Wall clock time and date at job start Sun Mar 7 2021 03:33:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34232 * 117.00171 * 2 1 4 4 O 1.20829 * 119.99424 * 359.97438 * 3 2 1 5 5 C 1.50693 * 120.00017 * 180.02562 * 3 2 1 6 6 C 1.53905 * 113.59421 * 179.97438 * 5 3 2 7 7 C 1.53153 * 86.89019 * 139.52742 * 6 5 3 8 8 C 1.53134 * 87.73425 * 334.92381 * 7 6 5 9 9 C 1.53740 * 114.76725 * 218.56277 * 7 6 5 10 10 C 1.55295 * 102.74055 * 251.59020 * 9 7 6 11 11 C 1.55229 * 101.55141 * 324.82168 * 10 9 7 12 12 N 1.46379 * 115.35585 * 92.05236 * 7 6 5 13 13 C 1.34773 * 125.80431 * 311.11207 * 12 7 6 14 14 O 1.21566 * 119.99642 * 7.78020 * 13 12 7 15 15 C 1.47693 * 120.00312 * 187.77899 * 13 12 7 16 16 C 1.39827 * 120.16625 * 190.02334 * 15 13 12 17 17 F 1.35096 * 120.11149 * 359.95515 * 16 15 13 18 18 C 1.38318 * 119.77508 * 179.97438 * 16 15 13 19 19 C 1.38207 * 120.12119 * 359.72405 * 18 16 15 20 20 C 1.38457 * 120.33720 * 0.55168 * 19 18 16 21 21 C 1.50701 * 119.89016 * 179.71749 * 20 19 18 22 22 O 1.42908 * 109.46570 * 119.72792 * 21 20 19 23 23 Si 1.86294 * 109.47213 * 359.73262 * 21 20 19 24 24 C 1.37856 * 120.21907 * 359.44952 * 20 19 18 25 25 H 1.08995 * 109.47586 * 300.00213 * 1 2 3 26 26 H 1.09008 * 109.47156 * 60.00702 * 1 2 3 27 27 H 1.09001 * 109.47280 * 180.02562 * 1 2 3 28 28 H 1.08997 * 112.84151 * 48.85344 * 5 3 2 29 29 H 1.09002 * 113.64325 * 25.02898 * 6 5 3 30 30 H 1.09000 * 113.72329 * 254.04152 * 6 5 3 31 31 H 1.09005 * 113.64085 * 139.57720 * 8 7 6 32 32 H 1.08996 * 113.64438 * 270.57232 * 8 7 6 33 33 H 1.09004 * 110.75316 * 9.90284 * 9 7 6 34 34 H 1.09000 * 110.75933 * 133.08287 * 9 7 6 35 35 H 1.08999 * 110.98874 * 83.10565 * 10 9 7 36 36 H 1.09002 * 110.99105 * 206.88586 * 10 9 7 37 37 H 1.09001 * 110.50991 * 278.16623 * 11 10 9 38 38 H 1.08996 * 110.33443 * 155.77515 * 11 10 9 39 39 H 1.08002 * 119.93809 * 180.02562 * 18 16 15 40 40 H 1.08001 * 119.83075 * 180.29412 * 19 18 16 41 41 H 1.08999 * 109.47129 * 239.72729 * 21 20 19 42 42 H 0.96698 * 114.00082 * 299.99981 * 22 21 20 43 43 H 1.48501 * 110.00286 * 58.67562 * 23 21 20 44 44 H 1.48498 * 110.00083 * 179.97438 * 23 21 20 45 45 H 1.07999 * 120.06263 * 180.25517 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 6 4.1077 2.7155 -0.0011 7 6 5.1678 2.2288 0.9912 8 6 4.1917 1.1209 1.3971 9 6 5.5107 3.2274 2.1087 10 6 6.9344 3.7066 1.7147 11 6 7.5422 2.4121 1.1112 12 7 6.4230 1.7710 0.3932 13 6 6.5376 0.9067 -0.6345 14 8 5.5463 0.5454 -1.2382 15 6 7.8676 0.3986 -1.0273 16 6 8.0206 -0.3269 -2.2128 17 9 6.9517 -0.5667 -3.0034 18 6 9.2700 -0.7986 -2.5731 19 6 10.3645 -0.5488 -1.7671 20 6 10.2176 0.1642 -0.5893 21 6 11.4169 0.4252 0.2851 22 8 11.6129 1.8347 0.4163 23 14 12.9281 -0.3425 -0.4879 24 6 8.9789 0.6408 -0.2167 25 1 -0.3634 0.5138 0.8899 26 1 -0.3634 0.5138 -0.8901 27 1 -0.3634 -1.0277 0.0005 28 1 4.0231 0.6371 -0.7573 29 1 3.4147 3.4431 0.4214 30 1 4.5184 3.0293 -0.9608 31 1 4.6697 0.1545 1.5581 32 1 3.5222 1.4041 2.2093 33 1 4.8089 4.0614 2.1102 34 1 5.5215 2.7320 3.0796 35 1 6.8866 4.5031 0.9722 36 1 7.4953 4.0272 2.5926 37 1 7.9097 1.7580 1.9020 38 1 8.3461 2.6587 0.4177 39 1 9.3912 -1.3589 -3.4884 40 1 11.3388 -0.9152 -2.0553 41 1 11.2506 -0.0117 1.2698 42 1 11.7669 2.2902 -0.4227 43 1 13.1473 0.2218 -1.8440 44 1 14.1178 -0.0915 0.3645 45 1 8.8679 1.2001 0.7004 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15736542_12335834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:33:07 Heat of formation + Delta-G solvation = -90.700659 kcal Electronic energy + Delta-G solvation = -32407.175490 eV Core-core repulsion = 27887.779343 eV Total energy + Delta-G solvation = -4519.396147 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.141 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -49.90101 -42.68483 -41.17980 -40.48878 -38.93444 -37.75407 -37.49471 -36.62975 -33.48913 -32.50194 -32.01299 -29.71903 -28.26827 -26.89659 -26.77693 -26.18296 -24.79991 -23.78388 -23.37251 -21.70529 -21.25070 -19.39653 -19.03601 -18.60896 -18.40546 -18.06355 -17.55073 -17.32013 -17.29954 -17.05432 -16.74764 -16.43774 -16.30916 -16.06861 -15.70382 -15.56439 -15.22259 -14.85825 -14.71073 -14.56113 -14.42678 -14.19863 -14.01846 -13.69252 -13.63778 -13.41383 -13.26453 -13.21906 -12.95355 -12.86932 -12.55993 -12.44523 -12.08529 -12.04498 -11.82210 -11.57857 -11.51680 -11.47541 -11.04915 -10.89876 -10.41062 -10.38677 -9.95986 -9.76156 -5.12151 -0.56621 -0.13631 1.08201 1.42477 1.43082 1.54409 1.60993 1.81819 2.00291 2.36606 2.94647 3.02845 3.12325 3.24841 3.32569 3.37859 3.44558 3.55457 3.63147 3.72175 3.77608 3.83354 3.96902 4.01383 4.18753 4.27444 4.28613 4.31318 4.34761 4.39058 4.45074 4.51635 4.63009 4.65605 4.69860 4.73398 4.75241 4.78343 4.82064 4.83227 4.90823 4.99659 5.04158 5.05448 5.35861 5.41816 5.53043 5.65209 6.18142 6.25395 6.99464 7.14209 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.357 6.357 3 C 0.470 3.530 4 O -0.515 6.515 5 C -0.144 4.144 6 C -0.116 4.116 7 C 0.142 3.858 8 C -0.121 4.121 9 C -0.116 4.116 10 C -0.134 4.134 11 C 0.087 3.913 12 N -0.591 5.591 13 C 0.579 3.421 14 O -0.509 6.509 15 C -0.173 4.173 16 C 0.169 3.831 17 F -0.111 7.111 18 C -0.158 4.158 19 C -0.059 4.059 20 C -0.141 4.141 21 C -0.072 4.072 22 O -0.528 6.528 23 Si 0.683 3.317 24 C -0.058 4.058 25 H 0.061 0.939 26 H 0.062 0.938 27 H 0.101 0.899 28 H 0.188 0.812 29 H 0.104 0.896 30 H 0.079 0.921 31 H 0.082 0.918 32 H 0.096 0.904 33 H 0.090 0.910 34 H 0.084 0.916 35 H 0.081 0.919 36 H 0.090 0.910 37 H 0.082 0.918 38 H 0.092 0.908 39 H 0.150 0.850 40 H 0.142 0.858 41 H 0.123 0.877 42 H 0.378 0.622 43 H -0.257 1.257 44 H -0.254 1.254 45 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.180 -1.522 2.862 6.978 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.273 6.273 3 C 0.314 3.686 4 O -0.403 6.403 5 C -0.161 4.161 6 C -0.154 4.154 7 C 0.057 3.943 8 C -0.160 4.160 9 C -0.154 4.154 10 C -0.172 4.172 11 C -0.035 4.035 12 N -0.324 5.324 13 C 0.370 3.630 14 O -0.387 6.387 15 C -0.177 4.177 16 C 0.148 3.852 17 F -0.089 7.089 18 C -0.177 4.177 19 C -0.077 4.077 20 C -0.141 4.141 21 C -0.182 4.182 22 O -0.335 6.335 23 Si 0.584 3.416 24 C -0.076 4.076 25 H 0.080 0.920 26 H 0.081 0.919 27 H 0.119 0.881 28 H 0.203 0.797 29 H 0.122 0.878 30 H 0.098 0.902 31 H 0.101 0.899 32 H 0.114 0.886 33 H 0.108 0.892 34 H 0.103 0.897 35 H 0.100 0.900 36 H 0.109 0.891 37 H 0.100 0.900 38 H 0.110 0.890 39 H 0.167 0.833 40 H 0.159 0.841 41 H 0.141 0.859 42 H 0.226 0.774 43 H -0.182 1.182 44 H -0.178 1.178 45 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges 6.102 -1.484 2.741 6.852 hybrid contribution -0.732 1.062 -0.530 1.394 sum 5.369 -0.422 2.211 5.822 Atomic orbital electron populations 1.23273 0.76590 1.03727 1.02469 1.86547 1.23223 1.33691 1.83875 1.23966 0.92112 0.81099 0.71455 1.90637 1.67328 1.36516 1.45847 1.23964 0.86695 1.02353 1.03088 1.23182 0.96461 0.95433 1.00320 1.21465 0.84054 0.94936 0.93847 1.23180 0.97405 0.99666 0.95749 1.22530 0.97452 0.98187 0.97218 1.22919 0.95938 0.96528 1.01798 1.22992 0.89792 0.94289 0.96382 1.47967 1.07429 1.44244 1.32721 1.17734 0.88244 0.77946 0.79040 1.90323 1.36789 1.59238 1.52351 1.19907 0.94632 1.05761 0.97352 1.17742 0.84173 0.95153 0.88108 1.91631 1.53843 1.91509 1.71884 1.21160 0.90581 1.03368 1.02557 1.21132 0.98672 0.95133 0.92721 1.20319 0.96024 1.01066 0.96701 1.25005 1.02207 0.86244 1.04754 1.86607 1.93176 1.18065 1.35614 0.94973 0.76689 0.91015 0.78952 1.22147 0.90152 0.95568 0.99760 0.91999 0.91922 0.88075 0.79694 0.87779 0.90204 0.89934 0.88572 0.89179 0.89699 0.90022 0.89115 0.89990 0.88988 0.83250 0.84122 0.85897 0.77449 1.18205 1.17838 0.81805 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.06 10.56 101.05 1.07 1.13 16 2 O -0.36 -1.68 10.57 -39.26 -0.41 -2.10 16 3 C 0.47 2.50 7.48 36.00 0.27 2.77 16 4 O -0.52 -3.83 15.64 -18.75 -0.29 -4.12 16 5 C -0.14 -0.50 3.61 -90.84 -0.33 -0.83 16 6 C -0.12 -0.25 6.36 -26.18 -0.17 -0.42 16 7 C 0.14 0.01 1.44 -131.35 -0.19 -0.18 16 8 C -0.12 -0.12 6.84 -26.19 -0.18 -0.30 16 9 C -0.12 0.28 6.30 -25.13 -0.16 0.12 16 10 C -0.13 0.46 7.10 -24.33 -0.17 0.29 16 11 C 0.09 -0.25 4.91 -2.25 -0.01 -0.26 16 12 N -0.59 0.01 3.17 -157.23 -0.50 -0.49 16 13 C 0.58 1.32 7.49 -12.40 -0.09 1.23 16 14 O -0.51 -2.61 10.99 5.31 0.06 -2.55 16 15 C -0.17 -0.13 5.85 -104.91 -0.61 -0.75 16 16 C 0.17 0.22 7.27 -38.96 -0.28 -0.06 16 17 F -0.11 -0.44 15.61 2.25 0.04 -0.40 16 18 C -0.16 0.22 10.01 -39.56 -0.40 -0.18 16 19 C -0.06 0.16 8.66 -39.51 -0.34 -0.18 16 20 C -0.14 0.36 5.38 -104.68 -0.56 -0.20 16 21 C -0.07 0.24 2.82 36.01 0.10 0.34 16 22 O -0.53 1.14 12.76 -35.23 -0.45 0.69 16 23 Si 0.68 -2.28 29.78 -169.99 -5.06 -7.34 16 24 C -0.06 0.10 7.85 -39.19 -0.31 -0.21 16 25 H 0.06 0.10 8.13 -51.93 -0.42 -0.33 16 26 H 0.06 0.13 8.13 -51.92 -0.42 -0.29 16 27 H 0.10 -0.07 8.14 -51.93 -0.42 -0.49 16 28 H 0.19 0.97 4.14 -56.57 -0.23 0.74 16 29 H 0.10 0.24 7.21 -51.93 -0.37 -0.14 16 30 H 0.08 0.26 8.14 -51.93 -0.42 -0.17 16 31 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 32 H 0.10 0.02 8.08 -51.93 -0.42 -0.40 16 33 H 0.09 -0.23 7.79 -51.93 -0.40 -0.63 16 34 H 0.08 -0.27 8.11 -51.93 -0.42 -0.69 16 35 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 36 H 0.09 -0.43 8.14 -51.93 -0.42 -0.85 16 37 H 0.08 -0.34 7.21 -51.93 -0.37 -0.71 16 38 H 0.09 -0.31 6.20 -51.93 -0.32 -0.63 16 39 H 0.15 -0.48 8.06 -52.49 -0.42 -0.90 16 40 H 0.14 -0.69 4.86 -52.49 -0.25 -0.95 16 41 H 0.12 -0.51 7.96 -51.93 -0.41 -0.92 16 42 H 0.38 -1.76 8.70 45.56 0.40 -1.36 16 43 H -0.26 0.36 7.10 56.52 0.40 0.77 16 44 H -0.25 -0.08 7.11 56.52 0.40 0.32 16 45 H 0.17 -0.51 3.43 -52.49 -0.18 -0.69 16 LS Contribution 361.38 15.07 5.45 5.45 Total: 0.00 -8.75 361.38 -9.13 -17.87 By element: Atomic # 1 Polarization: -3.74 SS G_CDS: -5.58 Total: -9.32 kcal Atomic # 6 Polarization: 4.67 SS G_CDS: -2.37 Total: 2.30 kcal Atomic # 7 Polarization: 0.01 SS G_CDS: -0.50 Total: -0.49 kcal Atomic # 8 Polarization: -6.97 SS G_CDS: -1.10 Total: -8.07 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.04 Total: -0.40 kcal Atomic # 14 Polarization: -2.28 SS G_CDS: -5.06 Total: -7.34 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -8.75 -9.13 -17.87 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_12335834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.828 kcal (2) G-P(sol) polarization free energy of solvation -8.747 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.575 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.126 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.872 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.701 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds