Wall clock time and date at job start Sun Mar 7 2021 03:35:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34228 * 117.00267 * 2 1 4 4 O 1.20824 * 120.00058 * 359.97438 * 3 2 1 5 5 C 1.50702 * 120.00053 * 179.97438 * 3 2 1 6 6 C 1.53897 * 113.59806 * 179.97438 * 5 3 2 7 7 C 1.53142 * 86.89415 * 220.47083 * 6 5 3 8 8 C 1.53136 * 87.73741 * 25.07612 * 7 6 5 9 9 C 1.53782 * 114.73290 * 268.71223 * 7 6 5 10 10 C 1.55306 * 102.71490 * 251.55454 * 9 7 6 11 11 C 1.54968 * 101.69798 * 325.06128 * 10 9 7 12 12 N 1.46387 * 115.35735 * 142.20619 * 7 6 5 13 13 C 1.34775 * 125.79998 * 311.13058 * 12 7 6 14 14 O 1.21286 * 119.99890 * 359.97438 * 13 12 7 15 15 C 1.50694 * 120.00114 * 179.97438 * 13 12 7 16 16 C 1.53543 * 109.81984 * 279.13152 * 15 13 12 17 17 C 1.53032 * 108.56458 * 179.57376 * 16 15 13 18 18 C 1.50204 * 110.36374 * 49.47282 * 17 16 15 19 19 C 1.50699 * 118.54713 * 160.01517 * 18 17 16 20 20 O 1.42899 * 109.47154 * 299.97660 * 19 18 17 21 21 Si 1.86302 * 109.47091 * 179.97438 * 19 18 17 22 22 C 1.31114 * 122.90495 * 339.98922 * 18 17 16 23 23 N 1.38925 * 121.84922 * 0.40868 * 22 18 17 24 24 H 1.09001 * 109.46837 * 59.99672 * 1 2 3 25 25 H 1.08996 * 109.47284 * 180.02562 * 1 2 3 26 26 H 1.09000 * 109.46829 * 300.00591 * 1 2 3 27 27 H 1.08997 * 112.89126 * 311.19703 * 5 3 2 28 28 H 1.08996 * 113.64455 * 105.96306 * 6 5 3 29 29 H 1.09002 * 113.64137 * 334.96565 * 6 5 3 30 30 H 1.09004 * 113.64317 * 89.42256 * 8 7 6 31 31 H 1.08997 * 113.64658 * 220.42650 * 8 7 6 32 32 H 1.08998 * 110.74843 * 133.26389 * 9 7 6 33 33 H 1.09005 * 110.79206 * 9.86709 * 9 7 6 34 34 H 1.09002 * 110.99103 * 206.94692 * 10 9 7 35 35 H 1.09004 * 110.98737 * 83.17388 * 10 9 7 36 36 H 1.09000 * 110.36198 * 155.50556 * 11 10 9 37 37 H 1.09004 * 110.36350 * 277.81000 * 11 10 9 38 38 H 1.09000 * 109.81958 * 39.99006 * 15 13 12 39 39 H 1.08998 * 109.62394 * 299.23707 * 16 15 13 40 40 H 1.09004 * 109.62407 * 59.78900 * 16 15 13 41 41 H 1.09004 * 109.27576 * 289.22108 * 17 16 15 42 42 H 1.09004 * 109.20342 * 169.67969 * 17 16 15 43 43 H 1.08995 * 109.47576 * 59.97714 * 19 18 17 44 44 H 0.96701 * 114.00055 * 300.00241 * 20 19 18 45 45 H 1.48505 * 109.99688 * 58.67904 * 21 19 18 46 46 H 1.48502 * 109.99865 * 179.97438 * 21 19 18 47 47 H 1.07994 * 119.07485 * 180.38382 * 22 18 17 48 48 H 0.96994 * 120.55822 * 166.66322 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 0.0006 6 6 4.1079 2.7153 -0.0001 7 6 5.1680 2.2277 -0.9919 8 6 4.1920 1.1195 -1.3970 9 6 6.4736 1.7335 -0.3468 10 6 7.4823 2.8560 -0.7136 11 6 6.9885 3.2745 -2.1216 12 7 5.5174 3.1747 -2.0521 13 6 4.6442 3.8425 -2.8319 14 8 3.4514 3.6802 -2.6834 15 6 5.1497 4.7908 -3.8883 16 6 5.5127 6.1382 -3.2477 17 6 6.0317 7.0738 -4.3418 18 6 5.0886 7.0848 -5.5108 19 6 5.1493 8.2420 -6.4742 20 8 4.8766 9.4583 -5.7755 21 14 3.8808 7.9994 -7.8170 22 6 4.2152 6.1319 -5.7303 23 7 4.0951 5.0379 -4.8824 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3634 -1.0276 0.0005 26 1 -0.3633 0.5139 0.8899 27 1 4.0241 0.6366 0.7565 28 1 4.5183 3.0285 0.9598 29 1 3.4150 3.4426 -0.4234 30 1 3.5224 1.4021 -2.2095 31 1 4.6698 0.1530 -1.5571 32 1 6.7815 0.7813 -0.7788 33 1 6.3639 1.6510 0.7345 34 1 8.5000 2.4679 -0.7561 35 1 7.4129 3.6877 -0.0123 36 1 7.2893 4.2991 -2.3400 37 1 7.3794 2.5942 -2.8783 38 1 6.0264 4.3660 -4.3772 39 1 4.6273 6.5737 -2.7846 40 1 6.2868 5.9889 -2.4949 41 1 7.0123 6.7315 -4.6726 42 1 6.1188 8.0829 -3.9390 43 1 6.1433 8.2933 -6.9185 44 1 4.0067 9.4833 -5.3540 45 1 2.5243 7.8961 -7.2215 46 1 3.9301 9.1344 -8.7733 47 1 3.5708 6.1994 -6.5943 48 1 3.3283 4.4473 -4.9451 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15736542_15413834.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:35:38 Heat of formation + Delta-G solvation = -91.251664 kcal Electronic energy + Delta-G solvation = -30900.994405 eV Core-core repulsion = 26730.979472 eV Total energy + Delta-G solvation = -4170.014933 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -42.56151 -41.41579 -40.37177 -38.98723 -37.71773 -37.46749 -36.68967 -33.41970 -33.20673 -32.26809 -29.77622 -28.12995 -27.60397 -27.00901 -25.55688 -25.21950 -23.92952 -23.17205 -22.23125 -21.02326 -19.74029 -19.20476 -18.90521 -18.63954 -17.97650 -17.82581 -17.54712 -17.09358 -16.92068 -16.24613 -16.11111 -15.93960 -15.82928 -15.50824 -15.29208 -14.84508 -14.59313 -14.48388 -14.31095 -14.16285 -14.12048 -13.93927 -13.74081 -13.35968 -13.24734 -13.18255 -13.07649 -12.78314 -12.39273 -12.33439 -12.14630 -12.09476 -11.92116 -11.89233 -11.79082 -11.75474 -11.45391 -11.37867 -11.27029 -10.74223 -10.38076 -9.72667 -8.48978 -4.93928 1.03299 1.27920 1.36425 1.46863 1.55519 1.58384 1.83128 1.97471 2.56524 3.16377 3.27122 3.34618 3.48470 3.53160 3.59507 3.72437 3.76213 3.85260 3.90957 3.99985 4.10333 4.19014 4.19923 4.20618 4.28414 4.39392 4.42922 4.53687 4.57973 4.60301 4.65096 4.65880 4.70480 4.78923 4.81133 4.86769 4.94226 4.99232 5.02494 5.09763 5.18318 5.19945 5.27674 5.28269 5.36149 5.49045 5.56004 6.21674 6.41816 6.57871 6.62174 6.74876 7.00047 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.361 6.361 3 C 0.465 3.535 4 O -0.541 6.541 5 C -0.100 4.100 6 C -0.129 4.129 7 C 0.147 3.853 8 C -0.120 4.120 9 C -0.105 4.105 10 C -0.127 4.127 11 C 0.083 3.917 12 N -0.599 5.599 13 C 0.522 3.478 14 O -0.566 6.566 15 C 0.144 3.856 16 C -0.120 4.120 17 C -0.051 4.051 18 C -0.282 4.282 19 C -0.053 4.053 20 O -0.555 6.555 21 Si 0.742 3.258 22 C 0.140 3.860 23 N -0.737 5.737 24 H 0.052 0.948 25 H 0.133 0.867 26 H 0.060 0.940 27 H 0.162 0.838 28 H 0.095 0.905 29 H 0.068 0.932 30 H 0.064 0.936 31 H 0.111 0.889 32 H 0.103 0.897 33 H 0.102 0.898 34 H 0.111 0.889 35 H 0.076 0.924 36 H 0.093 0.907 37 H 0.092 0.908 38 H 0.114 0.886 39 H 0.047 0.953 40 H 0.098 0.902 41 H 0.084 0.916 42 H 0.069 0.931 43 H 0.118 0.882 44 H 0.381 0.619 45 H -0.297 1.297 46 H -0.309 1.309 47 H 0.142 0.858 48 H 0.405 0.595 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.792 -7.059 1.058 11.324 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.277 6.277 3 C 0.309 3.691 4 O -0.431 6.431 5 C -0.119 4.119 6 C -0.167 4.167 7 C 0.062 3.938 8 C -0.158 4.158 9 C -0.143 4.143 10 C -0.165 4.165 11 C -0.038 4.038 12 N -0.331 5.331 13 C 0.310 3.690 14 O -0.445 6.445 15 C 0.035 3.965 16 C -0.159 4.159 17 C -0.088 4.088 18 C -0.292 4.292 19 C -0.163 4.163 20 O -0.362 6.362 21 Si 0.650 3.350 22 C 0.019 3.981 23 N -0.370 5.370 24 H 0.071 0.929 25 H 0.152 0.848 26 H 0.079 0.921 27 H 0.180 0.820 28 H 0.113 0.887 29 H 0.087 0.913 30 H 0.083 0.917 31 H 0.129 0.871 32 H 0.122 0.878 33 H 0.120 0.880 34 H 0.130 0.870 35 H 0.095 0.905 36 H 0.111 0.889 37 H 0.110 0.890 38 H 0.131 0.869 39 H 0.066 0.934 40 H 0.116 0.884 41 H 0.103 0.897 42 H 0.087 0.913 43 H 0.136 0.864 44 H 0.229 0.771 45 H -0.224 1.224 46 H -0.238 1.238 47 H 0.159 0.841 48 H 0.241 0.759 Dipole moment (debyes) X Y Z Total from point charges 7.897 -6.374 0.546 10.163 hybrid contribution -1.951 0.934 0.796 2.306 sum 5.946 -5.440 1.342 8.170 Atomic orbital electron populations 1.23501 0.75312 1.05655 1.02075 1.86504 1.24564 1.33005 1.83677 1.24213 0.92991 0.80943 0.70925 1.90677 1.68058 1.37788 1.46559 1.22554 0.85478 1.01296 1.02598 1.23276 0.97848 0.94786 1.00796 1.22040 0.95440 0.88852 0.87500 1.23209 0.97736 1.00846 0.94039 1.22541 0.89835 0.99842 1.02073 1.22846 1.00322 0.98573 0.94751 1.22861 0.77218 1.03775 0.99905 1.48370 1.08299 1.42209 1.34178 1.20648 0.85538 0.80487 0.82318 1.90757 1.17332 1.65919 1.70496 1.21067 0.91952 0.95024 0.88422 1.21824 1.01736 0.93590 0.98704 1.19943 0.97697 0.99218 0.91943 1.20946 1.06875 0.98378 1.03021 1.24805 1.09071 0.83395 0.99056 1.86529 1.40188 1.38035 1.71453 0.94769 0.76010 0.86466 0.77753 1.20494 0.97774 0.87158 0.92661 1.44406 1.25701 1.30388 1.36478 0.92872 0.84850 0.92099 0.82028 0.88675 0.91303 0.91713 0.87081 0.87825 0.87960 0.87024 0.90495 0.88870 0.88987 0.86887 0.93418 0.88375 0.89732 0.91282 0.86446 0.77084 1.22426 1.23810 0.84087 0.75909 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.08 10.56 113.37 1.20 1.28 16 2 O -0.36 -2.41 10.57 -51.40 -0.54 -2.96 16 3 C 0.46 4.39 7.48 71.24 0.53 4.92 16 4 O -0.54 -9.65 15.64 21.97 0.34 -9.31 16 5 C -0.10 -0.11 4.07 -10.93 -0.04 -0.15 16 6 C -0.13 -0.37 6.44 30.94 0.20 -0.17 16 7 C 0.15 -0.41 1.34 3.98 0.01 -0.40 16 8 C -0.12 -0.01 6.77 30.95 0.21 0.20 16 9 C -0.11 1.12 6.08 31.65 0.19 1.32 16 10 C -0.13 1.55 7.09 32.06 0.23 1.78 16 11 C 0.08 -0.83 6.43 86.84 0.56 -0.27 16 12 N -0.60 1.27 3.17 -766.54 -2.43 -1.16 16 13 C 0.52 2.00 6.77 87.66 0.59 2.59 16 14 O -0.57 -7.43 13.26 -3.05 -0.04 -7.47 16 15 C 0.14 -0.07 2.61 44.33 0.12 0.04 16 16 C -0.12 0.10 5.37 30.79 0.17 0.27 16 17 C -0.05 0.05 5.83 29.70 0.17 0.22 16 18 C -0.28 -0.15 5.45 -16.76 -0.09 -0.24 16 19 C -0.05 -0.06 2.83 71.24 0.20 0.14 16 20 O -0.55 -2.80 12.54 -148.98 -1.87 -4.67 16 21 Si 0.74 0.58 29.68 68.60 2.04 2.62 16 22 C 0.14 0.08 9.63 83.42 0.80 0.89 16 23 N -0.74 -1.49 5.47 -329.02 -1.80 -3.29 16 24 H 0.05 0.26 8.13 -2.39 -0.02 0.24 16 25 H 0.13 -0.52 8.14 -2.39 -0.02 -0.54 16 26 H 0.06 0.20 8.13 -2.39 -0.02 0.18 16 27 H 0.16 -1.02 8.14 -2.39 -0.02 -1.04 16 28 H 0.09 -0.09 8.01 -2.39 -0.02 -0.11 16 29 H 0.07 0.89 5.82 -2.39 -0.01 0.88 16 30 H 0.06 0.51 6.68 -2.38 -0.02 0.50 16 31 H 0.11 -0.59 8.01 -2.39 -0.02 -0.61 16 32 H 0.10 -1.37 8.01 -2.39 -0.02 -1.39 16 33 H 0.10 -1.28 7.86 -2.38 -0.02 -1.30 16 34 H 0.11 -1.75 8.14 -2.39 -0.02 -1.77 16 35 H 0.08 -0.84 8.14 -2.38 -0.02 -0.86 16 36 H 0.09 -1.11 6.15 -2.39 -0.01 -1.12 16 37 H 0.09 -1.14 8.14 -2.39 -0.02 -1.16 16 38 H 0.11 -0.57 7.70 -2.39 -0.02 -0.59 16 39 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 40 H 0.10 -0.51 6.64 -2.38 -0.02 -0.52 16 41 H 0.08 -0.35 8.14 -2.39 -0.02 -0.37 16 42 H 0.07 0.09 7.83 -2.38 -0.02 0.08 16 43 H 0.12 -0.09 7.96 -2.39 -0.02 -0.11 16 44 H 0.38 0.27 8.70 -74.06 -0.64 -0.37 16 45 H -0.30 -1.79 7.10 99.48 0.71 -1.09 16 46 H -0.31 -2.78 7.11 99.48 0.71 -2.08 16 47 H 0.14 -0.29 4.37 -2.91 -0.01 -0.30 16 48 H 0.40 1.50 8.10 -92.71 -0.75 0.75 16 Total: 0.00 -26.68 374.39 0.38 -26.30 By element: Atomic # 1 Polarization: -12.12 SS G_CDS: -0.36 Total: -12.48 kcal Atomic # 6 Polarization: 7.37 SS G_CDS: 5.04 Total: 12.41 kcal Atomic # 7 Polarization: -0.22 SS G_CDS: -4.23 Total: -4.45 kcal Atomic # 8 Polarization: -22.30 SS G_CDS: -2.11 Total: -24.40 kcal Atomic # 14 Polarization: 0.58 SS G_CDS: 2.04 Total: 2.62 kcal Total: -26.68 0.38 -26.30 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_15413834.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.951 kcal (2) G-P(sol) polarization free energy of solvation -26.680 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.630 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.379 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.301 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.252 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds