.269 29 H 0.087 0.913 30 H 0.085 0.915 31 H 0.137 0.863 32 H 0.175 0.825 33 H 0.163 0.837 34 H 0.083 0.917 35 H 0.240 0.760 36 H 0.139 0.861 37 H 0.137 0.863 38 H 0.121 0.879 39 H 0.127 0.873 40 H 0.134 0.866 41 H 0.099 0.901 42 H 0.086 0.914 43 H 0.098 0.902 44 H 0.085 0.915 45 H 0.071 0.929 46 H 0.082 0.918 47 H 0.080 0.920 48 H 0.108 0.892 49 H 0.103 0.897 50 H 0.112 0.888 51 H 0.080 0.920 52 H 0.123 0.877 53 H 0.085 0.915 54 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -3.304 -5.808 0.558 6.705 hybrid contribution 0.818 0.349 0.323 0.946 sum -2.485 -5.459 0.881 6.063 Atomic orbital electron populations 1.23408 0.76059 1.05783 1.02586 1.86052 1.23688 1.26270 1.87932 1.18819 0.91667 0.84887 0.92741 1.21364 1.01628 0.91211 1.11559 1.20899 0.92305 0.98850 0.94849 1.18819 0.93041 0.92873 1.11861 1.24759 1.04464 1.00920 0.88582 1.86469 1.77423 1.43703 1.29437 0.85230 0.77744 0.76143 0.79980 1.18341 1.17605 1.17632 1.18541 0.81869 0.93092 0.93356 1.86199 1.15266 1.31722 1.88056 1.22875 0.88988 0.86426 1.06272 1.20520 0.88553 0.85230 0.76009 1.90730 1.80531 1.23057 1.50256 1.48142 1.06310 1.06853 1.72491 1.21805 1.01917 0.79867 0.98565 1.26573 1.19645 1.05917 0.99935 0.78714 0.66485 0.64344 0.65863 1.26707 1.02737 1.01210 1.20380 1.21881 0.98308 0.98371 0.97461 1.22072 0.98660 1.02120 0.93708 1.26719 1.08712 1.12252 1.01467 1.26909 1.05643 1.20427 0.99737 1.21410 0.78605 1.02637 0.97899 1.20562 0.93347 0.97426 1.15589 0.91332 0.91527 0.86289 0.82504 0.83683 0.91660 0.76021 0.86130 0.86291 0.87897 0.87291 0.86589 0.90068 0.91439 0.90161 0.91509 0.92871 0.91790 0.92029 0.89189 0.89727 0.88790 0.92042 0.87713 0.91455 0.82489 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.33 -0.64 10.50 -92.34 -0.97 -1.61 16 3 C 0.17 0.64 6.68 22.49 0.15 0.79 16 4 C -0.24 -0.58 9.04 22.38 0.20 -0.38 16 5 C -0.05 -0.24 8.65 22.24 0.19 -0.04 16 6 C -0.16 -1.37 5.31 -19.75 -0.10 -1.47 16 7 C -0.08 -0.54 2.36 71.23 0.17 -0.37 16 8 O -0.56 -4.87 12.86 -148.98 -1.92 -6.78 16 9 Si 0.99 2.20 25.49 68.60 1.75 3.95 16 10 H -0.26 -0.64 7.11 99.48 0.71 0.07 16 11 H -0.25 -0.63 7.11 99.48 0.71 0.08 16 12 H -0.25 -0.63 6.73 99.48 0.67 0.04 16 13 C 0.18 1.47 6.66 22.49 0.15 1.62 16 14 O -0.30 -3.03 9.00 -73.36 -0.66 -3.69 16 15 C 0.03 0.06 3.52 71.24 0.25 0.31 16 16 C 0.51 3.37 7.71 87.66 0.68 4.04 16 17 O -0.57 -9.74 15.76 16.01 0.25 -9.49 16 18 N -0.60 0.33 2.56 -817.58 -2.09 -1.76 16 19 C 0.10 -0.82 5.75 86.71 0.50 -0.32 16 20 C -0.43 3.86 5.19 72.29 0.38 4.23 16 21 Si 1.06 -7.06 10.74 68.60 0.74 -6.33 16 22 C -0.43 1.07 5.84 72.91 0.43 1.50 16 23 C -0.12 0.22 6.10 31.78 0.19 0.42 16 24 C -0.13 0.37 5.97 32.04 0.19 0.56 16 25 C -0.41 2.54 5.95 73.16 0.44 2.98 16 26 C -0.44 0.70 5.21 72.49 0.38 1.08 16 27 C 0.12 0.01 5.93 86.91 0.52 0.53 16 28 C -0.25 -1.05 8.97 22.46 0.20 -0.85 16 29 H 0.07 -0.47 7.66 -2.39 -0.02 -0.49 16 30 H 0.07 -0.43 7.66 -2.39 -0.02 -0.45 16 31 H 0.12 -1.02 8.14 -2.38 -0.02 -1.04 16 32 H 0.16 -0.49 6.29 -2.91 -0.02 -0.51 16 33 H 0.15 0.15 4.88 -2.91 -0.01 0.14 16 34 H 0.07 0.50 7.83 -2.39 -0.02 0.48 16 35 H 0.39 0.12 8.74 -74.05 -0.65 -0.53 16 36 H 0.12 -0.47 7.47 -2.39 -0.02 -0.49 16 37 H 0.12 -0.42 7.03 -2.39 -0.02 -0.43 16 38 H 0.10 -1.16 5.75 -2.38 -0.01 -1.18 16 39 H 0.11 -1.34 8.08 -2.39 -0.02 -1.36 16 40 H 0.12 -1.42 7.97 -2.39 -0.02 -1.43 16 41 H 0.08 -0.63 7.97 -2.39 -0.02 -0.65 16 42 H 0.07 -0.04 8.03 -2.38 -0.02 -0.06 16 43 H 0.08 -0.24 8.03 -2.38 -0.02 -0.26 16 44 H 0.07 -0.19 8.14 -2.38 -0.02 -0.21 16 45 H 0.05 -0.01 8.14 -2.39 -0.02 -0.03 16 46 H 0.06 -0.16 8.14 -2.39 -0.02 -0.18 16 47 H 0.06 -0.16 8.14 -2.39 -0.02 -0.18 16 48 H 0.09 -0.70 8.04 -2.39 -0.02 -0.72 16 49 H 0.08 -0.59 8.04 -2.38 -0.02 -0.61 16 50 H 0.09 -0.27 7.97 -2.39 -0.02 -0.29 16 51 H 0.06 0.16 7.97 -2.39 -0.02 0.14 16 52 H 0.10 -0.57 8.08 -2.39 -0.02 -0.59 16 53 H 0.07 0.44 6.91 -2.39 -0.02 0.42 16 54 H 0.16 -0.18 6.30 -2.91 -0.02 -0.20 16 Total: 0.00 -24.67 419.89 4.09 -20.58 By element: Atomic # 1 Polarization: -11.49 SS G_CDS: 0.98 Total: -10.52 kcal Atomic # 6 Polarization: 9.63 SS G_CDS: 6.01 Total: 15.65 kcal Atomic # 7 Polarization: 0.33 SS G_CDS: -2.09 Total: -1.76 kcal Atomic # 8 Polarization: -18.28 SS G_CDS: -3.29 Total: -21.57 kcal Atomic # 14 Polarization: -4.87 SS G_CDS: 2.49 Total: -2.38 kcal Total: -24.67 4.09 -20.58 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15733048_4974312.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -116.996 kcal (2) G-P(sol) polarization free energy of solvation -24.672 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.669 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.092 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.581 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.577 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds