Wall clock time and date at job start Sun Mar 7 2021 03:32:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34228 * 117.00245 * 2 1 4 4 O 1.20831 * 119.99742 * 359.97438 * 3 2 1 5 5 C 1.50693 * 120.00196 * 180.02562 * 3 2 1 6 6 C 1.53894 * 113.59542 * 279.18944 * 5 3 2 7 7 C 1.53318 * 86.83262 * 220.48866 * 6 5 3 8 8 C 1.53136 * 87.75800 * 25.01475 * 7 6 5 9 9 C 1.53733 * 114.69973 * 268.65720 * 7 6 5 10 10 C 1.55305 * 102.73782 * 251.57712 * 9 7 6 11 11 C 1.54966 * 101.66596 * 325.01754 * 10 9 7 12 12 N 1.46384 * 115.40300 * 142.16249 * 7 6 5 13 13 C 1.34772 * 125.80117 * 311.08241 * 12 7 6 14 14 O 1.21281 * 120.00113 * 355.85593 * 13 12 7 15 15 C 1.50700 * 120.00161 * 175.85870 * 13 12 7 16 16 C 1.53004 * 109.47042 * 294.88035 * 15 13 12 17 17 O 1.42901 * 109.47276 * 174.88255 * 15 13 12 18 18 C 1.35905 * 116.99770 * 205.31616 * 17 15 13 19 19 C 1.38730 * 120.05206 * 174.14747 * 18 17 15 20 20 C 1.38149 * 119.94294 * 179.74865 * 19 18 17 21 21 C 1.38264 * 120.05312 * 0.50389 * 20 19 18 22 22 C 1.50702 * 119.94420 * 179.74603 * 21 20 19 23 23 O 1.42902 * 109.47147 * 245.02754 * 22 21 20 24 24 Si 1.86305 * 109.46854 * 5.02803 * 22 21 20 25 25 C 1.38266 * 120.11123 * 359.77739 * 21 20 19 26 26 C 1.38140 * 120.05749 * 359.97158 * 25 21 20 27 27 H 1.08994 * 109.47329 * 60.00286 * 1 2 3 28 28 H 1.08996 * 109.47192 * 180.02562 * 1 2 3 29 29 H 1.09001 * 109.46780 * 300.00148 * 1 2 3 30 30 H 1.09007 * 112.83489 * 50.32851 * 5 3 2 31 31 H 1.08998 * 113.64782 * 334.96561 * 6 5 3 32 32 H 1.08999 * 113.64561 * 105.96460 * 6 5 3 33 33 H 1.09000 * 113.64275 * 220.48184 * 8 7 6 34 34 H 1.08997 * 113.64542 * 89.48730 * 8 7 6 35 35 H 1.08995 * 110.76090 * 9.88994 * 9 7 6 36 36 H 1.09003 * 110.76147 * 133.08162 * 9 7 6 37 37 H 1.09004 * 110.98797 * 83.11022 * 10 9 7 38 38 H 1.08990 * 110.99049 * 206.92289 * 10 9 7 39 39 H 1.08996 * 110.36621 * 155.51859 * 11 10 9 40 40 H 1.09000 * 110.36319 * 277.72659 * 11 10 9 41 41 H 1.08994 * 109.47294 * 54.88147 * 15 13 12 42 42 H 1.09000 * 109.47307 * 292.05204 * 16 15 13 43 43 H 1.08999 * 109.46909 * 52.05006 * 16 15 13 44 44 H 1.09002 * 109.47264 * 172.04982 * 16 15 13 45 45 H 1.08002 * 120.03024 * 0.02562 * 19 18 17 46 46 H 1.07997 * 119.97060 * 180.23571 * 20 19 18 47 47 H 1.08997 * 109.46599 * 125.02619 * 22 21 20 48 48 H 0.96699 * 113.99638 * 60.00499 * 23 22 21 49 49 H 1.48500 * 110.00013 * 58.67986 * 24 22 21 50 50 H 1.48496 * 109.99660 * 179.97438 * 24 22 21 51 51 H 1.08000 * 119.96911 * 179.97438 * 25 21 20 52 52 H 1.07998 * 120.02764 * 179.97438 * 26 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 6 4.1938 1.0818 1.3913 7 6 5.1694 2.2025 1.0132 8 6 4.1078 2.7149 0.0357 9 6 6.4739 1.7239 0.3556 10 6 7.5290 1.9715 1.4680 11 6 6.9892 3.2646 2.1297 12 7 5.5202 3.1219 2.0970 13 6 4.6501 3.7336 2.9246 14 8 3.4565 3.5991 2.7567 15 6 5.1601 4.5847 4.0588 16 6 5.9118 3.7042 5.0592 17 8 4.0580 5.2158 4.7139 18 6 4.3139 6.3771 5.3718 19 6 3.2717 7.1059 5.9260 20 6 3.5350 8.2834 6.5988 21 6 4.8349 8.7410 6.7109 22 6 5.1187 10.0288 7.4404 23 8 5.6357 10.9931 6.5211 24 14 3.5432 10.6743 8.1967 25 6 5.8747 8.0195 6.1543 26 6 5.6172 6.8388 5.4851 27 1 -0.3633 0.5138 -0.8899 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3633 0.5139 0.8900 30 1 4.0220 0.6566 -0.7742 31 1 3.5256 1.3423 2.2121 32 1 4.6720 0.1114 1.5246 33 1 4.5169 3.0523 -0.9166 34 1 3.4155 3.4312 0.4781 35 1 6.4154 0.6642 0.1077 36 1 6.6986 2.3150 -0.5323 37 1 7.5465 1.1465 2.1802 38 1 8.5174 2.1359 1.0390 39 1 7.3400 3.3390 3.1590 40 1 7.2994 4.1404 1.5597 41 1 5.8342 5.3463 3.6669 42 1 5.2082 3.0355 5.5551 43 1 6.6628 3.1156 4.5324 44 1 6.3999 4.3343 5.8028 45 1 2.2558 6.7507 5.8356 46 1 2.7244 8.8491 7.0337 47 1 5.8514 9.8471 8.2266 48 1 5.0351 11.2039 5.7932 49 1 2.9785 9.6673 9.1309 50 1 3.8097 11.9437 8.9196 51 1 6.8892 8.3793 6.2429 52 1 6.4298 6.2758 5.0502 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15736542_10157680.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:32:40 Heat of formation + Delta-G solvation = -111.422707 kcal Electronic energy + Delta-G solvation = -35493.137760 eV Core-core repulsion = 30812.539583 eV Total energy + Delta-G solvation = -4680.598177 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.181 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -42.60489 -41.69807 -41.08446 -39.74339 -38.73537 -37.72710 -37.16508 -36.78329 -33.72646 -32.35135 -32.05091 -31.35194 -29.72785 -28.07132 -27.02630 -26.83443 -26.05012 -24.93902 -24.24220 -23.30884 -22.56962 -21.91902 -20.96646 -19.64304 -19.30159 -18.81572 -18.25845 -18.04107 -17.93718 -17.49595 -17.14091 -16.97135 -16.69970 -16.39655 -16.10478 -15.98889 -15.70666 -15.54307 -15.35995 -15.02975 -14.74910 -14.52878 -14.47747 -14.28279 -14.25644 -14.15298 -13.81363 -13.79447 -13.46380 -13.43886 -13.28469 -13.23235 -13.00753 -12.87103 -12.35008 -12.24560 -12.18625 -12.11223 -11.98589 -11.94635 -11.91806 -11.87132 -11.71411 -11.45572 -11.37521 -10.78532 -10.42389 -10.08456 -9.77217 -9.27058 -5.00812 0.20614 0.28350 1.03060 1.30995 1.32694 1.33429 1.62136 1.69821 1.94691 2.36199 2.61221 3.11321 3.24644 3.29884 3.49333 3.51882 3.54955 3.58599 3.70048 3.71400 3.76807 3.82448 3.88200 3.90449 4.08949 4.13199 4.19514 4.20926 4.23139 4.29877 4.38992 4.42147 4.51130 4.53958 4.56428 4.57714 4.60803 4.64513 4.73295 4.77729 4.84634 4.93070 4.95449 4.96913 5.06340 5.11242 5.14558 5.19594 5.24876 5.27604 5.35702 5.44346 5.48004 5.65059 6.22744 6.35764 6.61873 6.77197 6.95779 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.361 6.361 3 C 0.464 3.536 4 O -0.542 6.542 5 C -0.099 4.099 6 C -0.122 4.122 7 C 0.149 3.851 8 C -0.131 4.131 9 C -0.105 4.105 10 C -0.124 4.124 11 C 0.073 3.927 12 N -0.598 5.598 13 C 0.525 3.475 14 O -0.559 6.559 15 C 0.070 3.930 16 C -0.176 4.176 17 O -0.314 6.314 18 C 0.118 3.882 19 C -0.162 4.162 20 C -0.074 4.074 21 C -0.161 4.161 22 C -0.062 4.062 23 O -0.555 6.555 24 Si 0.762 3.238 25 C -0.055 4.055 26 C -0.207 4.207 27 H 0.062 0.938 28 H 0.134 0.866 29 H 0.051 0.949 30 H 0.166 0.834 31 H 0.060 0.940 32 H 0.113 0.887 33 H 0.099 0.901 34 H 0.066 0.934 35 H 0.109 0.891 36 H 0.098 0.902 37 H 0.084 0.916 38 H 0.112 0.888 39 H 0.102 0.898 40 H 0.089 0.911 41 H 0.121 0.879 42 H 0.058 0.942 43 H 0.110 0.890 44 H 0.091 0.909 45 H 0.132 0.868 46 H 0.150 0.850 47 H 0.110 0.890 48 H 0.395 0.605 49 H -0.289 1.289 50 H -0.298 1.298 51 H 0.142 0.858 52 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.887 -3.808 -3.056 10.140 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.278 6.278 3 C 0.308 3.692 4 O -0.431 6.431 5 C -0.118 4.118 6 C -0.160 4.160 7 C 0.063 3.937 8 C -0.169 4.169 9 C -0.143 4.143 10 C -0.162 4.162 11 C -0.047 4.047 12 N -0.331 5.331 13 C 0.313 3.687 14 O -0.437 6.437 15 C 0.011 3.989 16 C -0.233 4.233 17 O -0.227 6.227 18 C 0.073 3.927 19 C -0.180 4.180 20 C -0.092 4.092 21 C -0.161 4.161 22 C -0.173 4.173 23 O -0.363 6.363 24 Si 0.669 3.331 25 C -0.073 4.073 26 C -0.226 4.226 27 H 0.080 0.920 28 H 0.152 0.848 29 H 0.070 0.930 30 H 0.183 0.817 31 H 0.079 0.921 32 H 0.132 0.868 33 H 0.118 0.882 34 H 0.085 0.915 35 H 0.127 0.873 36 H 0.117 0.883 37 H 0.103 0.897 38 H 0.130 0.870 39 H 0.120 0.880 40 H 0.107 0.893 41 H 0.138 0.862 42 H 0.077 0.923 43 H 0.128 0.872 44 H 0.109 0.891 45 H 0.150 0.850 46 H 0.167 0.833 47 H 0.127 0.873 48 H 0.245 0.755 49 H -0.216 1.216 50 H -0.226 1.226 51 H 0.160 0.840 52 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 7.876 -3.451 -1.965 8.820 hybrid contribution -0.543 -0.064 0.268 0.609 sum 7.332 -3.515 -1.697 8.306 Atomic orbital electron populations 1.23508 0.75291 1.05696 1.02086 1.86499 1.24598 1.32978 1.83691 1.24235 0.93044 0.80960 0.70928 1.90680 1.68073 1.37817 1.46541 1.22563 0.85445 1.01244 1.02565 1.23232 0.97731 1.00910 0.94130 1.22106 0.95626 0.89078 0.86870 1.23315 0.97865 0.94832 1.00933 1.22540 0.89324 1.03923 0.98471 1.22846 0.99565 0.96265 0.97536 1.23080 0.77049 1.00742 1.03879 1.48271 1.08449 1.44996 1.31433 1.20245 0.85654 0.80192 0.82610 1.90779 1.17474 1.62557 1.72851 1.22321 0.88114 0.96042 0.92465 1.22497 1.00924 1.00547 0.99302 1.86195 1.36552 1.35049 1.64951 1.19297 0.94548 0.85522 0.93314 1.20591 0.98823 0.96132 1.02484 1.20967 0.96380 0.94936 0.96885 1.20352 0.93616 0.98844 1.03316 1.24987 1.09303 0.87491 0.95496 1.86459 1.48290 1.59862 1.41668 0.93815 0.79221 0.76651 0.83372 1.21007 0.99829 0.92475 0.93994 1.21506 0.95302 0.99923 1.05819 0.91950 0.84768 0.93020 0.81673 0.92142 0.86818 0.88244 0.91537 0.87268 0.88336 0.89688 0.86979 0.88006 0.89329 0.86199 0.92259 0.87213 0.89068 0.85002 0.83308 0.87273 0.75548 1.21603 1.22590 0.84038 0.82909 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.11 10.56 113.37 1.20 1.30 16 2 O -0.36 -2.81 10.57 -51.39 -0.54 -3.35 16 3 C 0.46 4.96 7.48 71.23 0.53 5.49 16 4 O -0.54 -10.44 15.65 21.95 0.34 -10.09 16 5 C -0.10 -0.20 4.06 -10.94 -0.04 -0.25 16 6 C -0.12 -0.17 6.68 31.00 0.21 0.03 16 7 C 0.15 -0.27 1.34 4.02 0.01 -0.27 16 8 C -0.13 -0.52 6.54 30.94 0.20 -0.32 16 9 C -0.10 1.12 6.08 31.63 0.19 1.31 16 10 C -0.12 1.63 7.09 32.06 0.23 1.86 16 11 C 0.07 -0.72 6.51 86.84 0.56 -0.16 16 12 N -0.60 0.46 3.16 -766.32 -2.42 -1.96 16 13 C 0.52 3.71 6.87 87.66 0.60 4.31 16 14 O -0.56 -10.22 13.71 15.96 0.22 -10.00 16 15 C 0.07 0.13 2.03 29.85 0.06 0.19 16 16 C -0.18 0.65 9.00 71.98 0.65 1.30 16 17 O -0.31 -2.93 9.34 -73.49 -0.69 -3.62 16 18 C 0.12 0.68 6.60 22.50 0.15 0.83 16 19 C -0.16 -0.86 9.99 22.37 0.22 -0.63 16 20 C -0.07 -0.11 8.66 22.25 0.19 0.09 16 21 C -0.16 -0.14 5.35 -19.85 -0.11 -0.25 16 22 C -0.06 0.02 2.80 71.24 0.20 0.22 16 23 O -0.55 -0.09 12.83 -148.98 -1.91 -2.00 16 24 Si 0.76 -0.67 29.80 68.60 2.04 1.38 16 25 C -0.06 -0.02 9.68 22.25 0.22 0.19 16 26 C -0.21 -0.13 8.34 22.36 0.19 0.06 16 27 H 0.06 0.25 8.13 -2.39 -0.02 0.23 16 28 H 0.13 -0.41 8.14 -2.39 -0.02 -0.43 16 29 H 0.05 0.32 8.13 -2.39 -0.02 0.30 16 30 H 0.17 -1.00 8.14 -2.38 -0.02 -1.02 16 31 H 0.06 0.62 6.64 -2.39 -0.02 0.61 16 32 H 0.11 -0.51 8.01 -2.39 -0.02 -0.53 16 33 H 0.10 -0.06 8.01 -2.39 -0.02 -0.08 16 34 H 0.07 0.97 5.90 -2.39 -0.01 0.96 16 35 H 0.11 -1.49 7.85 -2.39 -0.02 -1.51 16 36 H 0.10 -1.20 8.01 -2.39 -0.02 -1.22 16 37 H 0.08 -1.12 8.14 -2.39 -0.02 -1.14 16 38 H 0.11 -1.85 8.14 -2.39 -0.02 -1.86 16 39 H 0.10 -1.34 4.95 -2.39 -0.01 -1.36 16 40 H 0.09 -1.03 8.14 -2.39 -0.02 -1.05 16 41 H 0.12 -0.42 6.26 -2.39 -0.01 -0.43 16 42 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 43 H 0.11 -1.01 5.13 -2.39 -0.01 -1.02 16 44 H 0.09 -0.55 6.87 -2.39 -0.02 -0.57 16 45 H 0.13 0.70 8.06 -2.91 -0.02 0.68 16 46 H 0.15 -0.44 4.90 -2.91 -0.01 -0.45 16 47 H 0.11 0.03 7.96 -2.39 -0.02 0.01 16 48 H 0.39 -2.89 8.70 -74.06 -0.64 -3.53 16 49 H -0.29 -1.28 7.11 99.48 0.71 -0.57 16 50 H -0.30 -1.91 7.11 99.48 0.71 -1.20 16 51 H 0.14 -0.33 8.06 -2.91 -0.02 -0.35 16 52 H 0.15 -0.77 5.33 -2.91 -0.02 -0.78 16 Total: 0.00 -33.47 410.69 2.86 -30.62 By element: Atomic # 1 Polarization: -16.64 SS G_CDS: 0.36 Total: -16.29 kcal Atomic # 6 Polarization: 9.86 SS G_CDS: 5.45 Total: 15.32 kcal Atomic # 7 Polarization: 0.46 SS G_CDS: -2.42 Total: -1.96 kcal Atomic # 8 Polarization: -26.49 SS G_CDS: -2.58 Total: -29.07 kcal Atomic # 14 Polarization: -0.67 SS G_CDS: 2.04 Total: 1.38 kcal Total: -33.47 2.86 -30.62 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_10157680.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.805 kcal (2) G-P(sol) polarization free energy of solvation -33.474 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.279 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.857 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.618 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.423 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds