Wall clock time and date at job start Sun Mar 7 2021 05:06:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86292 * 109.47079 * 2 1 4 4 H 1.48500 * 109.47502 * 300.00592 * 3 2 1 5 5 H 1.48502 * 109.47289 * 60.00363 * 3 2 1 6 6 H 1.48508 * 109.47297 * 180.02562 * 3 2 1 7 7 C 1.50707 * 109.46644 * 240.00399 * 2 1 3 8 8 C 1.38249 * 119.93959 * 120.02054 * 7 2 1 9 9 C 1.38233 * 120.04380 * 179.97438 * 8 7 2 10 10 Br 1.89096 * 120.03722 * 179.97438 * 9 8 7 11 11 C 1.38795 * 119.92727 * 359.73068 * 9 8 7 12 12 O 1.35926 * 120.05906 * 180.29371 * 11 9 8 13 13 C 1.42900 * 117.00069 * 180.25142 * 12 11 9 14 14 C 1.50690 * 109.46915 * 180.02562 * 13 12 11 15 15 O 1.21279 * 120.00319 * 359.97438 * 14 13 12 16 16 N 1.34780 * 119.99950 * 180.02562 * 14 13 12 17 17 C 1.46400 * 118.75321 * 359.73035 * 16 14 13 18 18 C 1.53924 * 109.06328 * 253.45145 * 17 16 14 19 19 Si 1.85193 * 107.12337 * 308.56944 * 18 17 16 20 20 C 1.87461 * 111.51901 * 168.31737 * 19 18 17 21 21 C 1.55690 * 100.84330 * 114.80261 * 20 19 18 22 22 C 1.53776 * 111.39836 * 27.99205 * 21 20 19 23 23 C 1.56389 * 109.77576 * 312.17543 * 22 21 20 24 24 C 1.85201 * 110.14145 * 43.94020 * 19 18 17 25 25 C 1.46397 * 118.75733 * 179.97438 * 16 14 13 26 26 C 1.38715 * 119.88418 * 0.54724 * 11 9 8 27 27 C 1.38148 * 119.95325 * 359.44505 * 26 11 9 28 28 H 0.96697 * 114.00630 * 59.99627 * 1 2 3 29 29 H 1.08997 * 109.47411 * 120.00438 * 2 1 3 30 30 H 1.07997 * 119.97442 * 359.95422 * 8 7 2 31 31 H 1.09001 * 109.46730 * 300.00465 * 13 12 11 32 32 H 1.09003 * 109.47040 * 59.99673 * 13 12 11 33 33 H 1.09001 * 109.58487 * 13.19783 * 17 16 14 34 34 H 1.08993 * 109.59003 * 133.62599 * 17 16 14 35 35 H 1.09000 * 110.00207 * 189.12042 * 18 17 16 36 36 H 1.08998 * 109.84124 * 67.93436 * 18 17 16 37 37 H 1.09002 * 111.13922 * 232.69517 * 20 19 18 38 38 H 1.08995 * 111.14608 * 356.89970 * 20 19 18 39 39 H 1.09000 * 109.09701 * 267.47998 * 21 20 19 40 40 H 1.09003 * 109.10089 * 148.50590 * 21 20 19 41 41 H 1.09005 * 109.41382 * 192.08047 * 22 21 20 42 42 H 1.08996 * 109.41870 * 72.27510 * 22 21 20 43 43 H 1.09003 * 111.49425 * 281.94301 * 23 22 21 44 44 H 1.09004 * 111.49224 * 156.82719 * 23 22 21 45 45 H 1.08998 * 109.92105 * 196.56249 * 24 19 18 46 46 H 1.08998 * 109.92601 * 75.36546 * 24 19 18 47 47 H 1.08994 * 109.58862 * 226.37087 * 25 16 14 48 48 H 1.09000 * 109.58738 * 346.80505 * 25 16 14 49 49 H 1.08002 * 120.02748 * 179.72835 * 26 11 9 50 50 H 1.08001 * 119.96702 * 180.29890 * 27 26 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 1 1.5548 2.4565 -1.2124 5 1 1.5550 2.4564 1.2125 6 1 3.5350 1.7564 -0.0006 7 6 1.9312 -0.7104 -1.2306 8 6 2.7263 -0.0374 -2.1396 9 6 3.1885 -0.6870 -3.2688 10 35 4.2754 0.2339 -4.5124 11 6 2.8583 -2.0175 -3.4863 12 8 3.3163 -2.6606 -4.5927 13 6 2.9320 -4.0274 -4.7543 14 6 3.5295 -4.5700 -6.0269 15 8 4.2163 -3.8564 -6.7268 16 7 3.2997 -5.8481 -6.3878 17 6 2.4707 -6.6867 -5.5202 18 6 3.3721 -7.6946 -4.7847 19 14 4.4084 -8.5368 -6.0678 20 6 5.7932 -9.5316 -5.2888 21 6 5.3780 -10.9770 -5.6917 22 6 4.5709 -10.9846 -7.0006 23 6 3.4488 -9.8971 -6.9366 24 6 5.0610 -7.2946 -7.2765 25 6 3.8931 -6.3468 -7.6298 26 6 2.0556 -2.6882 -2.5752 27 6 1.5964 -2.0343 -1.4482 28 1 -0.3934 0.4417 -0.7650 29 1 1.7923 -0.5139 0.8899 30 1 2.9860 0.9966 -1.9675 31 1 3.2938 -4.6092 -3.9065 32 1 1.8453 -4.0958 -4.8046 33 1 1.9562 -6.0612 -4.7907 34 1 1.7396 -7.2254 -6.1229 35 1 2.7602 -8.4289 -4.2608 36 1 4.0123 -7.1696 -4.0758 37 1 6.7586 -9.2654 -5.7191 38 1 5.8016 -9.4124 -4.2054 39 1 4.7712 -11.4087 -4.8958 40 1 6.2750 -11.5825 -5.8221 41 1 4.1172 -11.9658 -7.1408 42 1 5.2356 -10.7708 -7.8375 43 1 2.6013 -10.2324 -6.3387 44 1 3.1336 -9.5893 -7.9336 45 1 5.4135 -7.8006 -8.1753 46 1 5.8753 -6.7284 -6.8242 47 1 3.1411 -6.8906 -8.2014 48 1 4.2673 -5.5090 -8.2181 49 1 1.7936 -3.7222 -2.7444 50 1 0.9754 -2.5577 -0.7363 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15733048_6201210.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:06:11 Heat of formation + Delta-G solvation = -104.599227 kcal Electronic energy + Delta-G solvation = -30706.002814 eV Core-core repulsion = 26482.341563 eV Total energy + Delta-G solvation = -4223.661251 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 427.077 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -41.81416 -40.92110 -39.23980 -37.47625 -37.18246 -36.30535 -33.54859 -33.02594 -32.17720 -31.09750 -30.26561 -29.87401 -29.12500 -26.44896 -25.16515 -24.49274 -24.25951 -23.44444 -22.42575 -21.18983 -20.34098 -19.71738 -18.58652 -18.03976 -17.61861 -17.57553 -16.81317 -16.63963 -16.31414 -16.18367 -16.08609 -15.76674 -15.69797 -15.22613 -15.06406 -15.00034 -14.54540 -14.50267 -14.42746 -14.32527 -14.00632 -13.79103 -13.67876 -13.55397 -13.42567 -12.85755 -12.69440 -12.53106 -12.49499 -12.32324 -12.30233 -12.27963 -12.15882 -12.11552 -11.80654 -11.70312 -11.51015 -11.05724 -10.94628 -10.63538 -10.55460 -10.51878 -10.45699 -10.02109 -9.84701 -9.31178 -0.07242 0.03412 0.70453 1.08363 1.28846 1.38983 1.42047 1.46000 1.54719 1.58573 1.68518 1.87232 2.22144 2.34416 2.44494 3.16097 3.36099 3.44094 3.56570 3.67374 3.75903 3.82177 3.83897 3.87211 3.97155 3.98495 3.99568 4.11864 4.19152 4.24073 4.26558 4.28519 4.40516 4.47850 4.51486 4.53032 4.56015 4.66810 4.72999 4.83351 4.93163 4.95558 4.97295 5.00925 5.05400 5.20703 5.22154 5.22655 5.34303 5.36259 5.38419 5.42043 5.95514 6.12717 6.45861 7.01737 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.072 4.072 3 Si 0.934 3.066 4 H -0.247 1.247 5 H -0.249 1.249 6 H -0.246 1.246 7 C -0.153 4.153 8 C -0.057 4.057 9 C -0.119 4.119 10 Br -0.025 7.025 11 C 0.162 3.838 12 O -0.275 6.275 13 C 0.036 3.964 14 C 0.515 3.485 15 O -0.505 6.505 16 N -0.613 5.613 17 C 0.112 3.888 18 C -0.434 4.434 19 Si 0.998 3.002 20 C -0.407 4.407 21 C -0.119 4.119 22 C -0.122 4.122 23 C -0.404 4.404 24 C -0.430 4.430 25 C 0.122 3.878 26 C -0.205 4.205 27 C -0.032 4.032 28 H 0.378 0.622 29 H 0.121 0.879 30 H 0.136 0.864 31 H 0.097 0.903 32 H 0.097 0.903 33 H 0.084 0.916 34 H 0.086 0.914 35 H 0.095 0.905 36 H 0.082 0.918 37 H 0.077 0.923 38 H 0.078 0.922 39 H 0.062 0.938 40 H 0.063 0.937 41 H 0.066 0.934 42 H 0.063 0.937 43 H 0.079 0.921 44 H 0.078 0.922 45 H 0.090 0.910 46 H 0.082 0.918 47 H 0.079 0.921 48 H 0.098 0.902 49 H 0.139 0.861 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.498 -5.165 2.258 6.634 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.183 4.183 3 Si 0.756 3.244 4 H -0.171 1.171 5 H -0.173 1.173 6 H -0.170 1.170 7 C -0.154 4.154 8 C -0.077 4.077 9 C -0.199 4.199 10 Br 0.061 6.939 11 C 0.113 3.887 12 O -0.186 6.186 13 C -0.042 4.042 14 C 0.301 3.699 15 O -0.379 6.379 16 N -0.349 5.349 17 C -0.011 4.011 18 C -0.521 4.521 19 Si 1.192 2.808 20 C -0.493 4.493 21 C -0.156 4.156 22 C -0.159 4.159 23 C -0.490 4.490 24 C -0.516 4.516 25 C 0.001 3.999 26 C -0.224 4.224 27 C -0.050 4.050 28 H 0.225 0.775 29 H 0.139 0.861 30 H 0.154 0.846 31 H 0.115 0.885 32 H 0.115 0.885 33 H 0.103 0.897 34 H 0.104 0.896 35 H 0.113 0.887 36 H 0.101 0.899 37 H 0.096 0.904 38 H 0.097 0.903 39 H 0.080 0.920 40 H 0.081 0.919 41 H 0.084 0.916 42 H 0.082 0.918 43 H 0.098 0.902 44 H 0.097 0.903 45 H 0.109 0.891 46 H 0.101 0.899 47 H 0.097 0.903 48 H 0.116 0.884 49 H 0.157 0.843 50 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -2.198 -3.774 1.779 4.716 hybrid contribution -0.456 -0.854 -0.083 0.972 sum -2.654 -4.629 1.696 5.599 Atomic orbital electron populations 1.86514 1.16990 1.81536 1.49244 1.24850 0.85176 1.10379 0.97880 0.85885 0.81005 0.75585 0.81877 1.17055 1.17277 1.16997 1.20232 1.01533 0.95634 0.98011 1.20885 0.95575 0.99647 0.91600 1.20971 1.06791 0.93283 0.98873 1.96810 1.65600 1.74716 1.56808 1.18639 0.92798 0.90715 0.86522 1.86285 1.69235 1.23923 1.39153 1.22681 1.01027 0.82429 0.98105 1.20004 0.81229 0.82237 0.86465 1.90790 1.37009 1.57155 1.52897 1.48020 1.51794 1.10733 1.24376 1.21429 0.92752 0.93469 0.93410 1.26596 1.08654 1.05764 1.11065 0.79560 0.67923 0.66278 0.67021 1.26490 1.11711 1.04954 1.06179 1.21844 0.99797 0.96741 0.97251 1.22020 0.96545 0.99627 0.97735 1.26663 1.03211 1.11333 1.07811 1.26671 1.02961 1.09794 1.12220 1.21345 0.94888 0.98886 0.84817 1.21295 1.03097 1.01312 0.96700 1.20939 0.95419 0.93148 0.95530 0.77510 0.86093 0.84630 0.88480 0.88503 0.89741 0.89587 0.88660 0.89922 0.90393 0.90331 0.91967 0.91864 0.91550 0.91782 0.90229 0.90273 0.89102 0.89918 0.90264 0.88359 0.84317 0.84232 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.46 12.77 -35.23 -0.45 0.01 16 2 C -0.07 0.10 2.82 36.01 0.10 0.20 16 3 Si 0.93 -0.72 25.07 -169.99 -4.26 -4.99 16 4 H -0.25 0.10 7.11 56.52 0.40 0.50 16 5 H -0.25 -0.14 7.11 56.52 0.40 0.27 16 6 H -0.25 0.01 7.11 56.52 0.40 0.41 16 7 C -0.15 0.06 5.39 -104.60 -0.56 -0.51 16 8 C -0.06 -0.06 8.40 -39.58 -0.33 -0.39 16 9 C -0.12 -0.31 6.24 -39.38 -0.25 -0.55 16 10 Br -0.02 -0.10 33.16 -68.01 -2.26 -2.35 16 11 C 0.16 0.29 6.68 -39.20 -0.26 0.02 16 12 O -0.27 -0.79 9.01 -39.42 -0.35 -1.14 16 13 C 0.04 -0.03 3.52 36.00 0.13 0.10 16 14 C 0.51 0.88 7.71 -10.99 -0.08 0.80 16 15 O -0.51 -3.26 15.76 -14.35 -0.23 -3.49 16 16 N -0.61 0.70 2.56 -172.35 -0.44 0.26 16 17 C 0.11 -0.47 5.76 -3.61 -0.02 -0.49 16 18 C -0.43 1.85 5.19 37.64 0.20 2.05 16 19 Si 1.00 -3.52 10.74 -169.99 -1.83 -5.35 16 20 C -0.41 0.74 5.84 38.59 0.23 0.97 16 21 C -0.12 0.16 6.10 -24.89 -0.15 0.01 16 22 C -0.12 0.20 5.97 -24.51 -0.15 0.05 16 23 C -0.40 1.15 5.94 38.98 0.23 1.38 16 24 C -0.43 0.76 5.21 37.95 0.20 0.95 16 25 C 0.12 -0.12 5.93 -3.31 -0.02 -0.14 16 26 C -0.20 0.19 9.04 -39.44 -0.36 -0.17 16 27 C -0.03 0.03 9.60 -39.60 -0.38 -0.35 16 28 H 0.38 -1.43 8.70 45.56 0.40 -1.04 16 29 H 0.12 -0.29 7.96 -51.93 -0.41 -0.70 16 30 H 0.14 0.03 4.87 -52.49 -0.26 -0.22 16 31 H 0.10 -0.32 7.48 -51.93 -0.39 -0.71 16 32 H 0.10 -0.34 7.01 -51.93 -0.36 -0.70 16 33 H 0.08 -0.49 5.75 -51.93 -0.30 -0.79 16 34 H 0.09 -0.47 8.08 -51.93 -0.42 -0.89 16 35 H 0.09 -0.50 7.97 -51.93 -0.41 -0.91 16 36 H 0.08 -0.32 7.97 -51.93 -0.41 -0.74 16 37 H 0.08 -0.10 8.03 -51.93 -0.42 -0.52 16 38 H 0.08 -0.15 8.03 -51.93 -0.42 -0.57 16 39 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 40 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 41 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 42 H 0.06 -0.11 8.14 -51.93 -0.42 -0.54 16 43 H 0.08 -0.25 8.04 -51.93 -0.42 -0.67 16 44 H 0.08 -0.24 8.04 -51.93 -0.42 -0.66 16 45 H 0.09 -0.21 7.97 -51.93 -0.41 -0.63 16 46 H 0.08 -0.02 7.97 -51.93 -0.41 -0.44 16 47 H 0.08 -0.24 8.08 -51.93 -0.42 -0.66 16 48 H 0.10 0.13 6.90 -51.93 -0.36 -0.23 16 49 H 0.14 -0.53 6.30 -52.49 -0.33 -0.86 16 50 H 0.14 -0.37 8.06 -52.49 -0.42 -0.79 16 LS Contribution 411.51 15.07 6.20 6.20 Total: 0.00 -8.30 411.51 -12.18 -20.49 By element: Atomic # 1 Polarization: -6.50 SS G_CDS: -7.09 Total: -13.59 kcal Atomic # 6 Polarization: 5.42 SS G_CDS: -1.49 Total: 3.94 kcal Atomic # 7 Polarization: 0.70 SS G_CDS: -0.44 Total: 0.26 kcal Atomic # 8 Polarization: -3.58 SS G_CDS: -1.03 Total: -4.62 kcal Atomic # 14 Polarization: -4.25 SS G_CDS: -6.09 Total: -10.33 kcal Atomic # 35 Polarization: -0.10 SS G_CDS: -2.26 Total: -2.35 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -8.30 -12.18 -20.49 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15733048_6201210.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.113 kcal (2) G-P(sol) polarization free energy of solvation -8.302 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.415 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.184 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.486 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.599 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds