Wall clock time and date at job start Sun Mar 7 2021 03:35:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34234 * 116.99938 * 2 1 4 4 O 1.20822 * 119.99973 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00068 * 179.97438 * 3 2 1 6 6 C 1.53899 * 113.59596 * 279.19659 * 5 3 2 7 7 C 1.53315 * 86.83253 * 220.49086 * 6 5 3 8 8 C 1.53134 * 87.75925 * 25.01052 * 7 6 5 9 9 C 1.53740 * 114.69653 * 268.65759 * 7 6 5 10 10 C 1.55304 * 102.73562 * 251.57672 * 9 7 6 11 11 C 1.54970 * 101.66399 * 325.01831 * 10 9 7 12 12 N 1.46378 * 115.40652 * 142.16167 * 7 6 5 13 13 C 1.34771 * 125.80072 * 311.05703 * 12 7 6 14 14 O 1.21283 * 120.00300 * 0.02562 * 13 12 7 15 15 C 1.50702 * 120.00326 * 179.97438 * 13 12 7 16 16 O 1.42901 * 109.47425 * 180.02562 * 15 13 12 17 17 C 1.35905 * 116.99982 * 180.02562 * 16 15 13 18 18 C 1.38709 * 120.05380 * 179.72372 * 17 16 15 19 19 C 1.50696 * 120.02764 * 359.97438 * 18 17 16 20 20 O 1.42901 * 109.47024 * 75.00345 * 19 18 17 21 21 Si 1.86299 * 109.46980 * 194.99685 * 19 18 17 22 22 C 1.38165 * 119.94040 * 179.67525 * 18 17 16 23 23 C 1.38249 * 120.05822 * 0.61848 * 22 18 17 24 24 C 1.38292 * 120.10928 * 359.67851 * 23 22 18 25 25 C 1.38128 * 120.05307 * 0.02562 * 24 23 22 26 26 H 1.09006 * 109.46832 * 179.97438 * 1 2 3 27 27 H 1.08996 * 109.47465 * 299.99911 * 1 2 3 28 28 H 1.08999 * 109.47008 * 59.99921 * 1 2 3 29 29 H 1.08997 * 112.83549 * 50.33146 * 5 3 2 30 30 H 1.09003 * 113.63917 * 334.95953 * 6 5 3 31 31 H 1.08998 * 113.65031 * 105.96079 * 6 5 3 32 32 H 1.09007 * 113.64846 * 220.48724 * 8 7 6 33 33 H 1.09007 * 113.64655 * 89.49003 * 8 7 6 34 34 H 1.08997 * 110.76125 * 9.88666 * 9 7 6 35 35 H 1.09000 * 110.76188 * 133.07964 * 9 7 6 36 36 H 1.08999 * 110.98801 * 83.11076 * 10 9 7 37 37 H 1.08999 * 110.99036 * 206.88389 * 10 9 7 38 38 H 1.08998 * 110.36439 * 155.52736 * 11 10 9 39 39 H 1.09003 * 110.35896 * 277.72542 * 11 10 9 40 40 H 1.09005 * 109.46863 * 300.00025 * 15 13 12 41 41 H 1.08997 * 109.46999 * 59.99464 * 15 13 12 42 42 H 1.08998 * 109.47532 * 315.00197 * 19 18 17 43 43 H 0.96692 * 114.00451 * 59.99962 * 20 19 18 44 44 H 1.48505 * 110.00123 * 58.68257 * 21 19 18 45 45 H 1.48501 * 109.99900 * 179.97438 * 21 19 18 46 46 H 1.07996 * 119.97389 * 180.31951 * 22 18 17 47 47 H 1.07994 * 119.94973 * 179.69723 * 23 22 18 48 48 H 1.07997 * 119.97258 * 180.02562 * 24 23 22 49 49 H 1.08001 * 120.02712 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.1927 1.0824 1.3931 7 6 5.1685 2.2030 1.0154 8 6 4.1077 2.7150 0.0369 9 6 6.4736 1.7242 0.3590 10 6 7.5278 1.9722 1.4721 11 6 6.9873 3.2655 2.1330 12 7 5.5184 3.1227 2.0991 13 6 4.6476 3.7350 2.9256 14 8 3.4567 3.5407 2.8036 15 6 5.1536 4.6602 4.0022 16 8 4.0471 5.1814 4.7412 17 6 4.3322 6.0393 5.7560 18 6 3.3059 6.5875 6.5111 19 6 1.8733 6.2330 6.2067 20 8 1.5993 4.9117 6.6770 21 14 0.7400 7.4423 7.0575 22 6 3.5987 7.4541 7.5466 23 6 4.9125 7.7849 7.8222 24 6 5.9371 7.2445 7.0669 25 6 5.6499 6.3728 6.0345 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3634 0.5138 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 4.0226 0.6566 -0.7724 30 1 3.5237 1.3432 2.2132 31 1 4.6708 0.1120 1.5271 32 1 4.5176 3.0521 -0.9153 33 1 3.4149 3.4315 0.4785 34 1 6.4154 0.6644 0.1113 35 1 6.6989 2.3150 -0.5289 36 1 7.5447 1.1474 2.1845 37 1 8.5167 2.1358 1.0439 38 1 7.3375 3.3403 3.1625 39 1 7.2981 4.1411 1.5629 40 1 5.8121 4.1098 4.6743 41 1 5.7053 5.4818 3.5453 42 1 1.7090 6.2767 5.1301 43 1 1.7249 4.7992 7.6291 44 1 1.0364 8.8239 6.6007 45 1 -0.6760 7.1039 6.7646 46 1 2.8004 7.8773 8.1382 47 1 5.1391 8.4663 8.6288 48 1 6.9626 7.5041 7.2843 49 1 6.4504 5.9507 5.4452 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15736542_2989392.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:35:50 Heat of formation + Delta-G solvation = -114.319532 kcal Electronic energy + Delta-G solvation = -33629.977327 eV Core-core repulsion = 29104.791153 eV Total energy + Delta-G solvation = -4525.186174 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.165 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -42.46599 -41.46639 -40.90200 -39.40094 -38.19878 -37.47526 -37.33983 -36.61230 -33.03718 -32.65645 -31.25990 -29.90105 -29.13477 -28.07313 -26.94374 -26.59137 -25.41159 -23.95680 -23.30523 -22.57116 -22.11837 -20.82447 -19.63513 -19.16220 -18.52837 -18.06365 -17.80955 -17.76296 -17.51336 -17.20049 -16.88067 -16.83744 -16.50783 -16.10934 -15.86985 -15.54966 -15.24679 -15.21207 -14.95707 -14.69413 -14.55582 -14.45297 -14.08333 -13.99143 -13.84784 -13.71305 -13.51904 -13.41609 -13.16192 -13.00405 -12.84527 -12.52408 -12.35579 -12.27670 -12.18251 -12.06090 -11.97645 -11.94455 -11.65046 -11.64834 -11.60123 -11.12765 -10.67085 -10.22133 -9.99809 -9.76651 -9.21301 -4.95152 0.20609 0.39723 1.28807 1.39349 1.41252 1.49440 1.74508 1.88681 2.10323 2.42331 2.67510 3.10652 3.20704 3.28185 3.47830 3.51622 3.54658 3.60990 3.73077 3.78075 3.80450 3.87715 3.90282 3.93289 4.01814 4.13895 4.17838 4.25204 4.30575 4.30804 4.33281 4.39088 4.50270 4.51653 4.54198 4.63770 4.69170 4.71352 4.72542 4.74995 4.87219 4.92598 4.96318 4.97681 5.04590 5.25116 5.30886 5.46515 5.48106 5.58110 5.68655 6.25523 6.36618 6.79853 6.95046 7.07060 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.360 6.360 3 C 0.470 3.530 4 O -0.496 6.496 5 C -0.104 4.104 6 C -0.123 4.123 7 C 0.145 3.855 8 C -0.123 4.123 9 C -0.110 4.110 10 C -0.131 4.131 11 C 0.092 3.908 12 N -0.605 5.605 13 C 0.531 3.469 14 O -0.496 6.496 15 C 0.045 3.955 16 O -0.278 6.278 17 C 0.152 3.848 18 C -0.149 4.149 19 C -0.057 4.057 20 O -0.531 6.531 21 Si 0.682 3.318 22 C -0.075 4.075 23 C -0.152 4.152 24 C -0.073 4.073 25 C -0.212 4.212 26 H 0.102 0.898 27 H 0.064 0.936 28 H 0.063 0.937 29 H 0.127 0.873 30 H 0.103 0.897 31 H 0.086 0.914 32 H 0.082 0.918 33 H 0.111 0.889 34 H 0.091 0.909 35 H 0.087 0.913 36 H 0.081 0.919 37 H 0.090 0.910 38 H 0.079 0.921 39 H 0.076 0.924 40 H 0.093 0.907 41 H 0.092 0.908 42 H 0.114 0.886 43 H 0.372 0.628 44 H -0.257 1.257 45 H -0.254 1.254 46 H 0.136 0.864 47 H 0.130 0.870 48 H 0.129 0.871 49 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.805 -1.257 2.103 9.140 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.277 6.277 3 C 0.312 3.688 4 O -0.382 6.382 5 C -0.123 4.123 6 C -0.162 4.162 7 C 0.060 3.940 8 C -0.161 4.161 9 C -0.148 4.148 10 C -0.169 4.169 11 C -0.030 4.030 12 N -0.340 5.340 13 C 0.317 3.683 14 O -0.369 6.369 15 C -0.034 4.034 16 O -0.190 6.190 17 C 0.106 3.894 18 C -0.150 4.150 19 C -0.168 4.168 20 O -0.336 6.336 21 Si 0.584 3.416 22 C -0.092 4.092 23 C -0.170 4.170 24 C -0.091 4.091 25 C -0.231 4.231 26 H 0.120 0.880 27 H 0.082 0.918 28 H 0.081 0.919 29 H 0.145 0.855 30 H 0.121 0.879 31 H 0.105 0.895 32 H 0.101 0.899 33 H 0.130 0.870 34 H 0.109 0.891 35 H 0.105 0.895 36 H 0.099 0.901 37 H 0.109 0.891 38 H 0.097 0.903 39 H 0.094 0.906 40 H 0.111 0.889 41 H 0.110 0.890 42 H 0.131 0.869 43 H 0.219 0.781 44 H -0.182 1.182 45 H -0.179 1.179 46 H 0.153 0.847 47 H 0.148 0.852 48 H 0.147 0.853 49 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 6.888 -0.553 1.307 7.032 hybrid contribution 0.529 -0.059 -0.603 0.804 sum 7.417 -0.612 0.704 7.475 Atomic orbital electron populations 1.23292 0.76135 1.03795 1.02705 1.86494 1.23590 1.33437 1.84130 1.23403 0.91548 0.81430 0.72405 1.90700 1.66808 1.36383 1.44292 1.22305 0.87897 1.00868 1.01275 1.23324 0.97945 0.99056 0.95836 1.21931 0.94528 0.90107 0.87409 1.23360 0.97594 0.95381 0.99749 1.22457 0.91512 1.02785 0.98080 1.22808 0.99049 0.97109 0.97967 1.22510 0.79439 0.99208 1.01867 1.48171 1.07035 1.46119 1.32714 1.19665 0.86058 0.80820 0.81716 1.90825 1.14993 1.61218 1.69852 1.22438 0.89482 0.97711 0.93770 1.86238 1.32066 1.57938 1.42728 1.18804 0.92860 0.89865 0.87906 1.19740 0.95469 1.01508 0.98298 1.24944 0.95485 0.92258 1.04131 1.86609 1.90701 1.28225 1.28025 0.95302 0.78876 0.77173 0.90260 1.20863 0.97115 0.95876 0.95349 1.21077 0.92252 1.02188 1.01458 1.21020 0.99662 0.94708 0.93694 1.21286 0.94902 1.04336 1.02590 0.87957 0.91771 0.91870 0.85511 0.87882 0.89525 0.89938 0.87048 0.89050 0.89484 0.90065 0.89125 0.90305 0.90584 0.88941 0.89045 0.86901 0.78126 1.18168 1.17875 0.84678 0.85165 0.85335 0.85375 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.06 10.56 101.05 1.07 1.13 16 2 O -0.36 -1.39 10.57 -39.27 -0.41 -1.80 16 3 C 0.47 2.30 7.48 36.01 0.27 2.57 16 4 O -0.50 -4.18 15.65 -18.75 -0.29 -4.48 16 5 C -0.10 -0.14 4.06 -90.84 -0.37 -0.51 16 6 C -0.12 -0.14 6.68 -26.10 -0.17 -0.31 16 7 C 0.15 -0.04 1.34 -131.27 -0.18 -0.21 16 8 C -0.12 -0.22 6.54 -26.20 -0.17 -0.39 16 9 C -0.11 0.39 6.08 -25.12 -0.15 0.24 16 10 C -0.13 0.59 7.09 -24.47 -0.17 0.42 16 11 C 0.09 -0.33 6.71 -2.39 -0.02 -0.35 16 12 N -0.60 -0.04 3.17 -156.15 -0.49 -0.54 16 13 C 0.53 1.66 7.59 -10.99 -0.08 1.58 16 14 O -0.50 -3.94 13.69 -14.36 -0.20 -4.14 16 15 C 0.04 0.03 4.24 36.01 0.15 0.19 16 16 O -0.28 -1.24 9.00 -39.35 -0.35 -1.59 16 17 C 0.15 0.43 6.66 -39.22 -0.26 0.17 16 18 C -0.15 -0.35 5.27 -104.48 -0.55 -0.90 16 19 C -0.06 -0.18 2.38 36.00 0.09 -0.09 16 20 O -0.53 -2.03 12.88 -35.23 -0.45 -2.48 16 21 Si 0.68 0.65 29.92 -169.99 -5.09 -4.44 16 22 C -0.07 -0.01 8.66 -39.60 -0.34 -0.35 16 23 C -0.15 0.09 10.04 -39.56 -0.40 -0.31 16 24 C -0.07 0.04 10.04 -39.60 -0.40 -0.36 16 25 C -0.21 -0.07 9.04 -39.43 -0.36 -0.43 16 26 H 0.10 -0.09 8.14 -51.93 -0.42 -0.52 16 27 H 0.06 0.17 8.13 -51.93 -0.42 -0.26 16 28 H 0.06 0.11 8.13 -51.93 -0.42 -0.31 16 29 H 0.13 -0.21 8.14 -51.93 -0.42 -0.63 16 30 H 0.10 0.47 6.50 -51.93 -0.34 0.13 16 31 H 0.09 -0.08 8.01 -51.93 -0.42 -0.50 16 32 H 0.08 0.00 8.01 -51.93 -0.42 -0.42 16 33 H 0.11 0.65 6.03 -51.92 -0.31 0.34 16 34 H 0.09 -0.41 7.85 -51.93 -0.41 -0.81 16 35 H 0.09 -0.36 8.01 -51.93 -0.42 -0.77 16 36 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 37 H 0.09 -0.52 8.14 -51.93 -0.42 -0.95 16 38 H 0.08 -0.40 7.50 -51.93 -0.39 -0.79 16 39 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 40 H 0.09 -0.16 7.38 -51.93 -0.38 -0.55 16 41 H 0.09 -0.15 7.66 -51.93 -0.40 -0.55 16 42 H 0.11 0.61 7.83 -51.93 -0.41 0.20 16 43 H 0.37 -0.32 8.70 45.56 0.40 0.08 16 44 H -0.26 -0.80 7.11 56.52 0.40 -0.39 16 45 H -0.25 -1.11 7.11 56.52 0.40 -0.71 16 46 H 0.14 -0.33 5.14 -52.49 -0.27 -0.60 16 47 H 0.13 -0.35 8.06 -52.49 -0.42 -0.78 16 48 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 49 H 0.13 -0.27 6.30 -52.49 -0.33 -0.60 16 LS Contribution 397.56 15.07 5.99 5.99 Total: 0.00 -12.63 397.56 -10.44 -23.07 By element: Atomic # 1 Polarization: -4.59 SS G_CDS: -7.09 Total: -11.68 kcal Atomic # 6 Polarization: 4.13 SS G_CDS: -2.05 Total: 2.08 kcal Atomic # 7 Polarization: -0.04 SS G_CDS: -0.49 Total: -0.54 kcal Atomic # 8 Polarization: -12.78 SS G_CDS: -1.71 Total: -14.49 kcal Atomic # 14 Polarization: 0.65 SS G_CDS: -5.09 Total: -4.44 kcal Total LS contribution 5.99 Total: 5.99 kcal Total: -12.63 -10.44 -23.07 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_2989392.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.245 kcal (2) G-P(sol) polarization free energy of solvation -12.635 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.880 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.440 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.075 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.320 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds