Wall clock time and date at job start Sun Mar 7 2021 03:35:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34231 * 116.99767 * 2 1 4 4 O 1.20829 * 119.99835 * 0.02562 * 3 2 1 5 5 C 1.50701 * 120.00102 * 180.02562 * 3 2 1 6 6 C 1.53896 * 113.59858 * 180.02562 * 5 3 2 7 7 C 1.53134 * 86.89436 * 139.54095 * 6 5 3 8 8 C 1.53144 * 87.73279 * 334.91905 * 7 6 5 9 9 C 1.53747 * 114.79121 * 91.25248 * 7 6 5 10 10 C 1.55299 * 102.73285 * 152.10397 * 9 7 6 11 11 C 1.54969 * 101.66384 * 325.00496 * 10 9 7 12 12 N 1.46375 * 115.39343 * 217.81711 * 7 6 5 13 13 C 1.34778 * 125.79763 * 51.25810 * 12 7 6 14 14 O 1.21279 * 120.00321 * 0.02562 * 13 12 7 15 15 C 1.50702 * 119.99802 * 179.97438 * 13 12 7 16 16 O 1.42904 * 109.47132 * 179.97438 * 15 13 12 17 17 C 1.35895 * 117.00020 * 180.02562 * 16 15 13 18 18 C 1.38734 * 120.05753 * 359.72479 * 17 16 15 19 19 C 1.38144 * 119.94122 * 179.74991 * 18 17 16 20 20 C 1.38267 * 120.06057 * 0.50582 * 19 18 17 21 21 C 1.50691 * 119.94539 * 179.75084 * 20 19 18 22 22 O 1.42902 * 109.46941 * 245.01977 * 21 20 19 23 23 Si 1.86303 * 109.47324 * 5.01936 * 21 20 19 24 24 C 1.38263 * 120.10561 * 359.76640 * 20 19 18 25 25 C 1.38141 * 120.06227 * 359.97438 * 24 20 19 26 26 H 1.08994 * 109.47000 * 299.99209 * 1 2 3 27 27 H 1.09001 * 109.47643 * 59.99592 * 1 2 3 28 28 H 1.09003 * 109.46980 * 179.97438 * 1 2 3 29 29 H 1.09007 * 112.83238 * 48.86526 * 5 3 2 30 30 H 1.09000 * 113.64131 * 25.04212 * 6 5 3 31 31 H 1.08995 * 113.72776 * 254.05876 * 6 5 3 32 32 H 1.09007 * 113.64677 * 139.57921 * 8 7 6 33 33 H 1.08996 * 113.65173 * 270.57823 * 8 7 6 34 34 H 1.08998 * 110.75391 * 270.41533 * 9 7 6 35 35 H 1.08991 * 110.75807 * 33.60635 * 9 7 6 36 36 H 1.09002 * 110.99093 * 83.10286 * 10 9 7 37 37 H 1.09008 * 110.98645 * 206.87477 * 10 9 7 38 38 H 1.08993 * 110.36109 * 155.52818 * 11 10 9 39 39 H 1.09003 * 110.35814 * 277.72393 * 11 10 9 40 40 H 1.08990 * 109.47427 * 300.00009 * 15 13 12 41 41 H 1.09003 * 109.47418 * 60.00415 * 15 13 12 42 42 H 1.07998 * 120.02651 * 359.97438 * 18 17 16 43 43 H 1.07999 * 119.96925 * 180.23008 * 19 18 17 44 44 H 1.09001 * 109.47519 * 125.02114 * 21 20 19 45 45 H 0.96703 * 114.00333 * 60.00065 * 22 21 20 46 46 H 1.48504 * 109.99998 * 180.02562 * 23 21 20 47 47 H 1.48499 * 109.99745 * 301.31925 * 23 21 20 48 48 H 1.08002 * 119.96770 * 179.97438 * 24 20 19 49 49 H 1.08001 * 120.03197 * 179.97438 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5663 1.2750 -0.0006 6 6 4.1077 2.7156 0.0001 7 6 5.1680 2.2280 0.9916 8 6 4.1919 1.1197 1.3969 9 6 6.4734 1.7330 0.3478 10 6 7.5269 2.0079 1.4552 11 6 6.9865 3.3173 2.0836 12 7 5.5176 3.1741 2.0524 13 6 4.6464 3.8070 2.8629 14 8 3.4555 3.6101 2.7450 15 6 5.1522 4.7584 3.9166 16 8 4.0453 5.2990 4.6410 17 6 4.3300 6.1817 5.6343 18 6 5.6479 6.5162 5.9100 19 6 5.9343 7.4176 6.9168 20 6 4.9095 7.9784 7.6565 21 6 5.2252 8.9572 8.7579 22 8 4.8416 8.3986 10.0160 23 14 7.0541 9.3122 8.7679 24 6 3.5956 7.6424 7.3874 25 6 3.3036 6.7455 6.3781 26 1 -0.3633 0.5137 0.8900 27 1 -0.3634 0.5139 -0.8899 28 1 -0.3633 -1.0277 -0.0005 29 1 4.0230 0.6373 -0.7576 30 1 3.4148 3.4427 0.4235 31 1 4.5181 3.0304 -0.9593 32 1 4.6698 0.1532 1.5569 33 1 3.5225 1.4022 2.2094 34 1 6.4149 0.6674 0.1261 35 1 6.6993 2.3019 -0.5541 36 1 7.5431 1.2009 2.1877 37 1 8.5162 2.1606 1.0236 38 1 7.3360 3.4172 3.1112 39 1 7.2980 4.1784 1.4924 40 1 5.8099 4.2247 4.6025 41 1 5.7043 5.5683 3.4399 42 1 6.4490 6.0749 5.3356 43 1 6.9599 7.6812 7.1294 44 1 4.6762 9.8836 8.5892 45 1 5.2917 7.5705 10.2324 46 1 7.3785 10.2759 9.8502 47 1 7.8149 8.0523 8.9654 48 1 2.7969 8.0815 7.9668 49 1 2.2771 6.4831 6.1685 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15736542_2989410.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:35:54 Heat of formation + Delta-G solvation = -115.068543 kcal Electronic energy + Delta-G solvation = -32708.672808 eV Core-core repulsion = 28183.454155 eV Total energy + Delta-G solvation = -4525.218653 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.165 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -42.50980 -41.43018 -40.92133 -39.60291 -38.64943 -37.51533 -37.18849 -36.64372 -33.06624 -32.33636 -31.76802 -30.02402 -29.29612 -28.10997 -26.97831 -26.28534 -25.41578 -24.16229 -23.52815 -22.58769 -22.03046 -20.86276 -19.74932 -19.19168 -18.56592 -18.37120 -17.92618 -17.82544 -17.53567 -17.24141 -16.95592 -16.79317 -16.50388 -16.20503 -15.91747 -15.62153 -15.55763 -15.32763 -14.80282 -14.67042 -14.59533 -14.48632 -14.29877 -14.03930 -13.92171 -13.70015 -13.58907 -13.46191 -13.41546 -13.17094 -12.87795 -12.53736 -12.32596 -12.26615 -12.13278 -12.12393 -12.08589 -12.00163 -11.67909 -11.63430 -11.60481 -11.16217 -10.72976 -10.57796 -10.05170 -9.81022 -9.23976 -4.98590 0.27811 0.29051 1.24317 1.27755 1.35092 1.44095 1.55981 1.85407 1.94648 2.37913 2.64161 3.06919 3.17779 3.25267 3.39089 3.44268 3.48483 3.51481 3.64776 3.70114 3.76565 3.84310 3.85856 3.86627 3.90347 4.10923 4.15179 4.25306 4.27780 4.27928 4.35888 4.42475 4.48833 4.51659 4.52170 4.61056 4.64962 4.69020 4.69584 4.71924 4.83448 4.89785 4.93903 4.94569 5.01422 5.14366 5.24123 5.44563 5.49442 5.54908 5.67505 6.21852 6.32401 6.41289 6.91809 7.01061 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.360 6.360 3 C 0.470 3.530 4 O -0.495 6.495 5 C -0.104 4.104 6 C -0.123 4.123 7 C 0.145 3.855 8 C -0.123 4.123 9 C -0.111 4.111 10 C -0.132 4.132 11 C 0.092 3.908 12 N -0.604 5.604 13 C 0.531 3.469 14 O -0.500 6.500 15 C 0.045 3.955 16 O -0.288 6.288 17 C 0.135 3.865 18 C -0.207 4.207 19 C -0.077 4.077 20 C -0.155 4.155 21 C -0.070 4.070 22 O -0.530 6.530 23 Si 0.684 3.316 24 C -0.050 4.050 25 C -0.145 4.145 26 H 0.063 0.937 27 H 0.063 0.937 28 H 0.102 0.898 29 H 0.127 0.873 30 H 0.112 0.888 31 H 0.083 0.917 32 H 0.086 0.914 33 H 0.103 0.897 34 H 0.091 0.909 35 H 0.087 0.913 36 H 0.080 0.920 37 H 0.091 0.909 38 H 0.079 0.921 39 H 0.077 0.923 40 H 0.093 0.907 41 H 0.095 0.905 42 H 0.131 0.869 43 H 0.130 0.870 44 H 0.118 0.882 45 H 0.375 0.625 46 H -0.258 1.258 47 H -0.261 1.261 48 H 0.134 0.866 49 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.157 -2.159 -3.035 8.967 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.277 6.277 3 C 0.312 3.688 4 O -0.381 6.381 5 C -0.124 4.124 6 C -0.161 4.161 7 C 0.060 3.940 8 C -0.162 4.162 9 C -0.148 4.148 10 C -0.170 4.170 11 C -0.031 4.031 12 N -0.340 5.340 13 C 0.318 3.682 14 O -0.373 6.373 15 C -0.033 4.033 16 O -0.200 6.200 17 C 0.090 3.910 18 C -0.225 4.225 19 C -0.094 4.094 20 C -0.156 4.156 21 C -0.180 4.180 22 O -0.336 6.336 23 Si 0.586 3.414 24 C -0.068 4.068 25 C -0.164 4.164 26 H 0.082 0.918 27 H 0.082 0.918 28 H 0.120 0.880 29 H 0.145 0.855 30 H 0.130 0.870 31 H 0.101 0.899 32 H 0.105 0.895 33 H 0.121 0.879 34 H 0.109 0.891 35 H 0.106 0.894 36 H 0.099 0.901 37 H 0.109 0.891 38 H 0.097 0.903 39 H 0.095 0.905 40 H 0.111 0.889 41 H 0.113 0.887 42 H 0.148 0.852 43 H 0.147 0.853 44 H 0.135 0.865 45 H 0.223 0.777 46 H -0.183 1.183 47 H -0.186 1.186 48 H 0.152 0.848 49 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 7.376 -1.475 -2.612 7.963 hybrid contribution -0.327 -0.911 0.628 1.154 sum 7.049 -2.387 -1.984 7.702 Atomic orbital electron populations 1.23295 0.76112 1.03818 1.02712 1.86497 1.23611 1.33453 1.84125 1.23404 0.91550 0.81427 0.72426 1.90703 1.66794 1.36366 1.44277 1.22308 0.87911 1.00930 1.01230 1.23365 0.97583 0.95417 0.99730 1.21905 0.94561 0.89684 0.87836 1.23294 0.97958 0.99178 0.95759 1.22458 0.91478 1.02682 0.98227 1.22811 0.99092 0.96887 0.98176 1.22522 0.79347 0.99199 1.01986 1.48176 1.07085 1.44368 1.34338 1.19678 0.86036 0.80969 0.81529 1.90812 1.15054 1.62306 1.69120 1.22443 0.89361 0.97397 0.94121 1.86173 1.32547 1.56381 1.44923 1.19083 0.93542 0.89958 0.88427 1.21156 0.95128 1.03693 1.02560 1.20826 0.98628 0.95295 0.94677 1.20182 0.93905 1.01618 0.99862 1.24958 1.12874 0.97734 0.82466 1.86607 1.67829 1.43183 1.36025 0.95062 0.74398 0.82454 0.89482 1.20867 0.96224 0.94871 0.94866 1.20545 0.98912 0.99752 0.97185 0.91787 0.91827 0.87950 0.85505 0.86978 0.89887 0.89538 0.87906 0.89054 0.89427 0.90090 0.89086 0.90267 0.90455 0.88900 0.88719 0.85159 0.85262 0.86461 0.77703 1.18259 1.18641 0.84774 0.84629 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.04 10.56 101.05 1.07 1.11 16 2 O -0.36 -1.17 10.57 -39.26 -0.41 -1.58 16 3 C 0.47 1.97 7.48 36.01 0.27 2.24 16 4 O -0.50 -3.80 15.64 -18.75 -0.29 -4.09 16 5 C -0.10 -0.07 4.07 -90.84 -0.37 -0.44 16 6 C -0.12 -0.13 6.55 -26.20 -0.17 -0.30 16 7 C 0.15 -0.14 1.34 -131.36 -0.18 -0.31 16 8 C -0.12 -0.05 6.66 -26.19 -0.17 -0.22 16 9 C -0.11 0.45 6.08 -25.12 -0.15 0.30 16 10 C -0.13 0.67 7.09 -24.47 -0.17 0.49 16 11 C 0.09 -0.40 6.71 -2.39 -0.02 -0.41 16 12 N -0.60 0.44 3.17 -156.25 -0.49 -0.05 16 13 C 0.53 1.13 7.59 -10.98 -0.08 1.04 16 14 O -0.50 -3.39 13.68 -14.35 -0.20 -3.59 16 15 C 0.05 -0.02 4.24 36.01 0.15 0.14 16 16 O -0.29 -0.93 9.67 -39.32 -0.38 -1.31 16 17 C 0.14 0.27 6.69 -39.21 -0.26 0.00 16 18 C -0.21 0.05 9.04 -39.43 -0.36 -0.31 16 19 C -0.08 0.04 8.66 -39.61 -0.34 -0.31 16 20 C -0.16 -0.05 5.35 -104.61 -0.56 -0.61 16 21 C -0.07 0.01 2.80 36.00 0.10 0.11 16 22 O -0.53 -0.74 12.83 -35.23 -0.45 -1.19 16 23 Si 0.68 -0.77 29.88 -169.99 -5.08 -5.85 16 24 C -0.05 -0.05 9.68 -39.61 -0.38 -0.44 16 25 C -0.15 -0.29 9.99 -39.43 -0.39 -0.69 16 26 H 0.06 0.12 8.13 -51.93 -0.42 -0.31 16 27 H 0.06 0.07 8.13 -51.93 -0.42 -0.35 16 28 H 0.10 -0.15 8.14 -51.93 -0.42 -0.57 16 29 H 0.13 -0.28 8.14 -51.93 -0.42 -0.70 16 30 H 0.11 0.56 6.01 -51.93 -0.31 0.24 16 31 H 0.08 -0.06 8.01 -51.93 -0.42 -0.48 16 32 H 0.09 -0.14 8.01 -51.93 -0.42 -0.55 16 33 H 0.10 0.38 6.49 -51.93 -0.34 0.04 16 34 H 0.09 -0.45 7.86 -51.93 -0.41 -0.86 16 35 H 0.09 -0.41 8.01 -51.93 -0.42 -0.83 16 36 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 37 H 0.09 -0.57 8.14 -51.92 -0.42 -0.99 16 38 H 0.08 -0.46 7.50 -51.93 -0.39 -0.85 16 39 H 0.08 -0.40 8.14 -51.93 -0.42 -0.83 16 40 H 0.09 -0.26 7.37 -51.93 -0.38 -0.64 16 41 H 0.09 -0.26 7.67 -51.93 -0.40 -0.66 16 42 H 0.13 -0.38 6.30 -52.49 -0.33 -0.71 16 43 H 0.13 -0.31 4.83 -52.49 -0.25 -0.56 16 44 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 45 H 0.38 -0.52 8.70 45.56 0.40 -0.12 16 46 H -0.26 -0.60 7.11 56.52 0.40 -0.19 16 47 H -0.26 -0.15 7.00 56.52 0.40 0.25 16 48 H 0.13 0.03 8.06 -52.49 -0.42 -0.39 16 49 H 0.14 0.24 8.06 -52.49 -0.42 -0.19 16 LS Contribution 397.93 15.07 6.00 6.00 Total: 0.00 -11.44 397.93 -10.42 -21.86 By element: Atomic # 1 Polarization: -4.50 SS G_CDS: -7.08 Total: -11.58 kcal Atomic # 6 Polarization: 3.42 SS G_CDS: -2.03 Total: 1.40 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -0.49 Total: -0.05 kcal Atomic # 8 Polarization: -10.04 SS G_CDS: -1.74 Total: -11.77 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.08 Total: -5.85 kcal Total LS contribution 6.00 Total: 6.00 kcal Total: -11.44 -10.42 -21.86 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_2989410.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.208 kcal (2) G-P(sol) polarization free energy of solvation -11.436 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.644 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.425 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.861 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.069 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds