Wall clock time and date at job start Sun Mar 7 2021 03:32:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34235 * 116.99475 * 2 1 4 4 O 1.20823 * 120.00382 * 359.97438 * 3 2 1 5 5 C 1.50703 * 119.99822 * 180.02562 * 3 2 1 6 6 C 1.53894 * 113.59517 * 179.97438 * 5 3 2 7 7 C 1.53141 * 86.89559 * 139.54037 * 6 5 3 8 8 C 1.53145 * 87.72802 * 334.91697 * 7 6 5 9 9 C 1.53755 * 114.90590 * 218.68523 * 7 6 5 10 10 C 1.55303 * 102.82405 * 208.22795 * 9 7 6 11 11 C 1.54963 * 101.66587 * 34.75335 * 10 9 7 12 12 N 1.46375 * 115.38539 * 92.02708 * 7 6 5 13 13 C 1.34779 * 125.79471 * 308.72338 * 12 7 6 14 14 O 1.21691 * 120.00314 * 353.48701 * 13 12 7 15 15 C 1.46680 * 119.99643 * 173.49191 * 13 12 7 16 16 C 1.37877 * 126.23211 * 174.51308 * 15 13 12 17 17 C 1.50706 * 126.45468 * 359.96072 * 16 15 13 18 18 C 1.39829 * 107.08768 * 180.11902 * 16 15 13 19 19 C 1.50693 * 126.06984 * 179.84274 * 18 16 15 20 20 O 1.42895 * 109.47261 * 63.51082 * 19 18 16 21 21 Si 1.86305 * 109.47147 * 303.50767 * 19 18 16 22 22 C 1.35453 * 107.86146 * 359.58207 * 18 16 15 23 23 C 1.50706 * 125.56480 * 180.28699 * 22 18 16 24 24 N 1.35537 * 108.87279 * 0.25735 * 22 18 16 25 25 H 1.09001 * 109.46962 * 299.99845 * 1 2 3 26 26 H 1.08994 * 109.47118 * 60.00389 * 1 2 3 27 27 H 1.09002 * 109.46731 * 180.02562 * 1 2 3 28 28 H 1.09002 * 112.83382 * 48.86014 * 5 3 2 29 29 H 1.08999 * 113.64574 * 25.03706 * 6 5 3 30 30 H 1.09009 * 113.72448 * 254.04823 * 6 5 3 31 31 H 1.09006 * 113.64124 * 139.58593 * 8 7 6 32 32 H 1.09000 * 113.65240 * 270.57929 * 8 7 6 33 33 H 1.08998 * 110.91379 * 89.79486 * 9 7 6 34 34 H 1.09002 * 110.67884 * 326.55215 * 9 7 6 35 35 H 1.08993 * 110.98979 * 276.65650 * 10 9 7 36 36 H 1.09004 * 110.99039 * 152.84638 * 10 9 7 37 37 H 1.09003 * 110.36285 * 204.47651 * 11 10 9 38 38 H 1.08997 * 110.45409 * 82.21582 * 11 10 9 39 39 H 1.09002 * 109.46775 * 270.18561 * 17 16 15 40 40 H 1.08995 * 109.47230 * 30.18875 * 17 16 15 41 41 H 1.09005 * 109.46996 * 150.19479 * 17 16 15 42 42 H 1.09007 * 109.47140 * 183.51355 * 19 18 16 43 43 H 0.96699 * 114.00063 * 299.99526 * 20 19 18 44 44 H 1.48508 * 109.99491 * 58.68406 * 21 19 18 45 45 H 1.48499 * 109.99931 * 179.97438 * 21 19 18 46 46 H 1.08993 * 109.47390 * 94.70636 * 23 22 18 47 47 H 1.08994 * 109.46971 * 214.71109 * 23 22 18 48 48 H 1.08998 * 109.46705 * 334.70815 * 23 22 18 49 49 H 0.96998 * 125.67663 * 180.02562 * 24 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2751 -0.0006 6 6 4.1075 2.7157 -0.0011 7 6 5.1679 2.2291 0.9909 8 6 4.1918 1.1211 1.3971 9 6 5.5113 3.2242 2.1115 10 6 6.9824 2.8632 2.4542 11 6 7.5395 2.4656 1.0639 12 7 6.4230 1.7709 0.3932 13 6 6.5392 0.8718 -0.6041 14 8 5.5559 0.2779 -1.0057 15 6 7.8511 0.6090 -1.2054 16 6 8.1358 -0.3522 -2.1520 17 6 7.1604 -1.3270 -2.7600 18 6 9.5009 -0.2546 -2.4389 19 6 10.2654 -1.1093 -3.4166 20 8 9.7621 -0.8901 -4.7359 21 14 10.0606 -2.9049 -2.9641 22 6 10.0129 0.7485 -1.6863 23 6 11.4510 1.1990 -1.6876 24 7 9.0206 1.2814 -0.9324 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5137 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 4.0230 0.6374 -0.7575 29 1 3.4146 3.4432 0.4215 30 1 4.5182 3.0295 -0.9609 31 1 4.6698 0.1548 1.5581 32 1 3.5222 1.4043 2.2093 33 1 4.8652 3.0743 2.9765 34 1 5.4392 4.2502 1.7506 35 1 7.0270 2.0234 3.1475 36 1 7.5131 3.7269 2.8550 37 1 8.3918 1.7951 1.1745 38 1 7.8268 3.3534 0.5006 39 1 7.1309 -2.2349 -2.1575 40 1 6.1679 -0.8775 -2.7888 41 1 7.4772 -1.5737 -3.7734 42 1 11.3222 -0.8442 -3.3820 43 1 8.8253 -1.1057 -4.8404 44 1 8.6213 -3.2708 -2.9765 45 1 10.8094 -3.7584 -3.9212 46 1 11.5696 2.0343 -2.3777 47 1 11.7338 1.5145 -0.6833 48 1 12.0899 0.3740 -2.0026 49 1 9.1183 2.0148 -0.3052 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15736542_12297754.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:32:58 Heat of formation + Delta-G solvation = -45.912854 kcal Electronic energy + Delta-G solvation = -32873.752499 eV Core-core repulsion = 28577.477464 eV Total energy + Delta-G solvation = -4296.275035 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.177 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -43.02465 -42.24500 -41.10823 -38.95200 -37.99322 -37.71363 -36.73124 -33.93019 -33.30829 -32.32942 -29.85740 -29.30060 -28.31543 -27.62000 -27.01849 -26.43432 -25.24545 -23.69821 -22.53863 -21.62280 -21.10399 -20.16062 -19.63227 -19.01318 -18.27411 -17.87809 -17.74670 -17.48933 -17.31422 -16.79580 -16.59771 -16.03655 -15.92705 -15.56016 -15.36888 -15.01207 -14.91345 -14.56432 -14.45085 -14.33442 -14.15591 -14.08694 -13.80865 -13.68340 -13.58169 -13.52579 -13.40152 -13.17518 -13.10665 -12.99278 -12.73916 -12.60567 -12.39992 -12.21219 -12.02088 -11.90801 -11.82064 -11.49013 -11.45413 -11.22130 -10.76085 -10.54156 -9.94670 -9.53929 -8.96884 -4.86590 0.30935 1.04959 1.28451 1.55473 1.62949 1.72438 1.74943 2.01308 2.14000 2.19330 3.15304 3.32397 3.36201 3.50717 3.56559 3.58059 3.71973 3.83958 3.89682 3.94978 4.02713 4.11738 4.16878 4.21043 4.22103 4.30600 4.34606 4.40288 4.49248 4.53035 4.58428 4.60253 4.66192 4.67808 4.71219 4.81481 4.85003 4.85632 4.94593 4.98880 5.02645 5.06565 5.15812 5.20990 5.23941 5.27730 5.31474 5.40039 5.72074 5.87531 6.29157 6.45569 6.50294 6.63567 7.09877 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.367 6.367 3 C 0.468 3.532 4 O -0.543 6.543 5 C -0.152 4.152 6 C -0.118 4.118 7 C 0.150 3.850 8 C -0.111 4.111 9 C -0.114 4.114 10 C -0.121 4.121 11 C 0.078 3.922 12 N -0.598 5.598 13 C 0.603 3.397 14 O -0.542 6.542 15 C -0.069 4.069 16 C -0.076 4.076 17 C -0.096 4.096 18 C -0.221 4.221 19 C -0.038 4.038 20 O -0.550 6.550 21 Si 0.738 3.262 22 C 0.096 3.904 23 C -0.098 4.098 24 N -0.526 5.526 25 H 0.064 0.936 26 H 0.058 0.942 27 H 0.128 0.872 28 H 0.176 0.824 29 H 0.102 0.898 30 H 0.066 0.934 31 H 0.077 0.923 32 H 0.102 0.898 33 H 0.096 0.904 34 H 0.092 0.908 35 H 0.082 0.918 36 H 0.114 0.886 37 H 0.091 0.909 38 H 0.092 0.908 39 H 0.069 0.931 40 H 0.072 0.928 41 H 0.061 0.939 42 H 0.130 0.870 43 H 0.377 0.623 44 H -0.271 1.271 45 H -0.303 1.303 46 H 0.083 0.917 47 H 0.094 0.906 48 H 0.100 0.900 49 H 0.430 0.570 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.671 2.817 7.303 10.960 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.283 6.283 3 C 0.313 3.687 4 O -0.433 6.433 5 C -0.169 4.169 6 C -0.156 4.156 7 C 0.064 3.936 8 C -0.149 4.149 9 C -0.152 4.152 10 C -0.159 4.159 11 C -0.044 4.044 12 N -0.329 5.329 13 C 0.397 3.603 14 O -0.423 6.423 15 C -0.181 4.181 16 C -0.085 4.085 17 C -0.152 4.152 18 C -0.227 4.227 19 C -0.148 4.148 20 O -0.359 6.359 21 Si 0.643 3.357 22 C -0.024 4.024 23 C -0.155 4.155 24 N -0.128 5.128 25 H 0.082 0.918 26 H 0.077 0.923 27 H 0.146 0.854 28 H 0.191 0.809 29 H 0.120 0.880 30 H 0.085 0.915 31 H 0.095 0.905 32 H 0.120 0.880 33 H 0.115 0.885 34 H 0.111 0.889 35 H 0.101 0.899 36 H 0.132 0.868 37 H 0.109 0.891 38 H 0.110 0.890 39 H 0.088 0.912 40 H 0.091 0.909 41 H 0.079 0.921 42 H 0.147 0.853 43 H 0.226 0.774 44 H -0.196 1.196 45 H -0.231 1.231 46 H 0.102 0.898 47 H 0.113 0.887 48 H 0.119 0.881 49 H 0.275 0.725 Dipole moment (debyes) X Y Z Total from point charges 7.230 2.289 6.840 10.213 hybrid contribution -1.696 0.592 -0.946 2.030 sum 5.534 2.881 5.894 8.583 Atomic orbital electron populations 1.23522 0.75242 1.05539 1.02408 1.86553 1.24716 1.33486 1.83538 1.24406 0.92855 0.80835 0.70555 1.90609 1.68059 1.37265 1.47404 1.24079 0.85348 1.02625 1.04847 1.23206 0.97424 0.94792 1.00219 1.21416 0.83734 0.94701 0.93704 1.23101 0.97381 1.00152 0.94291 1.22562 0.98007 0.98235 0.96367 1.22816 0.94785 1.03624 0.94651 1.22929 0.89338 0.97349 0.94782 1.48114 1.08288 1.41544 1.35003 1.16934 0.86847 0.78327 0.78203 1.90265 1.36970 1.51028 1.63993 1.19683 0.86582 1.03594 1.08253 1.19820 0.94507 0.97227 0.96978 1.20540 0.98235 0.97315 0.99153 1.19452 0.93598 1.03665 1.06012 1.24387 1.00537 1.08462 0.81452 1.86572 1.30926 1.88778 1.29602 0.94427 0.80433 0.73214 0.87628 1.20783 0.92541 0.94838 0.94248 1.20677 0.86660 1.03514 1.04684 1.42414 1.06302 1.29331 1.34770 0.91759 0.92298 0.85404 0.80856 0.87957 0.91542 0.90456 0.88011 0.88501 0.88930 0.89913 0.86788 0.89065 0.89004 0.91246 0.90922 0.92063 0.85258 0.77376 1.19610 1.23062 0.89844 0.88732 0.88144 0.72495 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.11 10.56 113.37 1.20 1.31 16 2 O -0.37 -3.80 10.57 -51.46 -0.54 -4.34 16 3 C 0.47 5.47 7.48 71.24 0.53 6.00 16 4 O -0.54 -8.64 15.64 21.97 0.34 -8.29 16 5 C -0.15 -1.17 3.61 -10.94 -0.04 -1.21 16 6 C -0.12 -0.51 6.62 30.94 0.20 -0.30 16 7 C 0.15 -0.13 1.44 3.98 0.01 -0.12 16 8 C -0.11 -0.27 6.59 30.94 0.20 -0.07 16 9 C -0.11 0.83 6.30 31.64 0.20 1.03 16 10 C -0.12 1.36 7.09 32.06 0.23 1.59 16 11 C 0.08 -0.73 5.26 86.84 0.46 -0.27 16 12 N -0.60 0.79 3.17 -771.24 -2.44 -1.66 16 13 C 0.60 2.75 7.53 86.45 0.65 3.40 16 14 O -0.54 -5.49 10.36 -4.32 -0.04 -5.54 16 15 C -0.07 -0.18 6.83 40.35 0.28 0.09 16 16 C -0.08 -0.34 5.81 -19.56 -0.11 -0.45 16 17 C -0.10 -0.55 7.82 71.24 0.56 0.01 16 18 C -0.22 -0.20 4.63 -20.13 -0.09 -0.30 16 19 C -0.04 -0.02 2.85 71.23 0.20 0.18 16 20 O -0.55 -2.89 12.88 -148.98 -1.92 -4.81 16 21 Si 0.74 0.45 31.10 68.60 2.13 2.58 16 22 C 0.10 -0.34 7.13 41.34 0.29 -0.05 16 23 C -0.10 1.00 10.17 71.24 0.72 1.73 16 24 N -0.53 2.20 5.38 -171.92 -0.93 1.28 16 25 H 0.06 0.23 8.13 -2.39 -0.02 0.21 16 26 H 0.06 0.28 8.13 -2.39 -0.02 0.26 16 27 H 0.13 -0.23 8.14 -2.39 -0.02 -0.24 16 28 H 0.18 2.00 4.12 -77.94 -0.32 1.68 16 29 H 0.10 0.49 7.41 -2.39 -0.02 0.47 16 30 H 0.07 0.41 8.14 -2.38 -0.02 0.39 16 31 H 0.08 0.31 8.14 -2.38 -0.02 0.29 16 32 H 0.10 0.05 7.88 -2.39 -0.02 0.03 16 33 H 0.10 -0.79 7.79 -2.39 -0.02 -0.81 16 34 H 0.09 -0.77 8.11 -2.39 -0.02 -0.79 16 35 H 0.08 -0.87 8.14 -2.39 -0.02 -0.89 16 36 H 0.11 -1.73 8.14 -2.38 -0.02 -1.75 16 37 H 0.09 -1.08 6.24 -2.39 -0.01 -1.09 16 38 H 0.09 -1.14 7.84 -2.39 -0.02 -1.16 16 39 H 0.07 0.44 7.19 -2.39 -0.02 0.42 16 40 H 0.07 0.64 6.40 -2.39 -0.02 0.63 16 41 H 0.06 0.20 5.08 -2.38 -0.01 0.19 16 42 H 0.13 -0.46 6.43 -2.38 -0.02 -0.47 16 43 H 0.38 0.81 6.38 -74.06 -0.47 0.34 16 44 H -0.27 -1.32 5.20 99.48 0.52 -0.81 16 45 H -0.30 -2.33 7.11 99.48 0.71 -1.62 16 46 H 0.08 -0.83 8.14 -2.39 -0.02 -0.85 16 47 H 0.09 -1.34 8.14 -2.39 -0.02 -1.36 16 48 H 0.10 -1.18 6.84 -2.39 -0.02 -1.19 16 49 H 0.43 -4.38 5.34 -92.71 -0.50 -4.87 16 Total: 0.00 -22.86 375.40 1.66 -21.20 By element: Atomic # 1 Polarization: -12.57 SS G_CDS: -0.42 Total: -12.99 kcal Atomic # 6 Polarization: 7.08 SS G_CDS: 5.49 Total: 12.57 kcal Atomic # 7 Polarization: 2.99 SS G_CDS: -3.37 Total: -0.38 kcal Atomic # 8 Polarization: -20.82 SS G_CDS: -2.16 Total: -22.98 kcal Atomic # 14 Polarization: 0.45 SS G_CDS: 2.13 Total: 2.58 kcal Total: -22.86 1.66 -21.20 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_12297754.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.714 kcal (2) G-P(sol) polarization free energy of solvation -22.863 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.578 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.665 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.199 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.913 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds