Wall clock time and date at job start Sun Mar 7 2021 03:33:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34236 * 116.99482 * 2 1 4 4 O 1.20816 * 120.00354 * 359.97438 * 3 2 1 5 5 C 1.50702 * 119.99580 * 180.02562 * 3 2 1 6 6 C 1.53900 * 113.59362 * 179.97438 * 5 3 2 7 7 C 1.53155 * 86.89269 * 139.53192 * 6 5 3 8 8 C 1.53144 * 87.73050 * 334.92606 * 7 6 5 9 9 C 1.53735 * 114.77060 * 218.57129 * 7 6 5 10 10 C 1.55581 * 102.76466 * 251.56601 * 9 7 6 11 11 C 1.54968 * 101.53577 * 325.04580 * 10 9 7 12 12 N 1.46374 * 115.36180 * 92.04404 * 7 6 5 13 13 C 1.34773 * 125.80393 * 311.17011 * 12 7 6 14 14 O 1.21550 * 120.00133 * 354.69067 * 13 12 7 15 15 C 1.47846 * 120.00195 * 174.68999 * 13 12 7 16 16 C 1.39541 * 120.14125 * 27.85420 * 15 13 12 17 17 C 1.38073 * 119.84548 * 179.97438 * 16 15 13 18 18 Br 1.89096 * 119.93703 * 179.97438 * 17 16 15 19 19 C 1.38423 * 120.12425 * 359.97438 * 17 16 15 20 20 C 1.38366 * 120.28307 * 359.97438 * 19 17 16 21 21 C 1.50698 * 119.92433 * 179.97438 * 20 19 17 22 22 O 1.42893 * 109.47010 * 119.99938 * 21 20 19 23 23 Si 1.86306 * 109.46945 * 0.02562 * 21 20 19 24 24 C 1.37949 * 120.15336 * 359.74346 * 20 19 17 25 25 H 1.09006 * 109.47017 * 299.99857 * 1 2 3 26 26 H 1.08998 * 109.47617 * 60.00032 * 1 2 3 27 27 H 1.09001 * 109.46645 * 180.02562 * 1 2 3 28 28 H 1.08994 * 112.83824 * 48.85950 * 5 3 2 29 29 H 1.08999 * 113.64289 * 25.03896 * 6 5 3 30 30 H 1.08994 * 113.72552 * 254.04224 * 6 5 3 31 31 H 1.08998 * 113.64668 * 139.57846 * 8 7 6 32 32 H 1.09008 * 113.64174 * 270.57280 * 8 7 6 33 33 H 1.08999 * 110.75850 * 9.87525 * 9 7 6 34 34 H 1.08999 * 110.75630 * 133.06875 * 9 7 6 35 35 H 1.09002 * 111.10488 * 206.97577 * 10 9 7 36 36 H 1.08998 * 110.99948 * 83.06828 * 10 9 7 37 37 H 1.09003 * 110.35946 * 277.76649 * 11 10 9 38 38 H 1.09003 * 110.36334 * 155.57378 * 11 10 9 39 39 H 1.08001 * 120.07510 * 359.97438 * 16 15 13 40 40 H 1.07995 * 119.86078 * 180.02562 * 19 17 16 41 41 H 1.09000 * 109.47089 * 240.00279 * 21 20 19 42 42 H 0.96707 * 114.00255 * 299.99896 * 22 21 20 43 43 H 1.48498 * 109.99990 * 180.02562 * 23 21 20 44 44 H 1.48505 * 109.99693 * 301.31744 * 23 21 20 45 45 H 1.07999 * 120.06363 * 180.25461 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2750 -0.0006 6 6 4.1076 2.7157 -0.0011 7 6 5.1678 2.2290 0.9911 8 6 4.1918 1.1209 1.3971 9 6 5.5107 3.2274 2.1087 10 6 6.9371 3.7078 1.7149 11 6 7.5420 2.4169 1.1071 12 7 6.4230 1.7712 0.3932 13 6 6.5375 0.9076 -0.6352 14 8 5.5481 0.3634 -1.0850 15 6 7.8667 0.6220 -1.2161 16 6 9.0138 0.7323 -0.4292 17 6 10.2520 0.4636 -0.9779 18 35 11.8081 0.6129 0.0860 19 6 10.3563 0.0852 -2.3053 20 6 9.2223 -0.0269 -3.0901 21 6 9.3453 -0.4389 -4.5344 22 8 8.6112 -1.6459 -4.7495 23 14 11.1395 -0.7218 -4.9488 24 6 7.9789 0.2331 -2.5522 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 0.5138 -0.8899 27 1 -0.3633 -1.0277 0.0005 28 1 4.0230 0.6373 -0.7574 29 1 3.4146 3.4432 0.4215 30 1 4.5183 3.0295 -0.9607 31 1 4.6697 0.1546 1.5580 32 1 3.5222 1.4042 2.2093 33 1 4.8091 4.0616 2.1101 34 1 5.5214 2.7319 3.0795 35 1 7.4999 4.0271 2.5921 36 1 6.8899 4.5040 0.9720 37 1 7.9149 1.7646 1.8968 38 1 8.3434 2.6648 0.4111 39 1 8.9332 1.0271 0.6067 40 1 11.3269 -0.1244 -2.7300 41 1 8.9445 0.3488 -5.1724 42 1 8.9142 -2.3915 -4.2133 43 1 11.2744 -1.1282 -6.3707 44 1 11.9199 0.5167 -4.6987 45 1 7.0943 0.1413 -3.1650 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15736542_12335870.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:33:34 Heat of formation + Delta-G solvation = -48.694805 kcal Electronic energy + Delta-G solvation = -31547.581047 eV Core-core repulsion = 27159.642383 eV Total energy + Delta-G solvation = -4387.938664 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.061 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -42.79026 -41.47883 -40.67257 -38.99332 -37.85989 -37.63800 -36.72891 -33.62125 -33.53697 -32.21435 -30.47288 -29.82449 -28.30542 -27.06991 -26.96206 -26.10496 -24.92303 -23.38271 -22.70281 -21.93406 -21.46596 -19.47956 -19.02473 -18.51077 -18.13124 -17.61467 -17.47295 -17.45254 -17.16983 -16.96029 -16.33570 -16.22026 -15.96829 -15.53339 -15.24509 -15.00642 -14.92579 -14.64052 -14.49057 -14.23200 -14.17664 -14.06270 -13.71718 -13.52800 -13.25526 -13.22731 -13.07442 -12.90091 -12.71010 -12.26708 -12.08982 -11.99440 -11.95641 -11.92062 -11.89512 -11.72010 -11.46028 -11.36711 -11.20695 -10.64653 -10.57465 -10.17378 -9.96445 -9.80762 -5.04987 -0.48513 -0.15711 0.44562 1.05789 1.20707 1.41038 1.57712 1.63474 1.75584 1.93462 2.36114 3.01762 3.26432 3.28288 3.37962 3.48280 3.54809 3.55965 3.67818 3.76386 3.88123 3.91834 3.97488 4.09216 4.14861 4.21225 4.22389 4.26412 4.29132 4.37875 4.47841 4.51450 4.56315 4.61221 4.66663 4.70670 4.78153 4.84871 4.88286 4.94764 4.97738 5.05899 5.09853 5.21046 5.26945 5.31154 5.33947 5.43809 6.24887 6.63982 6.70971 7.02597 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.367 6.367 3 C 0.468 3.532 4 O -0.543 6.543 5 C -0.155 4.155 6 C -0.117 4.117 7 C 0.148 3.852 8 C -0.112 4.112 9 C -0.113 4.113 10 C -0.127 4.127 11 C 0.079 3.921 12 N -0.588 5.588 13 C 0.575 3.425 14 O -0.546 6.546 15 C -0.129 4.129 16 C -0.059 4.059 17 C -0.098 4.098 18 Br -0.027 7.027 19 C -0.063 4.063 20 C -0.115 4.115 21 C -0.074 4.074 22 O -0.553 6.553 23 Si 0.769 3.231 24 C -0.029 4.029 25 H 0.064 0.936 26 H 0.058 0.942 27 H 0.128 0.872 28 H 0.178 0.822 29 H 0.102 0.898 30 H 0.065 0.935 31 H 0.080 0.920 32 H 0.103 0.897 33 H 0.092 0.908 34 H 0.099 0.901 35 H 0.113 0.887 36 H 0.076 0.924 37 H 0.101 0.899 38 H 0.095 0.905 39 H 0.170 0.830 40 H 0.156 0.844 41 H 0.114 0.886 42 H 0.397 0.603 43 H -0.295 1.295 44 H -0.275 1.275 45 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.668 -0.224 5.266 8.500 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.283 6.283 3 C 0.313 3.687 4 O -0.434 6.434 5 C -0.172 4.172 6 C -0.156 4.156 7 C 0.062 3.938 8 C -0.150 4.150 9 C -0.151 4.151 10 C -0.165 4.165 11 C -0.042 4.042 12 N -0.318 5.318 13 C 0.367 3.633 14 O -0.428 6.428 15 C -0.133 4.133 16 C -0.079 4.079 17 C -0.177 4.177 18 Br 0.059 6.941 19 C -0.082 4.082 20 C -0.117 4.117 21 C -0.183 4.183 22 O -0.361 6.361 23 Si 0.674 3.326 24 C -0.049 4.049 25 H 0.082 0.918 26 H 0.077 0.923 27 H 0.146 0.854 28 H 0.193 0.807 29 H 0.120 0.880 30 H 0.084 0.916 31 H 0.099 0.901 32 H 0.122 0.878 33 H 0.110 0.890 34 H 0.118 0.882 35 H 0.131 0.869 36 H 0.095 0.905 37 H 0.119 0.881 38 H 0.113 0.887 39 H 0.187 0.813 40 H 0.173 0.827 41 H 0.131 0.869 42 H 0.247 0.753 43 H -0.222 1.222 44 H -0.201 1.201 45 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 6.888 0.397 4.491 8.232 hybrid contribution -1.639 0.382 -0.692 1.819 sum 5.250 0.779 3.799 6.527 Atomic orbital electron populations 1.23524 0.75238 1.05556 1.02397 1.86550 1.24719 1.33469 1.83546 1.24409 0.92862 0.80842 0.70557 1.90608 1.68069 1.37287 1.47400 1.24149 0.85392 1.02783 1.04887 1.23211 0.97311 0.94768 1.00262 1.21463 0.83716 0.94805 0.93822 1.23097 0.97446 1.00119 0.94354 1.22612 0.98191 0.97577 0.96715 1.22920 0.95259 0.95897 1.02433 1.23161 0.89151 0.95075 0.96789 1.48123 1.08380 1.43376 1.31922 1.18151 0.88436 0.78173 0.78590 1.90235 1.37763 1.52018 1.62750 1.19712 0.92286 1.06026 0.95299 1.21987 0.89368 0.94928 1.01628 1.21747 0.93185 1.07427 0.95358 1.96861 1.32354 1.97115 1.67786 1.21381 0.99157 0.95638 0.92043 1.20315 0.92489 1.01664 0.97193 1.25227 1.10349 0.89728 0.93037 1.86510 1.61360 1.20232 1.67993 0.93828 0.72935 0.84925 0.80936 1.21189 0.98141 0.92075 0.93474 0.91764 0.92327 0.85364 0.80690 0.87987 0.91581 0.90112 0.87838 0.88956 0.88250 0.86879 0.90497 0.88130 0.88734 0.81317 0.82728 0.86907 0.75300 1.22242 1.20112 0.85087 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.10 10.56 113.37 1.20 1.30 16 2 O -0.37 -3.70 10.57 -51.47 -0.54 -4.24 16 3 C 0.47 5.39 7.48 71.24 0.53 5.92 16 4 O -0.54 -8.61 15.64 22.00 0.34 -8.26 16 5 C -0.15 -1.16 3.61 -10.94 -0.04 -1.20 16 6 C -0.12 -0.51 6.51 30.95 0.20 -0.31 16 7 C 0.15 -0.13 1.44 3.97 0.01 -0.13 16 8 C -0.11 -0.21 6.72 30.94 0.21 0.00 16 9 C -0.11 0.78 6.31 31.73 0.20 0.98 16 10 C -0.13 1.23 7.11 32.16 0.23 1.46 16 11 C 0.08 -0.65 5.05 86.84 0.44 -0.21 16 12 N -0.59 0.85 3.17 -769.97 -2.44 -1.58 16 13 C 0.57 1.90 7.36 86.79 0.64 2.54 16 14 O -0.55 -5.20 12.23 -3.87 -0.05 -5.25 16 15 C -0.13 -0.04 5.71 -20.09 -0.11 -0.15 16 16 C -0.06 0.23 7.67 22.55 0.17 0.40 16 17 C -0.10 0.36 6.22 22.27 0.14 0.49 16 18 Br -0.03 0.11 33.69 -20.37 -0.69 -0.58 16 19 C -0.06 0.24 8.41 22.34 0.19 0.43 16 20 C -0.12 0.23 5.39 -19.90 -0.11 0.12 16 21 C -0.07 0.16 2.82 71.24 0.20 0.36 16 22 O -0.55 0.32 12.76 -148.98 -1.90 -1.58 16 23 Si 0.77 -3.16 29.78 68.60 2.04 -1.11 16 24 C -0.03 -0.04 9.15 22.53 0.21 0.17 16 25 H 0.06 0.22 8.13 -2.38 -0.02 0.20 16 26 H 0.06 0.27 8.13 -2.39 -0.02 0.26 16 27 H 0.13 -0.26 8.14 -2.39 -0.02 -0.28 16 28 H 0.18 1.96 4.07 -81.40 -0.33 1.63 16 29 H 0.10 0.50 7.21 -2.39 -0.02 0.48 16 30 H 0.07 0.42 8.14 -2.39 -0.02 0.40 16 31 H 0.08 0.21 8.14 -2.39 -0.02 0.19 16 32 H 0.10 0.00 8.08 -2.38 -0.02 -0.02 16 33 H 0.09 -0.63 7.79 -2.39 -0.02 -0.65 16 34 H 0.10 -0.91 8.11 -2.39 -0.02 -0.93 16 35 H 0.11 -1.52 8.14 -2.39 -0.02 -1.54 16 36 H 0.08 -0.63 8.14 -2.39 -0.02 -0.65 16 37 H 0.10 -1.18 7.37 -2.39 -0.02 -1.20 16 38 H 0.09 -0.87 6.07 -2.39 -0.01 -0.88 16 39 H 0.17 -1.34 4.59 -2.91 -0.01 -1.35 16 40 H 0.16 -1.09 4.86 -2.91 -0.01 -1.11 16 41 H 0.11 -0.13 7.96 -2.39 -0.02 -0.15 16 42 H 0.40 -3.44 8.70 -74.05 -0.64 -4.08 16 43 H -0.29 -1.10 7.11 99.48 0.71 -0.39 16 44 H -0.27 0.13 7.11 99.48 0.71 0.83 16 45 H 0.13 0.53 7.89 -2.91 -0.02 0.50 16 Total: 0.00 -20.35 379.23 1.19 -19.16 By element: Atomic # 1 Polarization: -8.86 SS G_CDS: 0.13 Total: -8.73 kcal Atomic # 6 Polarization: 7.88 SS G_CDS: 4.30 Total: 12.18 kcal Atomic # 7 Polarization: 0.85 SS G_CDS: -2.44 Total: -1.58 kcal Atomic # 8 Polarization: -17.18 SS G_CDS: -2.15 Total: -19.33 kcal Atomic # 14 Polarization: -3.16 SS G_CDS: 2.04 Total: -1.11 kcal Atomic # 35 Polarization: 0.11 SS G_CDS: -0.69 Total: -0.58 kcal Total: -20.35 1.19 -19.16 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_12335870.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.539 kcal (2) G-P(sol) polarization free energy of solvation -20.348 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.887 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.192 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.156 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.695 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds