Wall clock time and date at job start Sun Mar 7 2021 03:34:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34234 * 116.99817 * 2 1 4 4 O 1.20823 * 120.00383 * 359.97438 * 3 2 1 5 5 C 1.50701 * 119.99737 * 179.97438 * 3 2 1 6 6 C 1.53896 * 113.59459 * 179.97438 * 5 3 2 7 7 C 1.53151 * 86.88986 * 139.53697 * 6 5 3 8 8 C 1.53143 * 87.73256 * 334.92418 * 7 6 5 9 9 C 1.53745 * 114.76859 * 218.57145 * 7 6 5 10 10 C 1.55584 * 102.76386 * 251.56595 * 9 7 6 11 11 C 1.54966 * 101.53952 * 325.04588 * 10 9 7 12 12 N 1.46379 * 115.36380 * 92.05302 * 7 6 5 13 13 C 1.34773 * 125.79639 * 311.15847 * 12 7 6 14 14 O 1.21630 * 120.00324 * 358.23416 * 13 12 7 15 15 C 1.47263 * 119.99960 * 178.23063 * 13 12 7 16 16 C 1.36766 * 126.94208 * 8.61901 * 15 13 12 17 17 N 1.34656 * 108.39858 * 179.97438 * 16 15 13 18 18 C 1.46503 * 124.85307 * 180.02562 * 17 16 15 19 19 C 1.36448 * 110.29799 * 0.02562 * 17 16 15 20 20 C 1.50703 * 125.57092 * 179.97438 * 19 17 16 21 21 O 1.42896 * 109.47451 * 29.99178 * 20 19 17 22 22 Si 1.86300 * 109.47007 * 149.99683 * 20 19 17 23 23 C 1.34486 * 108.85714 * 359.74400 * 19 17 16 24 24 H 1.08993 * 109.47163 * 60.00291 * 1 2 3 25 25 H 1.09002 * 109.47049 * 180.02562 * 1 2 3 26 26 H 1.09000 * 109.47272 * 300.00635 * 1 2 3 27 27 H 1.09005 * 112.83705 * 48.85811 * 5 3 2 28 28 H 1.09000 * 113.64369 * 25.03820 * 6 5 3 29 29 H 1.08997 * 113.72515 * 254.04333 * 6 5 3 30 30 H 1.08997 * 113.63990 * 139.57877 * 8 7 6 31 31 H 1.09004 * 113.64038 * 270.57763 * 8 7 6 32 32 H 1.09005 * 110.75346 * 9.87929 * 9 7 6 33 33 H 1.08996 * 110.76004 * 133.06731 * 9 7 6 34 34 H 1.08997 * 111.09754 * 206.96948 * 10 9 7 35 35 H 1.09005 * 110.99900 * 83.06880 * 10 9 7 36 36 H 1.09003 * 110.35563 * 277.76899 * 11 10 9 37 37 H 1.08999 * 110.36351 * 155.57242 * 11 10 9 38 38 H 1.08000 * 125.80222 * 359.94386 * 16 15 13 39 39 H 1.09005 * 109.46916 * 89.98017 * 18 17 16 40 40 H 1.08995 * 109.47519 * 209.97625 * 18 17 16 41 41 H 1.08994 * 109.47040 * 329.98430 * 18 17 16 42 42 H 1.09009 * 109.46840 * 269.99350 * 20 19 17 43 43 H 0.96698 * 113.99945 * 60.00448 * 21 20 19 44 44 H 1.48501 * 109.99917 * 179.97438 * 22 20 19 45 45 H 1.48494 * 110.00086 * 301.31274 * 22 20 19 46 46 H 1.08001 * 126.83565 * 180.25627 * 23 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.1076 2.7155 -0.0001 7 6 5.1671 2.2291 0.9931 8 6 4.1907 1.1213 1.3987 9 6 5.5092 3.2280 2.1106 10 6 6.9360 3.7081 1.7176 11 6 7.5413 2.4170 1.1108 12 7 6.4228 1.7711 0.3962 13 6 6.5380 0.9071 -0.6317 14 8 5.5424 0.4117 -1.1243 15 6 7.8694 0.5628 -1.1584 16 6 9.0797 0.9001 -0.6179 17 7 10.0509 0.3937 -1.4012 18 6 11.4875 0.5412 -1.1546 19 6 9.5059 -0.2767 -2.4573 20 6 10.2796 -0.9757 -3.5455 21 8 11.5218 -1.4467 -3.0194 22 14 9.2883 -2.4183 -4.1835 23 6 8.1656 -0.2159 -2.3658 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3634 0.5139 0.8899 27 1 4.0237 0.6368 -0.7557 28 1 3.4144 3.4432 0.4217 29 1 4.5191 3.0289 -0.9596 30 1 4.6685 0.1551 1.5604 31 1 3.5205 1.4049 2.2103 32 1 4.8076 4.0622 2.1111 33 1 5.5192 2.7329 3.0816 34 1 7.4980 4.0278 2.5951 35 1 6.8894 4.5041 0.9743 36 1 7.9135 1.7650 1.9011 37 1 8.3432 2.6647 0.4153 38 1 9.2307 1.4754 0.2835 39 1 11.8377 -0.2883 -0.5403 40 1 12.0213 0.5402 -2.1049 41 1 11.6722 1.4814 -0.6350 42 1 10.4714 -0.2778 -4.3606 43 1 11.4273 -2.0733 -2.2890 44 1 10.0401 -3.1157 -5.2576 45 1 8.9929 -3.3614 -3.0752 46 1 7.4496 -0.6520 -3.0468 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15736542_13287730.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:34:46 Heat of formation + Delta-G solvation = -31.649852 kcal Electronic energy + Delta-G solvation = -30235.484689 eV Core-core repulsion = 26095.365764 eV Total energy + Delta-G solvation = -4140.118926 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.161 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.75740 -42.11621 -40.77175 -38.65617 -37.96685 -37.39174 -36.49660 -33.85695 -32.87274 -31.29894 -29.61940 -28.16352 -27.79109 -26.77687 -26.37451 -25.40456 -24.05971 -22.85322 -21.60883 -21.03876 -20.73844 -19.22693 -18.65917 -18.42781 -17.64962 -17.58360 -17.10238 -16.98089 -16.85726 -16.53167 -16.27989 -15.71632 -15.51018 -15.41971 -15.19973 -14.87285 -14.65741 -14.38726 -14.30573 -14.02712 -13.95854 -13.57317 -13.49738 -13.39869 -13.30324 -13.20657 -13.09855 -12.84072 -12.52205 -12.41093 -12.04103 -11.95782 -11.94245 -11.53988 -11.49377 -11.37052 -11.00157 -10.94222 -10.12568 -9.78542 -9.54202 -9.26607 -4.94536 0.68817 1.00114 1.40519 1.52705 1.62921 1.72623 1.90280 2.04864 2.08030 2.53015 3.06283 3.28623 3.36532 3.49118 3.56375 3.63134 3.67423 3.75750 3.82462 3.93366 4.04541 4.09548 4.11477 4.26577 4.34260 4.36551 4.38846 4.39567 4.43665 4.46513 4.47836 4.61110 4.73162 4.78207 4.79136 4.80282 4.86230 4.91546 4.94260 5.00225 5.13906 5.14732 5.49702 5.58290 5.67758 5.74001 5.93022 6.08792 6.18340 6.53635 7.09096 7.50188 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.357 6.357 3 C 0.469 3.531 4 O -0.517 6.517 5 C -0.147 4.147 6 C -0.118 4.118 7 C 0.144 3.856 8 C -0.120 4.120 9 C -0.116 4.116 10 C -0.134 4.134 11 C 0.088 3.912 12 N -0.596 5.596 13 C 0.612 3.388 14 O -0.528 6.528 15 C -0.223 4.223 16 C 0.038 3.962 17 N -0.427 5.427 18 C 0.066 3.934 19 C -0.021 4.021 20 C -0.049 4.049 21 O -0.534 6.534 22 Si 0.710 3.290 23 C -0.128 4.128 24 H 0.062 0.938 25 H 0.100 0.900 26 H 0.060 0.940 27 H 0.195 0.805 28 H 0.102 0.898 29 H 0.078 0.922 30 H 0.082 0.918 31 H 0.092 0.908 32 H 0.088 0.912 33 H 0.082 0.918 34 H 0.087 0.913 35 H 0.080 0.920 36 H 0.074 0.926 37 H 0.087 0.913 38 H 0.183 0.817 39 H 0.075 0.925 40 H 0.100 0.900 41 H 0.082 0.918 42 H 0.122 0.878 43 H 0.377 0.623 44 H -0.254 1.254 45 H -0.257 1.257 46 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.670 1.246 2.697 6.401 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.273 6.273 3 C 0.313 3.687 4 O -0.406 6.406 5 C -0.164 4.164 6 C -0.156 4.156 7 C 0.058 3.942 8 C -0.159 4.159 9 C -0.154 4.154 10 C -0.172 4.172 11 C -0.034 4.034 12 N -0.328 5.328 13 C 0.405 3.595 14 O -0.407 6.407 15 C -0.233 4.233 16 C -0.098 4.098 17 N -0.102 5.102 18 C -0.076 4.076 19 C -0.129 4.129 20 C -0.159 4.159 21 O -0.341 6.341 22 Si 0.609 3.391 23 C -0.152 4.152 24 H 0.080 0.920 25 H 0.119 0.881 26 H 0.079 0.921 27 H 0.210 0.790 28 H 0.120 0.880 29 H 0.097 0.903 30 H 0.101 0.899 31 H 0.110 0.890 32 H 0.106 0.894 33 H 0.101 0.899 34 H 0.106 0.894 35 H 0.099 0.901 36 H 0.092 0.908 37 H 0.105 0.895 38 H 0.200 0.800 39 H 0.094 0.906 40 H 0.118 0.882 41 H 0.101 0.899 42 H 0.140 0.860 43 H 0.225 0.775 44 H -0.178 1.178 45 H -0.181 1.181 46 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 5.531 0.748 1.828 5.873 hybrid contribution 0.484 0.015 1.116 1.216 sum 6.015 0.763 2.944 6.740 Atomic orbital electron populations 1.23259 0.76759 1.03649 1.02410 1.86556 1.23081 1.33769 1.83894 1.24073 0.92245 0.81022 0.71339 1.90629 1.67409 1.36537 1.46010 1.24133 0.86382 1.02225 1.03642 1.23213 0.96593 0.95545 1.00262 1.21391 0.84357 0.94724 0.93716 1.23118 0.97399 0.99821 0.95568 1.22563 0.97299 0.98205 0.97330 1.22888 0.96091 0.96667 1.01546 1.22801 0.90150 0.94285 0.96209 1.47955 1.06743 1.44874 1.33229 1.17109 0.87964 0.76895 0.77485 1.90155 1.36866 1.53941 1.59778 1.20129 0.91024 1.11087 1.01102 1.22742 0.87161 1.01594 0.98311 1.43566 1.06957 1.40069 1.19595 1.22258 0.77655 1.03050 1.04601 1.20834 0.93292 1.04736 0.94086 1.24766 0.89522 1.05667 0.95904 1.86574 1.28378 1.64392 1.54715 0.94245 0.85915 0.76695 0.82271 1.21617 0.92924 1.02722 0.97979 0.91955 0.88146 0.92083 0.78993 0.87992 0.90320 0.89930 0.88985 0.89376 0.89910 0.89436 0.90133 0.90757 0.89480 0.80044 0.90639 0.88182 0.89942 0.86024 0.77545 1.17817 1.18055 0.82364 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.06 10.56 101.05 1.07 1.13 16 2 O -0.36 -1.72 10.57 -39.27 -0.41 -2.13 16 3 C 0.47 2.55 7.48 36.01 0.27 2.82 16 4 O -0.52 -3.89 15.64 -18.75 -0.29 -4.19 16 5 C -0.15 -0.54 3.61 -90.84 -0.33 -0.86 16 6 C -0.12 -0.27 6.48 -26.19 -0.17 -0.44 16 7 C 0.14 0.05 1.44 -131.35 -0.19 -0.13 16 8 C -0.12 -0.19 6.76 -26.19 -0.18 -0.36 16 9 C -0.12 0.24 6.31 -24.97 -0.16 0.09 16 10 C -0.13 0.47 7.11 -24.32 -0.17 0.30 16 11 C 0.09 -0.26 5.31 -2.39 -0.01 -0.28 16 12 N -0.60 -0.15 3.17 -157.54 -0.50 -0.65 16 13 C 0.61 1.56 7.57 -12.59 -0.10 1.47 16 14 O -0.53 -2.68 12.53 5.25 0.07 -2.62 16 15 C -0.22 -0.30 6.23 -103.35 -0.64 -0.94 16 16 C 0.04 -0.04 9.69 -16.85 -0.16 -0.20 16 17 N -0.43 0.50 3.09 -119.90 -0.37 0.13 16 18 C 0.07 -0.24 9.81 59.85 0.59 0.35 16 19 C -0.02 0.01 6.14 -81.86 -0.50 -0.50 16 20 C -0.05 0.07 2.87 36.01 0.10 0.17 16 21 O -0.53 0.59 10.31 -35.23 -0.36 0.23 16 22 Si 0.71 -0.87 31.11 -169.99 -5.29 -6.16 16 23 C -0.13 -0.13 9.50 -37.50 -0.36 -0.48 16 24 H 0.06 0.13 8.13 -51.93 -0.42 -0.30 16 25 H 0.10 -0.06 8.14 -51.93 -0.42 -0.48 16 26 H 0.06 0.10 8.13 -51.93 -0.42 -0.32 16 27 H 0.19 1.01 4.06 -57.01 -0.23 0.78 16 28 H 0.10 0.25 7.21 -51.93 -0.37 -0.12 16 29 H 0.08 0.24 8.14 -51.93 -0.42 -0.18 16 30 H 0.08 0.17 8.14 -51.93 -0.42 -0.26 16 31 H 0.09 0.07 8.08 -51.93 -0.42 -0.35 16 32 H 0.09 -0.20 7.79 -51.93 -0.40 -0.60 16 33 H 0.08 -0.23 8.11 -51.93 -0.42 -0.65 16 34 H 0.09 -0.43 8.14 -51.93 -0.42 -0.85 16 35 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 36 H 0.07 -0.30 8.05 -51.93 -0.42 -0.72 16 37 H 0.09 -0.35 5.31 -51.93 -0.28 -0.63 16 38 H 0.18 -0.73 4.75 -52.49 -0.25 -0.98 16 39 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 40 H 0.10 -0.29 6.73 -51.93 -0.35 -0.64 16 41 H 0.08 -0.43 8.13 -51.93 -0.42 -0.86 16 42 H 0.12 -0.25 7.96 -51.92 -0.41 -0.66 16 43 H 0.38 -1.24 8.70 45.56 0.40 -0.85 16 44 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 45 H -0.26 -0.40 7.11 56.52 0.40 0.00 16 46 H 0.16 -0.01 6.88 -52.49 -0.36 -0.37 16 LS Contribution 364.36 15.07 5.49 5.49 Total: 0.00 -9.10 364.36 -9.14 -18.24 By element: Atomic # 1 Polarization: -3.94 SS G_CDS: -6.52 Total: -10.46 kcal Atomic # 6 Polarization: 3.05 SS G_CDS: -0.94 Total: 2.11 kcal Atomic # 7 Polarization: 0.35 SS G_CDS: -0.87 Total: -0.51 kcal Atomic # 8 Polarization: -7.70 SS G_CDS: -1.01 Total: -8.71 kcal Atomic # 14 Polarization: -0.87 SS G_CDS: -5.29 Total: -6.16 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -9.10 -9.14 -18.24 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_13287730.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.411 kcal (2) G-P(sol) polarization free energy of solvation -9.103 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.514 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.136 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.239 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.650 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds