Wall clock time and date at job start Sun Mar 7 2021 03:35:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45194 * 1 3 3 C 1.34230 * 117.00521 * 2 1 4 4 O 1.20824 * 119.99474 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00093 * 180.02562 * 3 2 1 6 6 C 1.53898 * 113.59076 * 179.97438 * 5 3 2 7 7 C 1.53157 * 86.89053 * 139.53509 * 6 5 3 8 8 C 1.53141 * 87.72993 * 334.92371 * 7 6 5 9 9 C 1.53737 * 114.76426 * 218.56834 * 7 6 5 10 10 C 1.55308 * 102.73314 * 251.57964 * 9 7 6 11 11 C 1.55218 * 101.55520 * 324.82482 * 10 9 7 12 12 N 1.46378 * 115.35899 * 92.04815 * 7 6 5 13 13 C 1.34778 * 125.80501 * 311.11903 * 12 7 6 14 14 O 1.21598 * 119.99815 * 7.76064 * 13 12 7 15 15 C 1.47514 * 120.00410 * 187.76570 * 13 12 7 16 16 C 1.39774 * 120.07206 * 190.70020 * 15 13 12 17 17 C 1.37626 * 119.93326 * 179.97438 * 16 15 13 18 18 C 1.50697 * 119.96798 * 179.97438 * 17 16 15 19 19 O 1.42897 * 109.47412 * 254.98201 * 18 17 16 20 20 Si 1.86303 * 109.46986 * 14.98356 * 18 17 16 21 21 C 1.39208 * 120.06749 * 359.97438 * 17 16 15 22 22 N 1.39052 * 119.92859 * 180.02562 * 21 17 16 23 23 C 1.46907 * 110.99433 * 239.99469 * 22 21 17 24 24 C 1.46894 * 111.00007 * 116.04401 * 22 21 17 25 25 C 1.39238 * 120.13661 * 0.28836 * 21 17 16 26 26 C 1.37592 * 120.06690 * 359.45425 * 25 21 17 27 27 H 1.09005 * 109.46738 * 299.99723 * 1 2 3 28 28 H 1.08996 * 109.47162 * 59.99656 * 1 2 3 29 29 H 1.08997 * 109.47460 * 180.02562 * 1 2 3 30 30 H 1.08999 * 112.83593 * 48.86145 * 5 3 2 31 31 H 1.08994 * 113.64896 * 25.03428 * 6 5 3 32 32 H 1.09004 * 113.72241 * 254.03865 * 6 5 3 33 33 H 1.08996 * 113.64628 * 139.58180 * 8 7 6 34 34 H 1.09005 * 113.64233 * 270.57374 * 8 7 6 35 35 H 1.08997 * 110.76121 * 9.89169 * 9 7 6 36 36 H 1.08999 * 110.76044 * 133.08554 * 9 7 6 37 37 H 1.08998 * 110.98746 * 83.11404 * 10 9 7 38 38 H 1.08998 * 110.98859 * 206.88338 * 10 9 7 39 39 H 1.08998 * 110.51189 * 278.16893 * 11 10 9 40 40 H 1.09003 * 110.33673 * 155.77259 * 11 10 9 41 41 H 1.07997 * 120.03250 * 0.02562 * 16 15 13 42 42 H 1.09004 * 109.47205 * 134.98168 * 18 17 16 43 43 H 0.96700 * 113.99739 * 299.99633 * 19 18 17 44 44 H 1.48495 * 109.99828 * 298.67797 * 20 18 17 45 45 H 1.48501 * 110.00002 * 59.99603 * 20 18 17 46 46 H 1.08996 * 109.47161 * 59.99847 * 23 22 21 47 47 H 1.09004 * 109.46824 * 300.00199 * 23 22 21 48 48 H 1.08996 * 109.46532 * 180.02562 * 23 22 21 49 49 H 1.09004 * 109.46880 * 183.95364 * 24 22 21 50 50 H 1.09000 * 109.46839 * 303.94354 * 24 22 21 51 51 H 1.08991 * 109.47534 * 63.95257 * 24 22 21 52 52 H 1.08001 * 119.96257 * 179.71064 * 25 21 17 53 53 H 1.08005 * 120.02887 * 180.26731 * 26 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2747 -0.0006 6 6 4.1077 2.7153 -0.0011 7 6 5.1680 2.2285 0.9911 8 6 4.1919 1.1206 1.3970 9 6 5.5109 3.2271 2.1086 10 6 6.9347 3.7062 1.7145 11 6 7.5425 2.4118 1.1110 12 7 6.4231 1.7707 0.3930 13 6 6.5377 0.9065 -0.6349 14 8 5.5460 0.5449 -1.2385 15 6 7.8660 0.3991 -1.0275 16 6 8.0191 -0.3137 -2.2200 17 6 9.2598 -0.7853 -2.5838 18 6 9.4256 -1.5543 -3.8691 19 8 9.5827 -2.9441 -3.5759 20 14 7.9183 -1.3115 -4.9369 21 6 10.3617 -0.5527 -1.7657 22 7 11.6141 -1.0300 -2.1363 23 6 12.1435 -1.9575 -1.1275 24 6 12.5495 0.0768 -2.3762 25 6 10.2115 0.1523 -0.5743 26 6 8.9747 0.6309 -0.2078 27 1 -0.3633 0.5138 0.8901 28 1 -0.3633 0.5139 -0.8899 29 1 -0.3634 -1.0276 0.0005 30 1 4.0231 0.6370 -0.7575 31 1 3.4149 3.4429 0.4214 32 1 4.5185 3.0291 -0.9608 33 1 4.6697 0.1543 1.5580 34 1 3.5224 1.4038 2.2093 35 1 4.8092 4.0611 2.1102 36 1 5.5219 2.7316 3.0794 37 1 6.8870 4.5028 0.9720 38 1 7.4957 4.0267 2.5924 39 1 7.9099 1.7576 1.9017 40 1 8.3464 2.6583 0.4173 41 1 7.1647 -0.4934 -2.8558 42 1 10.3075 -1.1926 -4.3978 43 1 10.3497 -3.1449 -3.0223 44 1 6.7137 -1.8299 -4.2404 45 1 7.7438 0.1298 -5.2490 46 1 11.4647 -2.8035 -1.0199 47 1 12.2349 -1.4413 -0.1718 48 1 13.1238 -2.3154 -1.4420 49 1 13.4998 -0.3213 -2.7321 50 1 12.1329 0.7482 -3.1271 51 1 12.7100 0.6247 -1.4477 52 1 11.0675 0.3271 0.0606 53 1 8.8597 1.1814 0.7143 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15736542_13422196.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:35:14 Heat of formation + Delta-G solvation = -32.323202 kcal Electronic energy + Delta-G solvation = -36368.695934 eV Core-core repulsion = 31789.246432 eV Total energy + Delta-G solvation = -4579.449503 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.192 amu Computer time = 1.62 seconds Orbital eigenvalues (eV) -42.86826 -41.68795 -41.09399 -39.28828 -37.91106 -37.71467 -37.52400 -36.60249 -33.43581 -32.52192 -31.22438 -29.90538 -28.57724 -28.39071 -27.10199 -26.95851 -26.44749 -25.41510 -23.99835 -23.12941 -22.64058 -21.91144 -21.44840 -19.51016 -19.11412 -18.59040 -18.21409 -17.85312 -17.59195 -17.55390 -17.29224 -17.08207 -16.50785 -16.24329 -16.10591 -15.93592 -15.69707 -15.46182 -15.19050 -14.96496 -14.75140 -14.62254 -14.48760 -14.15015 -14.04743 -13.83939 -13.83011 -13.59567 -13.51698 -13.30606 -13.11933 -13.07940 -12.99219 -12.78531 -12.70127 -12.66364 -12.37916 -12.15991 -11.97548 -11.95143 -11.71232 -11.51588 -11.37202 -11.26007 -11.06943 -10.68676 -10.24977 -10.02684 -9.81044 -9.62640 -4.94300 -0.53683 0.02056 0.98368 1.29645 1.42446 1.54807 1.58555 1.69351 1.90559 2.44351 2.68393 3.02459 3.22859 3.32361 3.40620 3.48171 3.51059 3.56977 3.66085 3.81550 3.89425 3.99356 4.04060 4.07735 4.09637 4.12968 4.17345 4.18436 4.31644 4.36747 4.39210 4.42411 4.44553 4.49404 4.56002 4.58372 4.59534 4.60362 4.66066 4.66850 4.81044 4.83324 4.87952 4.94560 4.98283 4.99029 5.00285 5.06445 5.12621 5.16037 5.23268 5.26309 5.33842 5.43869 5.76677 6.15352 6.20707 6.57330 6.65620 6.96186 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.368 6.368 3 C 0.469 3.531 4 O -0.541 6.541 5 C -0.156 4.156 6 C -0.114 4.114 7 C 0.147 3.853 8 C -0.113 4.113 9 C -0.112 4.112 10 C -0.127 4.127 11 C 0.078 3.922 12 N -0.588 5.588 13 C 0.570 3.430 14 O -0.561 6.561 15 C -0.145 4.145 16 C -0.079 4.079 17 C -0.114 4.114 18 C -0.061 4.061 19 O -0.544 6.544 20 Si 0.791 3.209 21 C 0.133 3.867 22 N -0.524 5.524 23 C 0.022 3.978 24 C 0.026 3.974 25 C -0.148 4.148 26 C -0.083 4.083 27 H 0.066 0.934 28 H 0.058 0.942 29 H 0.129 0.871 30 H 0.169 0.831 31 H 0.104 0.896 32 H 0.061 0.939 33 H 0.078 0.922 34 H 0.108 0.892 35 H 0.092 0.908 36 H 0.101 0.899 37 H 0.075 0.925 38 H 0.117 0.883 39 H 0.107 0.893 40 H 0.101 0.899 41 H 0.111 0.889 42 H 0.096 0.904 43 H 0.374 0.626 44 H -0.301 1.301 45 H -0.274 1.274 46 H 0.069 0.931 47 H 0.044 0.956 48 H 0.092 0.908 49 H 0.090 0.910 50 H 0.064 0.936 51 H 0.045 0.955 52 H 0.159 0.841 53 H 0.184 0.816 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.448 1.562 5.463 11.893 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.285 6.285 3 C 0.314 3.686 4 O -0.431 6.431 5 C -0.174 4.174 6 C -0.153 4.153 7 C 0.061 3.939 8 C -0.151 4.151 9 C -0.150 4.150 10 C -0.165 4.165 11 C -0.043 4.043 12 N -0.319 5.319 13 C 0.362 3.638 14 O -0.443 6.443 15 C -0.148 4.148 16 C -0.099 4.099 17 C -0.115 4.115 18 C -0.171 4.171 19 O -0.351 6.351 20 Si 0.696 3.304 21 C 0.038 3.962 22 N -0.246 5.246 23 C -0.124 4.124 24 C -0.120 4.120 25 C -0.168 4.168 26 C -0.101 4.101 27 H 0.084 0.916 28 H 0.077 0.923 29 H 0.147 0.853 30 H 0.184 0.816 31 H 0.122 0.878 32 H 0.080 0.920 33 H 0.097 0.903 34 H 0.126 0.874 35 H 0.111 0.889 36 H 0.120 0.880 37 H 0.094 0.906 38 H 0.135 0.865 39 H 0.125 0.875 40 H 0.119 0.881 41 H 0.129 0.871 42 H 0.114 0.886 43 H 0.224 0.776 44 H -0.229 1.229 45 H -0.201 1.201 46 H 0.088 0.912 47 H 0.062 0.938 48 H 0.111 0.889 49 H 0.109 0.891 50 H 0.083 0.917 51 H 0.064 0.936 52 H 0.177 0.823 53 H 0.201 0.799 Dipole moment (debyes) X Y Z Total from point charges 8.420 1.676 4.217 9.565 hybrid contribution -0.128 0.670 1.552 1.695 sum 8.292 2.346 5.769 10.370 Atomic orbital electron populations 1.23539 0.75069 1.05617 1.02493 1.86544 1.24895 1.33464 1.83552 1.24333 0.92728 0.80899 0.70620 1.90605 1.67987 1.37202 1.47303 1.24040 0.85629 1.03185 1.04507 1.23142 0.97386 0.94511 1.00240 1.21500 0.83733 0.94825 0.93804 1.23164 0.97573 1.00030 0.94353 1.22569 0.98395 0.97473 0.96554 1.22947 0.95177 0.95809 1.02539 1.23326 0.89144 0.94892 0.96888 1.48085 1.08553 1.43272 1.31974 1.18230 0.88692 0.77829 0.79007 1.90275 1.38414 1.61227 1.54407 1.19743 0.93529 1.04044 0.97526 1.21032 0.96734 0.96172 0.95913 1.20313 0.91984 1.00656 0.98583 1.25010 1.12251 0.83219 0.96663 1.86682 1.52820 1.21479 1.74105 0.92829 0.72315 0.78951 0.86278 1.18969 0.90760 0.94072 0.92364 1.59447 1.00678 1.18476 1.45997 1.22606 1.01644 0.95501 0.92633 1.22533 0.96059 0.92123 1.01290 1.21966 0.98845 0.98698 0.97264 1.22526 0.90610 0.96710 1.00295 0.91569 0.92316 0.85322 0.81566 0.87816 0.92019 0.90335 0.87378 0.88904 0.88015 0.90583 0.86487 0.87502 0.88130 0.87130 0.88621 0.77628 1.22915 1.20080 0.91221 0.93757 0.88942 0.89105 0.91718 0.93650 0.82309 0.79934 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.14 10.56 113.37 1.20 1.34 16 2 O -0.37 -4.43 10.56 -51.42 -0.54 -4.97 16 3 C 0.47 6.38 7.48 71.24 0.53 6.92 16 4 O -0.54 -9.46 15.64 21.97 0.34 -9.11 16 5 C -0.16 -1.61 3.61 -10.94 -0.04 -1.65 16 6 C -0.11 -0.79 6.36 30.95 0.20 -0.59 16 7 C 0.15 0.13 1.44 3.97 0.01 0.14 16 8 C -0.11 -0.41 6.84 30.94 0.21 -0.20 16 9 C -0.11 0.72 6.30 31.64 0.20 0.92 16 10 C -0.13 1.24 7.10 32.15 0.23 1.47 16 11 C 0.08 -0.63 4.91 86.93 0.43 -0.21 16 12 N -0.59 -0.48 3.17 -769.80 -2.44 -2.92 16 13 C 0.57 4.47 7.48 86.69 0.65 5.12 16 14 O -0.56 -8.61 11.98 -4.02 -0.05 -8.66 16 15 C -0.15 -0.76 5.84 -20.08 -0.12 -0.88 16 16 C -0.08 -0.72 8.19 22.50 0.18 -0.54 16 17 C -0.11 -0.57 5.28 -19.78 -0.10 -0.67 16 18 C -0.06 -0.24 2.29 71.24 0.16 -0.08 16 19 O -0.54 -2.70 12.65 -148.98 -1.89 -4.58 16 20 Si 0.79 4.58 30.40 68.60 2.09 6.66 16 21 C 0.13 -0.04 4.65 38.47 0.18 0.14 16 22 N -0.52 2.01 3.67 -745.10 -2.73 -0.72 16 23 C 0.02 -0.16 9.20 127.69 1.17 1.02 16 24 C 0.03 -0.17 9.32 127.69 1.19 1.02 16 25 C -0.15 0.58 8.58 22.36 0.19 0.77 16 26 C -0.08 0.23 8.26 22.50 0.19 0.42 16 27 H 0.07 0.30 8.13 -2.38 -0.02 0.28 16 28 H 0.06 0.36 8.13 -2.39 -0.02 0.34 16 29 H 0.13 -0.09 8.14 -2.39 -0.02 -0.11 16 30 H 0.17 2.56 4.14 -75.89 -0.31 2.25 16 31 H 0.10 0.69 7.21 -2.39 -0.02 0.68 16 32 H 0.06 0.62 8.14 -2.38 -0.02 0.60 16 33 H 0.08 0.34 8.14 -2.39 -0.02 0.32 16 34 H 0.11 0.11 8.08 -2.38 -0.02 0.09 16 35 H 0.09 -0.59 7.79 -2.39 -0.02 -0.60 16 36 H 0.10 -0.93 8.11 -2.39 -0.02 -0.95 16 37 H 0.08 -0.61 8.14 -2.39 -0.02 -0.63 16 38 H 0.12 -1.68 8.14 -2.39 -0.02 -1.70 16 39 H 0.11 -1.36 7.17 -2.39 -0.02 -1.38 16 40 H 0.10 -0.99 6.24 -2.39 -0.01 -1.00 16 41 H 0.11 1.55 4.54 -2.91 -0.01 1.54 16 42 H 0.10 0.08 7.78 -2.38 -0.02 0.06 16 43 H 0.37 0.11 8.05 -74.06 -0.60 -0.49 16 44 H -0.30 -4.34 6.81 99.48 0.68 -3.66 16 45 H -0.27 -2.57 7.11 99.48 0.71 -1.87 16 46 H 0.07 -0.41 7.84 -2.39 -0.02 -0.43 16 47 H 0.04 -0.38 7.08 -2.38 -0.02 -0.39 16 48 H 0.09 -0.84 8.14 -2.39 -0.02 -0.86 16 49 H 0.09 -0.76 8.14 -2.38 -0.02 -0.78 16 50 H 0.06 -0.30 8.12 -2.39 -0.02 -0.32 16 51 H 0.04 -0.38 7.46 -2.39 -0.02 -0.40 16 52 H 0.16 -1.49 7.01 -2.91 -0.02 -1.51 16 53 H 0.18 -1.71 3.46 -2.91 -0.01 -1.72 16 Total: 0.00 -24.01 409.01 1.49 -22.52 By element: Atomic # 1 Polarization: -12.70 SS G_CDS: 0.06 Total: -12.65 kcal Atomic # 6 Polarization: 7.79 SS G_CDS: 6.65 Total: 14.44 kcal Atomic # 7 Polarization: 1.53 SS G_CDS: -5.17 Total: -3.64 kcal Atomic # 8 Polarization: -25.20 SS G_CDS: -2.13 Total: -27.33 kcal Atomic # 14 Polarization: 4.58 SS G_CDS: 2.09 Total: 6.66 kcal Total: -24.01 1.49 -22.52 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_13422196.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.805 kcal (2) G-P(sol) polarization free energy of solvation -24.013 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.818 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.495 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.518 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.323 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.62 seconds