Wall clock time and date at job start Sun Mar 7 2021 03:32:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34229 * 117.00007 * 2 1 4 4 O 1.20825 * 120.00278 * 359.97438 * 3 2 1 5 5 C 1.50693 * 120.00046 * 180.27725 * 3 2 1 6 6 C 1.53900 * 113.59500 * 278.91609 * 5 3 2 7 7 C 1.53316 * 86.83462 * 220.49201 * 6 5 3 8 8 C 1.53142 * 87.75966 * 25.01022 * 7 6 5 9 9 C 1.53749 * 114.69650 * 268.65807 * 7 6 5 10 10 C 1.55300 * 102.73327 * 251.57910 * 9 7 6 11 11 C 1.54974 * 101.66434 * 325.01059 * 10 9 7 12 12 N 1.46379 * 115.40974 * 142.16305 * 7 6 5 13 13 C 1.34777 * 125.79736 * 311.06359 * 12 7 6 14 14 O 1.21690 * 120.00105 * 358.88481 * 13 12 7 15 15 C 1.46684 * 119.99946 * 178.89236 * 13 12 7 16 16 C 1.37872 * 126.23304 * 8.10862 * 15 13 12 17 17 C 1.39832 * 107.08295 * 179.84802 * 16 15 13 18 18 C 1.35449 * 107.86545 * 0.42181 * 17 16 15 19 19 C 1.50703 * 125.56182 * 179.77831 * 18 17 16 20 20 O 1.42895 * 109.47120 * 149.95931 * 19 18 17 21 21 Si 1.86296 * 109.47440 * 29.95195 * 19 18 17 22 22 N 1.35531 * 108.87427 * 359.73662 * 18 17 16 23 23 C 1.46493 * 125.67896 * 180.02562 * 22 18 17 24 24 H 1.09009 * 109.47138 * 60.00201 * 1 2 3 25 25 H 1.08993 * 109.47325 * 179.97438 * 1 2 3 26 26 H 1.09002 * 109.47419 * 300.00381 * 1 2 3 27 27 H 1.09001 * 112.84276 * 50.05129 * 5 3 2 28 28 H 1.09000 * 113.64303 * 334.96442 * 6 5 3 29 29 H 1.09000 * 113.64686 * 105.96478 * 6 5 3 30 30 H 1.08999 * 113.64404 * 220.48901 * 8 7 6 31 31 H 1.09003 * 113.64222 * 89.49113 * 8 7 6 32 32 H 1.08998 * 110.75389 * 9.88746 * 9 7 6 33 33 H 1.08994 * 110.75496 * 133.08083 * 9 7 6 34 34 H 1.08991 * 110.99403 * 83.10696 * 10 9 7 35 35 H 1.09004 * 110.98714 * 206.88991 * 10 9 7 36 36 H 1.09005 * 110.35511 * 155.52789 * 11 10 9 37 37 H 1.08992 * 110.36400 * 277.83543 * 11 10 9 38 38 H 1.07997 * 126.45427 * 359.96907 * 16 15 13 39 39 H 1.08001 * 126.06605 * 180.17917 * 17 16 15 40 40 H 1.09002 * 109.46536 * 269.95346 * 19 18 17 41 41 H 0.96698 * 114.00230 * 180.02562 * 20 19 18 42 42 H 1.48502 * 110.00050 * 298.68678 * 21 19 18 43 43 H 1.48504 * 109.99986 * 60.00332 * 21 19 18 44 44 H 1.08998 * 109.47613 * 275.54645 * 23 22 18 45 45 H 1.09001 * 109.47144 * 35.55132 * 23 22 18 46 46 H 1.09011 * 109.47212 * 155.54727 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2094 -0.0005 5 6 3.5663 1.2749 -0.0063 6 6 4.1989 1.0858 1.3839 7 6 5.1730 2.2055 0.9992 8 6 4.1078 2.7151 0.0240 9 6 6.4752 1.7250 0.3381 10 6 7.5343 1.9757 1.4460 11 6 6.9968 3.2707 2.1060 12 7 5.5278 3.1278 2.0790 13 6 4.6605 3.7421 2.9079 14 8 3.4639 3.5629 2.7781 15 6 5.1591 4.6267 3.9665 16 6 6.4625 5.0441 4.1330 17 6 6.4875 5.8741 5.2581 18 6 5.2286 5.9401 5.7538 19 6 4.8052 6.7243 6.9690 20 8 3.4480 7.1443 6.8158 21 14 5.9006 8.2196 7.1560 22 7 4.4119 5.1865 4.9780 23 6 2.9733 4.9993 5.1817 24 1 -0.3634 0.5138 -0.8901 25 1 -0.3633 -1.0276 -0.0005 26 1 -0.3634 0.5139 0.8899 27 1 4.0193 0.6546 -0.7797 28 1 3.5335 1.3486 2.2063 29 1 4.6775 0.1157 1.5181 30 1 4.5135 3.0497 -0.9308 31 1 3.4171 3.4326 0.4669 32 1 6.4157 0.6645 0.0933 33 1 6.6965 2.3137 -0.5522 34 1 7.5543 1.1528 2.1604 35 1 8.5213 2.1383 1.0130 36 1 7.3515 3.3479 3.1338 37 1 7.3034 4.1447 1.5314 38 1 7.3050 4.7812 3.5106 39 1 7.3570 6.3709 5.6626 40 1 4.8933 6.0962 7.8555 41 1 3.1079 7.6560 7.5624 42 1 7.3108 7.7953 7.3480 43 1 5.7896 9.0841 5.9537 44 1 2.8095 4.1985 5.9027 45 1 2.5366 5.9237 5.5598 46 1 2.5033 4.7366 4.2338 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15736542_10803936.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:32:52 Heat of formation + Delta-G solvation = -45.855237 kcal Electronic energy + Delta-G solvation = -30484.867110 eV Core-core repulsion = 26344.132193 eV Total energy + Delta-G solvation = -4140.734917 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.161 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.75611 -42.06953 -40.85242 -38.87361 -37.77981 -37.49483 -36.63919 -33.90387 -32.80439 -31.34345 -29.66091 -28.18398 -27.44733 -26.91676 -26.83860 -25.37260 -23.82236 -22.48378 -22.13714 -21.09154 -20.21777 -19.34520 -18.61488 -18.48740 -17.86148 -17.75243 -17.24725 -17.05540 -16.95561 -16.42411 -16.20306 -15.74159 -15.60216 -15.21519 -14.97003 -14.81830 -14.78379 -14.43287 -14.11315 -13.94728 -13.86307 -13.61044 -13.59969 -13.39014 -13.25758 -13.12804 -13.02510 -12.84118 -12.59722 -12.26529 -12.01577 -11.96855 -11.90271 -11.85463 -11.63579 -11.59202 -11.12795 -10.78686 -10.56608 -9.76033 -9.63241 -9.03507 -5.04086 0.45617 1.11694 1.35651 1.51405 1.60799 1.72107 1.88547 2.03853 2.32177 2.38577 3.05953 3.20908 3.28966 3.34170 3.54442 3.57488 3.64305 3.77325 3.89323 3.98593 4.06919 4.15000 4.24398 4.27492 4.29345 4.35330 4.37233 4.43524 4.50156 4.57052 4.61083 4.65067 4.69596 4.70763 4.77297 4.78709 4.90888 4.95787 4.98958 5.01085 5.05654 5.11559 5.16911 5.51582 5.57112 5.76435 6.03757 6.19798 6.43048 6.46613 6.93260 7.18682 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.360 6.360 3 C 0.471 3.529 4 O -0.497 6.497 5 C -0.104 4.104 6 C -0.122 4.122 7 C 0.147 3.853 8 C -0.122 4.122 9 C -0.111 4.111 10 C -0.133 4.133 11 C 0.082 3.918 12 N -0.592 5.592 13 C 0.606 3.394 14 O -0.535 6.535 15 C -0.047 4.047 16 C -0.150 4.150 17 C -0.214 4.214 18 C 0.060 3.940 19 C -0.053 4.053 20 O -0.550 6.550 21 Si 0.716 3.284 22 N -0.385 5.385 23 C 0.054 3.946 24 H 0.063 0.937 25 H 0.102 0.898 26 H 0.063 0.937 27 H 0.127 0.873 28 H 0.101 0.899 29 H 0.086 0.914 30 H 0.082 0.918 31 H 0.112 0.888 32 H 0.090 0.910 33 H 0.086 0.914 34 H 0.080 0.920 35 H 0.090 0.910 36 H 0.096 0.904 37 H 0.077 0.923 38 H 0.161 0.839 39 H 0.144 0.856 40 H 0.080 0.920 41 H 0.387 0.613 42 H -0.253 1.253 43 H -0.253 1.253 44 H 0.069 0.931 45 H 0.109 0.891 46 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.405 -0.813 3.149 5.476 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.277 6.277 3 C 0.313 3.687 4 O -0.383 6.383 5 C -0.124 4.124 6 C -0.160 4.160 7 C 0.061 3.939 8 C -0.160 4.160 9 C -0.149 4.149 10 C -0.171 4.171 11 C -0.040 4.040 12 N -0.324 5.324 13 C 0.397 3.603 14 O -0.414 6.414 15 C -0.161 4.161 16 C -0.175 4.175 17 C -0.238 4.238 18 C -0.058 4.058 19 C -0.163 4.163 20 O -0.358 6.358 21 Si 0.615 3.385 22 N -0.056 5.056 23 C -0.086 4.086 24 H 0.082 0.918 25 H 0.120 0.880 26 H 0.081 0.919 27 H 0.145 0.855 28 H 0.120 0.880 29 H 0.104 0.896 30 H 0.100 0.900 31 H 0.130 0.870 32 H 0.109 0.891 33 H 0.105 0.895 34 H 0.099 0.901 35 H 0.108 0.892 36 H 0.114 0.886 37 H 0.095 0.905 38 H 0.178 0.822 39 H 0.162 0.838 40 H 0.098 0.902 41 H 0.236 0.764 42 H -0.178 1.178 43 H -0.177 1.177 44 H 0.088 0.912 45 H 0.127 0.873 46 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges 3.792 -0.500 2.289 4.458 hybrid contribution -0.370 -0.580 -0.205 0.718 sum 3.423 -1.080 2.084 4.150 Atomic orbital electron populations 1.23286 0.76199 1.03781 1.02651 1.86502 1.23538 1.33486 1.84132 1.23423 0.91563 0.81385 0.72325 1.90693 1.66823 1.36378 1.44384 1.22316 0.87769 1.00978 1.01292 1.23310 0.97898 0.99090 0.95750 1.21926 0.94512 0.89988 0.87466 1.23369 0.97571 0.95275 0.99802 1.22459 0.91607 1.02646 0.98146 1.22852 0.98987 0.97355 0.97936 1.22986 0.79637 0.98753 1.02662 1.47822 1.07083 1.45213 1.32283 1.16563 0.84912 0.78859 0.79949 1.90804 1.14679 1.63638 1.72243 1.19936 0.91720 1.07926 0.96491 1.21870 0.95111 1.00983 0.99579 1.20562 0.95816 1.07017 1.00383 1.20098 0.90670 0.98676 0.96374 1.24551 0.90917 1.05451 0.95335 1.86378 1.25884 1.75739 1.47793 0.95484 0.78083 0.77953 0.87001 1.43752 1.08758 1.33535 1.19604 1.22627 0.76562 1.04479 1.04921 0.91849 0.87976 0.91862 0.85516 0.88037 0.89571 0.89969 0.86970 0.89132 0.89498 0.90133 0.89152 0.88614 0.90487 0.82177 0.83812 0.90179 0.76400 1.17772 1.17690 0.91213 0.87269 0.87770 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.05 10.56 101.05 1.07 1.12 16 2 O -0.36 -1.28 10.57 -39.26 -0.41 -1.69 16 3 C 0.47 2.18 7.48 36.00 0.27 2.45 16 4 O -0.50 -3.96 15.65 -18.75 -0.29 -4.26 16 5 C -0.10 -0.15 4.06 -90.84 -0.37 -0.52 16 6 C -0.12 -0.17 6.68 -26.10 -0.17 -0.34 16 7 C 0.15 0.09 1.34 -131.26 -0.18 -0.09 16 8 C -0.12 -0.27 6.54 -26.19 -0.17 -0.44 16 9 C -0.11 0.29 6.08 -25.12 -0.15 0.13 16 10 C -0.13 0.42 7.09 -24.47 -0.17 0.24 16 11 C 0.08 -0.11 5.27 -2.39 -0.01 -0.12 16 12 N -0.59 -1.07 3.17 -157.65 -0.50 -1.57 16 13 C 0.61 2.97 7.47 -12.85 -0.10 2.87 16 14 O -0.54 -4.02 11.74 5.20 0.06 -3.96 16 15 C -0.05 -0.21 6.84 -81.98 -0.56 -0.77 16 16 C -0.15 -0.40 9.18 -39.12 -0.36 -0.76 16 17 C -0.21 -0.63 9.37 -39.98 -0.37 -1.01 16 18 C 0.06 0.20 6.18 -81.95 -0.51 -0.30 16 19 C -0.05 0.01 2.98 36.01 0.11 0.11 16 20 O -0.55 0.34 9.80 -35.23 -0.35 0.00 16 21 Si 0.72 -1.02 31.22 -169.99 -5.31 -6.33 16 22 N -0.38 -1.79 3.16 -115.62 -0.37 -2.16 16 23 C 0.05 0.20 10.35 59.84 0.62 0.82 16 24 H 0.06 0.09 8.13 -51.92 -0.42 -0.34 16 25 H 0.10 -0.13 8.14 -51.93 -0.42 -0.56 16 26 H 0.06 0.12 8.13 -51.93 -0.42 -0.30 16 27 H 0.13 -0.18 8.14 -51.93 -0.42 -0.60 16 28 H 0.10 0.45 6.54 -51.93 -0.34 0.11 16 29 H 0.09 -0.05 8.01 -51.93 -0.42 -0.47 16 30 H 0.08 0.04 8.01 -51.93 -0.42 -0.37 16 31 H 0.11 0.68 5.99 -51.93 -0.31 0.37 16 32 H 0.09 -0.34 7.85 -51.93 -0.41 -0.75 16 33 H 0.09 -0.28 8.01 -51.93 -0.42 -0.70 16 34 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 35 H 0.09 -0.41 8.14 -51.93 -0.42 -0.84 16 36 H 0.10 -0.17 5.31 -51.93 -0.28 -0.44 16 37 H 0.08 -0.16 8.02 -51.93 -0.42 -0.58 16 38 H 0.16 -0.04 4.71 -52.49 -0.25 -0.29 16 39 H 0.14 0.21 6.69 -52.49 -0.35 -0.14 16 40 H 0.08 -0.14 7.96 -51.93 -0.41 -0.56 16 41 H 0.39 -2.24 8.74 45.56 0.40 -1.84 16 42 H -0.25 -0.14 6.87 56.52 0.39 0.24 16 43 H -0.25 -0.67 7.11 56.52 0.40 -0.27 16 44 H 0.07 0.18 8.14 -51.93 -0.42 -0.24 16 45 H 0.11 0.30 5.47 -51.93 -0.28 0.01 16 46 H 0.10 0.55 5.89 -51.92 -0.31 0.25 16 LS Contribution 360.93 15.07 5.44 5.44 Total: 0.00 -10.94 360.93 -9.16 -20.10 By element: Atomic # 1 Polarization: -2.58 SS G_CDS: -6.37 Total: -8.95 kcal Atomic # 6 Polarization: 4.45 SS G_CDS: -1.06 Total: 3.38 kcal Atomic # 7 Polarization: -2.86 SS G_CDS: -0.86 Total: -3.73 kcal Atomic # 8 Polarization: -8.92 SS G_CDS: -0.99 Total: -9.91 kcal Atomic # 14 Polarization: -1.02 SS G_CDS: -5.31 Total: -6.33 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -10.94 -9.16 -20.10 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_10803936.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.760 kcal (2) G-P(sol) polarization free energy of solvation -10.936 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.696 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.160 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.095 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.855 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds