Wall clock time and date at job start Sun Mar 7 2021 03:33:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34223 * 117.00203 * 2 1 4 4 O 1.20820 * 120.00211 * 0.02562 * 3 2 1 5 5 C 1.50706 * 119.99742 * 180.02562 * 3 2 1 6 6 C 1.53900 * 113.59189 * 180.02562 * 5 3 2 7 7 C 1.53147 * 86.89075 * 139.53148 * 6 5 3 8 8 C 1.53133 * 87.73638 * 334.92244 * 7 6 5 9 9 C 1.53741 * 114.76555 * 218.56446 * 7 6 5 10 10 C 1.55311 * 102.73587 * 251.58484 * 9 7 6 11 11 C 1.55223 * 101.55360 * 324.82347 * 10 9 7 12 12 N 1.46381 * 115.35661 * 92.05148 * 7 6 5 13 13 C 1.34781 * 125.80205 * 311.10917 * 12 7 6 14 14 O 1.21581 * 119.99658 * 354.15209 * 13 12 7 15 15 C 1.47533 * 119.99959 * 174.42269 * 13 12 7 16 16 C 1.40137 * 120.19127 * 219.60253 * 15 13 12 17 17 O 1.35645 * 120.15214 * 0.03022 * 16 15 13 18 18 C 1.42892 * 117.00271 * 180.02562 * 17 16 15 19 19 C 1.38715 * 119.69356 * 179.77293 * 16 15 13 20 20 C 1.38054 * 120.08856 * 0.51064 * 19 16 15 21 21 C 1.38547 * 120.38906 * 359.74533 * 20 19 16 22 22 C 1.50699 * 119.84886 * 179.97438 * 21 20 19 23 23 O 1.42903 * 109.46697 * 245.01739 * 22 21 20 24 24 Si 1.86301 * 109.47171 * 5.01629 * 22 21 20 25 25 C 1.37792 * 120.30085 * 359.97438 * 21 20 19 26 26 H 1.09008 * 109.46687 * 299.99850 * 1 2 3 27 27 H 1.08996 * 109.47167 * 59.99095 * 1 2 3 28 28 H 1.08995 * 109.47429 * 180.02562 * 1 2 3 29 29 H 1.08990 * 112.83639 * 48.86485 * 5 3 2 30 30 H 1.09002 * 113.64771 * 25.02899 * 6 5 3 31 31 H 1.09000 * 113.72456 * 254.04480 * 6 5 3 32 32 H 1.08994 * 113.64604 * 139.57455 * 8 7 6 33 33 H 1.09005 * 113.64383 * 270.58032 * 8 7 6 34 34 H 1.08992 * 110.75968 * 9.89386 * 9 7 6 35 35 H 1.08997 * 110.75819 * 133.08828 * 9 7 6 36 36 H 1.08998 * 110.98805 * 83.10834 * 10 9 7 37 37 H 1.08994 * 110.98594 * 206.88804 * 10 9 7 38 38 H 1.09004 * 110.51165 * 278.16760 * 11 10 9 39 39 H 1.08990 * 110.33681 * 155.77193 * 11 10 9 40 40 H 1.08998 * 109.47373 * 180.02562 * 18 17 16 41 41 H 1.09001 * 109.46751 * 299.99503 * 18 17 16 42 42 H 1.08997 * 109.47411 * 59.99293 * 18 17 16 43 43 H 1.07998 * 119.95063 * 180.25422 * 19 16 15 44 44 H 1.08002 * 119.80327 * 179.71926 * 20 19 16 45 45 H 1.08995 * 109.47433 * 125.01953 * 22 21 20 46 46 H 0.96700 * 113.99785 * 60.00446 * 23 22 21 47 47 H 1.48498 * 109.99669 * 58.68494 * 24 22 21 48 48 H 1.48497 * 109.99760 * 180.02562 * 24 22 21 49 49 H 1.07997 * 120.04492 * 180.02562 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2092 0.0005 5 6 3.5664 1.2747 -0.0006 6 6 4.1078 2.7153 0.0001 7 6 5.1680 2.2276 0.9919 8 6 4.1919 1.1194 1.3970 9 6 5.5110 3.2252 2.1102 10 6 6.9348 3.7048 1.7165 11 6 7.5425 2.4108 1.1118 12 7 6.4232 1.7704 0.3933 13 6 6.5376 0.9069 -0.6352 14 8 5.5491 0.3549 -1.0783 15 6 7.8632 0.6271 -1.2194 16 6 8.0066 0.4865 -2.6063 17 8 6.9272 0.6077 -3.4187 18 6 7.1501 0.4513 -4.8215 19 6 9.2586 0.2282 -3.1449 20 6 10.3554 0.0999 -2.3164 21 6 10.2167 0.2329 -0.9444 22 6 11.4221 0.0900 -0.0513 23 8 11.2638 -1.0602 0.7819 24 14 12.9507 -0.1071 -1.0980 25 6 8.9816 0.4953 -0.3926 26 1 -0.3633 0.5139 0.8901 27 1 -0.3633 0.5139 -0.8899 28 1 -0.3634 -1.0276 0.0005 29 1 4.0230 0.6370 -0.7574 30 1 3.4149 3.4426 0.4233 31 1 4.5184 3.0299 -0.9593 32 1 4.6698 0.1530 1.5570 33 1 3.5224 1.4020 2.2094 34 1 4.8094 4.0593 2.1125 35 1 5.5220 2.7289 3.0806 36 1 6.8870 4.5019 0.9747 37 1 7.4958 4.0244 2.5946 38 1 7.9100 1.7560 1.9020 39 1 8.3463 2.6579 0.4184 40 1 6.2073 0.5724 -5.3549 41 1 7.8595 1.2052 -5.1628 42 1 7.5536 -0.5422 -5.0167 43 1 9.3746 0.1232 -4.2135 44 1 11.3272 -0.1057 -2.7404 45 1 11.5204 0.9790 0.5715 46 1 11.1705 -1.8897 0.2937 47 1 13.1090 1.0682 -1.9918 48 1 14.1463 -0.2496 -0.2290 49 1 8.8783 0.5986 0.6774 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15736542_12496546.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:33:52 Heat of formation + Delta-G solvation = -95.788579 kcal Electronic energy + Delta-G solvation = -34487.577660 eV Core-core repulsion = 29963.195049 eV Total energy + Delta-G solvation = -4524.382611 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.165 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.59183 -41.49719 -40.72748 -39.28251 -38.71499 -37.45575 -37.19251 -36.46111 -33.30182 -32.11730 -31.85486 -29.62473 -28.69284 -28.09942 -26.81807 -26.27195 -25.90974 -24.71144 -23.30115 -23.09234 -21.60570 -21.18169 -19.46307 -18.99922 -18.64191 -18.37418 -17.95901 -17.38182 -17.34802 -17.18642 -16.98890 -16.74390 -16.29885 -16.17084 -15.99657 -15.84628 -15.33802 -15.14663 -14.83366 -14.67237 -14.57314 -14.35659 -14.35419 -14.00296 -13.78125 -13.64341 -13.45905 -13.32612 -13.18435 -13.08535 -12.86026 -12.59290 -12.45348 -12.25578 -12.20157 -12.04624 -11.96206 -11.87179 -11.55160 -11.50338 -11.39716 -10.97669 -10.58945 -10.33765 -10.06985 -9.73156 -9.32672 -5.13249 -0.23899 0.14079 1.19368 1.49580 1.53236 1.64426 1.79234 1.89010 2.04947 2.12646 2.51564 3.14977 3.34556 3.36695 3.49391 3.52784 3.57422 3.66243 3.67867 3.78915 3.86408 3.93217 3.99313 4.09060 4.13695 4.15249 4.26682 4.32397 4.34254 4.39776 4.41523 4.43551 4.45388 4.51466 4.58436 4.65056 4.71392 4.76648 4.79687 4.85554 4.87084 4.89098 4.97847 4.99516 5.09786 5.12896 5.19108 5.44273 5.46635 5.55857 5.69995 6.19388 6.42903 6.48820 7.05553 7.33648 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.356 6.356 3 C 0.470 3.530 4 O -0.517 6.517 5 C -0.146 4.146 6 C -0.118 4.118 7 C 0.143 3.857 8 C -0.120 4.120 9 C -0.116 4.116 10 C -0.134 4.134 11 C 0.095 3.905 12 N -0.594 5.594 13 C 0.588 3.412 14 O -0.506 6.506 15 C -0.166 4.166 16 C 0.189 3.811 17 O -0.293 6.293 18 C 0.022 3.978 19 C -0.210 4.210 20 C -0.048 4.048 21 C -0.167 4.167 22 C -0.061 4.061 23 O -0.540 6.540 24 Si 0.683 3.317 25 C -0.024 4.024 26 H 0.061 0.939 27 H 0.061 0.939 28 H 0.100 0.900 29 H 0.192 0.808 30 H 0.103 0.897 31 H 0.077 0.923 32 H 0.083 0.917 33 H 0.093 0.907 34 H 0.088 0.912 35 H 0.084 0.916 36 H 0.080 0.920 37 H 0.088 0.912 38 H 0.077 0.923 39 H 0.083 0.917 40 H 0.105 0.895 41 H 0.058 0.942 42 H 0.061 0.939 43 H 0.141 0.859 44 H 0.134 0.866 45 H 0.114 0.886 46 H 0.380 0.620 47 H -0.257 1.257 48 H -0.253 1.253 49 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.399 -0.950 -1.347 5.645 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.273 6.273 3 C 0.314 3.686 4 O -0.405 6.405 5 C -0.163 4.163 6 C -0.156 4.156 7 C 0.058 3.942 8 C -0.158 4.158 9 C -0.154 4.154 10 C -0.172 4.172 11 C -0.028 4.028 12 N -0.327 5.327 13 C 0.379 3.621 14 O -0.384 6.384 15 C -0.170 4.170 16 C 0.141 3.859 17 O -0.204 6.204 18 C -0.073 4.073 19 C -0.229 4.229 20 C -0.066 4.066 21 C -0.167 4.167 22 C -0.172 4.172 23 O -0.346 6.346 24 Si 0.585 3.415 25 C -0.043 4.043 26 H 0.080 0.920 27 H 0.080 0.920 28 H 0.119 0.881 29 H 0.207 0.793 30 H 0.122 0.878 31 H 0.096 0.904 32 H 0.102 0.898 33 H 0.111 0.889 34 H 0.107 0.893 35 H 0.102 0.898 36 H 0.098 0.902 37 H 0.106 0.894 38 H 0.095 0.905 39 H 0.101 0.899 40 H 0.124 0.876 41 H 0.077 0.923 42 H 0.080 0.920 43 H 0.159 0.841 44 H 0.151 0.849 45 H 0.131 0.869 46 H 0.228 0.772 47 H -0.181 1.181 48 H -0.178 1.178 49 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 5.281 -0.191 -1.366 5.458 hybrid contribution -0.534 0.417 0.007 0.677 sum 4.747 0.226 -1.360 4.943 Atomic orbital electron populations 1.23265 0.76713 1.03677 1.02420 1.86554 1.23114 1.33730 1.83871 1.24030 0.92191 0.81046 0.71362 1.90629 1.67381 1.36530 1.45999 1.24077 0.86490 1.02017 1.03689 1.23236 0.96605 0.95597 1.00205 1.21417 0.84216 0.94843 0.93766 1.23110 0.97347 0.99851 0.95508 1.22522 0.97375 0.98178 0.97293 1.22881 0.96017 0.96648 1.01625 1.22706 0.89749 0.94188 0.96134 1.48042 1.07170 1.44760 1.32694 1.17698 0.88319 0.77987 0.78059 1.90224 1.36802 1.49852 1.61479 1.19078 0.94085 1.12774 0.91051 1.18966 0.86442 0.91280 0.89246 1.86225 1.30935 1.84857 1.18379 1.23217 1.04206 1.01494 0.78369 1.21205 0.91637 1.08896 1.01177 1.20967 0.98144 0.94954 0.92556 1.20142 0.95995 1.06538 0.94059 1.24957 1.02645 0.91534 0.98101 1.86509 1.96004 1.16600 1.35441 0.94796 0.76576 0.88795 0.81362 1.21152 0.90011 0.93252 0.99869 0.92036 0.91976 0.88114 0.79288 0.87848 0.90424 0.89832 0.88857 0.89336 0.89786 0.90178 0.89355 0.90522 0.89917 0.87647 0.92317 0.92031 0.84108 0.84880 0.86855 0.77243 1.18143 1.17786 0.84156 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.07 10.56 101.05 1.07 1.14 16 2 O -0.36 -1.79 10.56 -39.24 -0.41 -2.20 16 3 C 0.47 2.65 7.48 36.01 0.27 2.92 16 4 O -0.52 -3.97 15.64 -18.75 -0.29 -4.27 16 5 C -0.15 -0.58 3.61 -90.83 -0.33 -0.91 16 6 C -0.12 -0.31 6.52 -26.19 -0.17 -0.48 16 7 C 0.14 0.12 1.44 -131.36 -0.19 -0.07 16 8 C -0.12 -0.22 6.72 -26.19 -0.18 -0.40 16 9 C -0.12 0.18 6.30 -25.12 -0.16 0.03 16 10 C -0.13 0.35 7.10 -24.33 -0.17 0.18 16 11 C 0.09 -0.17 5.22 -2.25 -0.01 -0.18 16 12 N -0.59 -0.52 3.17 -157.29 -0.50 -1.02 16 13 C 0.59 1.78 7.03 -12.47 -0.09 1.69 16 14 O -0.51 -2.84 11.71 -10.56 -0.12 -2.97 16 15 C -0.17 -0.27 5.46 -104.84 -0.57 -0.84 16 16 C 0.19 0.27 6.67 -38.69 -0.26 0.01 16 17 O -0.29 -0.69 9.27 -34.49 -0.32 -1.01 16 18 C 0.02 -0.04 9.81 101.05 0.99 0.95 16 19 C -0.21 0.22 9.03 -39.47 -0.36 -0.14 16 20 C -0.05 0.09 8.65 -39.53 -0.34 -0.25 16 21 C -0.17 0.22 5.35 -104.67 -0.56 -0.34 16 22 C -0.06 0.11 2.79 36.01 0.10 0.22 16 23 O -0.54 0.62 12.83 -35.23 -0.45 0.17 16 24 Si 0.68 -1.63 29.79 -169.99 -5.06 -6.70 16 25 C -0.02 0.01 7.54 -39.19 -0.30 -0.29 16 26 H 0.06 0.11 8.13 -51.92 -0.42 -0.31 16 27 H 0.06 0.13 8.13 -51.93 -0.42 -0.29 16 28 H 0.10 -0.05 8.14 -51.93 -0.42 -0.47 16 29 H 0.19 1.08 4.08 -56.90 -0.23 0.85 16 30 H 0.10 0.28 7.21 -51.93 -0.37 -0.09 16 31 H 0.08 0.27 8.14 -51.93 -0.42 -0.15 16 32 H 0.08 0.19 8.14 -51.93 -0.42 -0.23 16 33 H 0.09 0.09 8.08 -51.93 -0.42 -0.33 16 34 H 0.09 -0.16 7.79 -51.93 -0.40 -0.57 16 35 H 0.08 -0.19 8.11 -51.93 -0.42 -0.61 16 36 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 37 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 38 H 0.08 -0.22 7.35 -51.93 -0.38 -0.60 16 39 H 0.08 -0.18 6.66 -51.93 -0.35 -0.53 16 40 H 0.11 -0.27 8.14 -51.93 -0.42 -0.69 16 41 H 0.06 -0.18 7.65 -51.93 -0.40 -0.58 16 42 H 0.06 -0.18 7.67 -51.93 -0.40 -0.58 16 43 H 0.14 -0.45 6.30 -52.49 -0.33 -0.78 16 44 H 0.13 -0.55 4.88 -52.49 -0.26 -0.81 16 45 H 0.11 -0.21 7.96 -51.93 -0.41 -0.63 16 46 H 0.38 -1.77 8.70 45.56 0.40 -1.38 16 47 H -0.26 0.04 7.11 56.52 0.40 0.44 16 48 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 49 H 0.14 -0.18 5.79 -52.49 -0.30 -0.49 16 LS Contribution 387.80 15.07 5.84 5.84 Total: 0.00 -9.55 387.80 -9.43 -18.98 By element: Atomic # 1 Polarization: -3.21 SS G_CDS: -6.86 Total: -10.07 kcal Atomic # 6 Polarization: 4.49 SS G_CDS: -1.25 Total: 3.24 kcal Atomic # 7 Polarization: -0.52 SS G_CDS: -0.50 Total: -1.02 kcal Atomic # 8 Polarization: -8.68 SS G_CDS: -1.60 Total: -10.28 kcal Atomic # 14 Polarization: -1.63 SS G_CDS: -5.06 Total: -6.70 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -9.55 -9.43 -18.98 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_12496546.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.808 kcal (2) G-P(sol) polarization free energy of solvation -9.550 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.358 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.431 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.981 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.789 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds