Wall clock time and date at job start Sun Mar 7 2021 03:33:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34223 * 117.00203 * 2 1 4 4 O 1.20820 * 120.00211 * 0.02562 * 3 2 1 5 5 C 1.50706 * 119.99742 * 180.02562 * 3 2 1 6 6 C 1.53900 * 113.59189 * 180.02562 * 5 3 2 7 7 C 1.53147 * 86.89075 * 139.53148 * 6 5 3 8 8 C 1.53133 * 87.73638 * 334.92244 * 7 6 5 9 9 C 1.53741 * 114.76555 * 218.56446 * 7 6 5 10 10 C 1.55311 * 102.73587 * 251.58484 * 9 7 6 11 11 C 1.55223 * 101.55360 * 324.82347 * 10 9 7 12 12 N 1.46381 * 115.35661 * 92.05148 * 7 6 5 13 13 C 1.34781 * 125.80205 * 311.10917 * 12 7 6 14 14 O 1.21581 * 119.99658 * 354.15209 * 13 12 7 15 15 C 1.47533 * 119.99959 * 174.42269 * 13 12 7 16 16 C 1.40137 * 120.19127 * 219.60253 * 15 13 12 17 17 O 1.35645 * 120.15214 * 0.03022 * 16 15 13 18 18 C 1.42892 * 117.00271 * 180.02562 * 17 16 15 19 19 C 1.38715 * 119.69356 * 179.77293 * 16 15 13 20 20 C 1.38054 * 120.08856 * 0.51064 * 19 16 15 21 21 C 1.38547 * 120.38906 * 359.74533 * 20 19 16 22 22 C 1.50699 * 119.84886 * 179.97438 * 21 20 19 23 23 O 1.42903 * 109.46697 * 245.01739 * 22 21 20 24 24 Si 1.86301 * 109.47171 * 5.01629 * 22 21 20 25 25 C 1.37792 * 120.30085 * 359.97438 * 21 20 19 26 26 H 1.09008 * 109.46687 * 299.99850 * 1 2 3 27 27 H 1.08996 * 109.47167 * 59.99095 * 1 2 3 28 28 H 1.08995 * 109.47429 * 180.02562 * 1 2 3 29 29 H 1.08990 * 112.83639 * 48.86485 * 5 3 2 30 30 H 1.09002 * 113.64771 * 25.02899 * 6 5 3 31 31 H 1.09000 * 113.72456 * 254.04480 * 6 5 3 32 32 H 1.08994 * 113.64604 * 139.57455 * 8 7 6 33 33 H 1.09005 * 113.64383 * 270.58032 * 8 7 6 34 34 H 1.08992 * 110.75968 * 9.89386 * 9 7 6 35 35 H 1.08997 * 110.75819 * 133.08828 * 9 7 6 36 36 H 1.08998 * 110.98805 * 83.10834 * 10 9 7 37 37 H 1.08994 * 110.98594 * 206.88804 * 10 9 7 38 38 H 1.09004 * 110.51165 * 278.16760 * 11 10 9 39 39 H 1.08990 * 110.33681 * 155.77193 * 11 10 9 40 40 H 1.08998 * 109.47373 * 180.02562 * 18 17 16 41 41 H 1.09001 * 109.46751 * 299.99503 * 18 17 16 42 42 H 1.08997 * 109.47411 * 59.99293 * 18 17 16 43 43 H 1.07998 * 119.95063 * 180.25422 * 19 16 15 44 44 H 1.08002 * 119.80327 * 179.71926 * 20 19 16 45 45 H 1.08995 * 109.47433 * 125.01953 * 22 21 20 46 46 H 0.96700 * 113.99785 * 60.00446 * 23 22 21 47 47 H 1.48498 * 109.99669 * 58.68494 * 24 22 21 48 48 H 1.48497 * 109.99760 * 180.02562 * 24 22 21 49 49 H 1.07997 * 120.04492 * 180.02562 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2092 0.0005 5 6 3.5664 1.2747 -0.0006 6 6 4.1078 2.7153 0.0001 7 6 5.1680 2.2276 0.9919 8 6 4.1919 1.1194 1.3970 9 6 5.5110 3.2252 2.1102 10 6 6.9348 3.7048 1.7165 11 6 7.5425 2.4108 1.1118 12 7 6.4232 1.7704 0.3933 13 6 6.5376 0.9069 -0.6352 14 8 5.5491 0.3549 -1.0783 15 6 7.8632 0.6271 -1.2194 16 6 8.0066 0.4865 -2.6063 17 8 6.9272 0.6077 -3.4187 18 6 7.1501 0.4513 -4.8215 19 6 9.2586 0.2282 -3.1449 20 6 10.3554 0.0999 -2.3164 21 6 10.2167 0.2329 -0.9444 22 6 11.4221 0.0900 -0.0513 23 8 11.2638 -1.0602 0.7819 24 14 12.9507 -0.1071 -1.0980 25 6 8.9816 0.4953 -0.3926 26 1 -0.3633 0.5139 0.8901 27 1 -0.3633 0.5139 -0.8899 28 1 -0.3634 -1.0276 0.0005 29 1 4.0230 0.6370 -0.7574 30 1 3.4149 3.4426 0.4233 31 1 4.5184 3.0299 -0.9593 32 1 4.6698 0.1530 1.5570 33 1 3.5224 1.4020 2.2094 34 1 4.8094 4.0593 2.1125 35 1 5.5220 2.7289 3.0806 36 1 6.8870 4.5019 0.9747 37 1 7.4958 4.0244 2.5946 38 1 7.9100 1.7560 1.9020 39 1 8.3463 2.6579 0.4184 40 1 6.2073 0.5724 -5.3549 41 1 7.8595 1.2052 -5.1628 42 1 7.5536 -0.5422 -5.0167 43 1 9.3746 0.1232 -4.2135 44 1 11.3272 -0.1057 -2.7404 45 1 11.5204 0.9790 0.5715 46 1 11.1705 -1.8897 0.2937 47 1 13.1090 1.0682 -1.9918 48 1 14.1463 -0.2496 -0.2290 49 1 8.8783 0.5986 0.6774 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15736542_12496546.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:33:50 Heat of formation + Delta-G solvation = -94.320527 kcal Electronic energy + Delta-G solvation = -34487.514001 eV Core-core repulsion = 29963.195049 eV Total energy + Delta-G solvation = -4524.318952 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.165 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -42.72743 -41.60547 -40.94737 -39.21750 -38.86606 -37.71585 -37.17330 -36.62360 -33.29032 -32.04868 -31.77729 -29.78858 -28.57792 -28.18335 -27.01800 -26.16376 -25.93443 -24.83714 -23.29498 -22.99579 -21.58432 -21.44461 -19.51539 -19.15715 -18.76580 -18.29565 -18.19395 -17.54726 -17.45685 -17.24549 -17.15983 -16.70390 -16.32381 -16.18710 -15.93613 -15.81712 -15.37344 -15.11370 -14.94204 -14.64346 -14.51960 -14.43485 -14.41850 -14.06055 -13.80922 -13.57459 -13.50969 -13.43779 -13.24601 -13.08965 -12.88482 -12.72588 -12.40871 -12.20312 -12.13564 -12.02036 -11.95661 -11.89722 -11.82419 -11.63727 -11.45338 -11.19731 -10.59645 -10.34454 -10.09649 -9.81232 -9.28279 -4.95422 -0.19264 0.21584 1.05786 1.35964 1.54320 1.67856 1.74129 1.78444 2.02117 2.22739 2.55982 3.12928 3.30540 3.41413 3.52066 3.56144 3.59647 3.67430 3.73914 3.79008 3.92870 3.95544 4.11887 4.14471 4.17801 4.21967 4.24148 4.30138 4.35575 4.36319 4.41831 4.53073 4.57245 4.59648 4.60827 4.66483 4.68169 4.71035 4.75136 4.87132 4.90310 4.96857 4.97434 5.06375 5.10022 5.22145 5.26016 5.28899 5.32811 5.46094 5.57374 6.25499 6.38483 6.64489 6.81616 7.17789 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.367 6.367 3 C 0.469 3.531 4 O -0.543 6.543 5 C -0.153 4.153 6 C -0.115 4.115 7 C 0.148 3.852 8 C -0.112 4.112 9 C -0.112 4.112 10 C -0.127 4.127 11 C 0.090 3.910 12 N -0.593 5.593 13 C 0.580 3.420 14 O -0.542 6.542 15 C -0.186 4.186 16 C 0.169 3.831 17 O -0.324 6.324 18 C 0.015 3.985 19 C -0.208 4.208 20 C -0.044 4.044 21 C -0.164 4.164 22 C -0.064 4.064 23 O -0.556 6.556 24 Si 0.767 3.233 25 C -0.023 4.023 26 H 0.063 0.937 27 H 0.058 0.942 28 H 0.129 0.871 29 H 0.176 0.824 30 H 0.102 0.898 31 H 0.062 0.938 32 H 0.077 0.923 33 H 0.103 0.897 34 H 0.092 0.908 35 H 0.097 0.903 36 H 0.075 0.925 37 H 0.110 0.890 38 H 0.092 0.908 39 H 0.087 0.913 40 H 0.107 0.893 41 H 0.073 0.927 42 H 0.074 0.926 43 H 0.163 0.837 44 H 0.159 0.841 45 H 0.115 0.885 46 H 0.395 0.605 47 H -0.281 1.281 48 H -0.303 1.303 49 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.973 -1.012 -0.837 7.096 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.283 6.283 3 C 0.315 3.685 4 O -0.434 6.434 5 C -0.171 4.171 6 C -0.154 4.154 7 C 0.062 3.938 8 C -0.151 4.151 9 C -0.150 4.150 10 C -0.165 4.165 11 C -0.032 4.032 12 N -0.325 5.325 13 C 0.372 3.628 14 O -0.423 6.423 15 C -0.190 4.190 16 C 0.121 3.879 17 O -0.237 6.237 18 C -0.079 4.079 19 C -0.227 4.227 20 C -0.062 4.062 21 C -0.165 4.165 22 C -0.174 4.174 23 O -0.364 6.364 24 Si 0.673 3.327 25 C -0.042 4.042 26 H 0.082 0.918 27 H 0.077 0.923 28 H 0.147 0.853 29 H 0.192 0.808 30 H 0.120 0.880 31 H 0.081 0.919 32 H 0.096 0.904 33 H 0.121 0.879 34 H 0.111 0.889 35 H 0.116 0.884 36 H 0.094 0.906 37 H 0.128 0.872 38 H 0.110 0.890 39 H 0.105 0.895 40 H 0.125 0.875 41 H 0.092 0.908 42 H 0.093 0.907 43 H 0.180 0.820 44 H 0.176 0.824 45 H 0.132 0.868 46 H 0.245 0.755 47 H -0.208 1.208 48 H -0.231 1.231 49 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 6.850 -0.264 -0.850 6.908 hybrid contribution -1.009 0.399 -0.173 1.099 sum 5.841 0.135 -1.023 5.932 Atomic orbital electron populations 1.23529 0.75202 1.05573 1.02417 1.86549 1.24763 1.33446 1.83543 1.24380 0.92780 0.80852 0.70518 1.90601 1.68042 1.37258 1.47457 1.24129 0.85426 1.02726 1.04782 1.23183 0.97315 0.94773 1.00106 1.21433 0.83925 0.94722 0.93759 1.23089 0.97521 1.00051 0.94404 1.22556 0.98143 0.97625 0.96708 1.22892 0.95364 0.95952 1.02273 1.22931 0.89093 0.94741 0.96397 1.48145 1.08014 1.44089 1.32204 1.18072 0.88601 0.77939 0.78227 1.90205 1.37982 1.51426 1.62666 1.19160 0.93887 1.14308 0.91653 1.19251 0.87170 0.92181 0.89299 1.86184 1.32176 1.85255 1.20051 1.23422 1.04926 1.02784 0.76808 1.21457 0.90761 1.08014 1.02451 1.21256 0.98948 0.93709 0.92256 1.20250 0.95726 1.06011 0.94502 1.25069 1.02594 0.91604 0.98132 1.86479 1.95982 1.17534 1.36367 0.93827 0.73327 0.86689 0.78851 1.21214 0.89824 0.93087 1.00033 0.91777 0.92271 0.85319 0.80818 0.88008 0.91944 0.90432 0.87862 0.88926 0.88412 0.90592 0.87159 0.89025 0.89452 0.87502 0.90796 0.90719 0.81969 0.82415 0.86774 0.75518 1.20790 1.23078 0.83471 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.13 10.56 113.37 1.20 1.33 16 2 O -0.37 -4.29 10.56 -51.35 -0.54 -4.83 16 3 C 0.47 6.31 7.48 71.24 0.53 6.85 16 4 O -0.54 -9.48 15.64 21.98 0.34 -9.14 16 5 C -0.15 -1.58 3.61 -10.93 -0.04 -1.62 16 6 C -0.12 -0.85 6.52 30.95 0.20 -0.65 16 7 C 0.15 0.37 1.44 3.97 0.01 0.37 16 8 C -0.11 -0.55 6.72 30.94 0.21 -0.35 16 9 C -0.11 0.43 6.30 31.64 0.20 0.63 16 10 C -0.13 0.81 7.10 32.15 0.23 1.03 16 11 C 0.09 -0.37 5.22 86.93 0.45 0.08 16 12 N -0.59 -1.58 3.17 -769.80 -2.44 -4.02 16 13 C 0.58 4.58 7.03 86.69 0.61 5.19 16 14 O -0.54 -7.69 11.71 11.19 0.13 -7.56 16 15 C -0.19 -0.80 5.46 -20.01 -0.11 -0.91 16 16 C 0.17 0.63 6.67 22.85 0.15 0.78 16 17 O -0.32 -2.08 9.27 -74.43 -0.69 -2.77 16 18 C 0.01 -0.04 9.81 113.37 1.11 1.07 16 19 C -0.21 0.57 9.03 22.34 0.20 0.77 16 20 C -0.04 0.23 8.65 22.30 0.19 0.42 16 21 C -0.16 0.60 5.35 -19.90 -0.11 0.49 16 22 C -0.06 0.31 2.79 71.24 0.20 0.51 16 23 O -0.56 1.89 12.83 -148.98 -1.91 -0.03 16 24 Si 0.77 -4.48 29.79 68.60 2.04 -2.43 16 25 C -0.02 0.02 7.54 22.52 0.17 0.19 16 26 H 0.06 0.29 8.13 -2.38 -0.02 0.27 16 27 H 0.06 0.33 8.13 -2.39 -0.02 0.31 16 28 H 0.13 -0.15 8.14 -2.39 -0.02 -0.17 16 29 H 0.18 2.58 4.08 -81.04 -0.33 2.25 16 30 H 0.10 0.75 7.21 -2.39 -0.02 0.73 16 31 H 0.06 0.62 8.14 -2.39 -0.02 0.60 16 32 H 0.08 0.47 8.14 -2.39 -0.02 0.45 16 33 H 0.10 0.27 8.08 -2.38 -0.02 0.25 16 34 H 0.09 -0.39 7.79 -2.39 -0.02 -0.41 16 35 H 0.10 -0.60 8.11 -2.39 -0.02 -0.62 16 36 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 37 H 0.11 -1.13 8.14 -2.39 -0.02 -1.15 16 38 H 0.09 -0.63 7.35 -2.38 -0.02 -0.65 16 39 H 0.09 -0.42 6.66 -2.39 -0.02 -0.44 16 40 H 0.11 -0.40 8.14 -2.39 -0.02 -0.42 16 41 H 0.07 -0.47 7.65 -2.39 -0.02 -0.48 16 42 H 0.07 -0.44 7.67 -2.39 -0.02 -0.46 16 43 H 0.16 -1.27 6.30 -2.91 -0.02 -1.29 16 44 H 0.16 -1.68 4.88 -2.91 -0.01 -1.70 16 45 H 0.11 -0.57 7.96 -2.39 -0.02 -0.59 16 46 H 0.39 -4.19 8.70 -74.06 -0.64 -4.84 16 47 H -0.28 0.44 7.11 99.48 0.71 1.15 16 48 H -0.30 -0.79 7.11 99.48 0.71 -0.08 16 49 H 0.15 -0.44 5.79 -2.91 -0.02 -0.45 16 Total: 0.00 -25.14 387.80 2.42 -22.72 By element: Atomic # 1 Polarization: -8.22 SS G_CDS: 0.07 Total: -8.15 kcal Atomic # 6 Polarization: 10.80 SS G_CDS: 5.41 Total: 16.20 kcal Atomic # 7 Polarization: -1.58 SS G_CDS: -2.44 Total: -4.02 kcal Atomic # 8 Polarization: -21.65 SS G_CDS: -2.67 Total: -24.32 kcal Atomic # 14 Polarization: -4.48 SS G_CDS: 2.04 Total: -2.43 kcal Total: -25.14 2.42 -22.72 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_12496546.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.601 kcal (2) G-P(sol) polarization free energy of solvation -25.137 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.738 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.418 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.719 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.321 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds