Wall clock time and date at job start Sun Mar 7 2021 03:36:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34234 * 116.99938 * 2 1 4 4 O 1.20822 * 119.99973 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00068 * 179.97438 * 3 2 1 6 6 C 1.53899 * 113.59596 * 279.19659 * 5 3 2 7 7 C 1.53315 * 86.83253 * 220.49086 * 6 5 3 8 8 C 1.53134 * 87.75925 * 25.01052 * 7 6 5 9 9 C 1.53740 * 114.69653 * 268.65759 * 7 6 5 10 10 C 1.55304 * 102.73562 * 251.57672 * 9 7 6 11 11 C 1.54970 * 101.66399 * 325.01831 * 10 9 7 12 12 N 1.46378 * 115.40652 * 142.16167 * 7 6 5 13 13 C 1.34778 * 125.79908 * 311.07947 * 12 7 6 14 14 O 1.21277 * 120.00313 * 359.97438 * 13 12 7 15 15 C 1.50702 * 119.99596 * 180.02562 * 13 12 7 16 16 C 1.53008 * 109.46802 * 180.02562 * 15 13 12 17 17 O 1.42902 * 109.47024 * 180.02562 * 16 15 13 18 18 C 1.35897 * 116.99756 * 180.02562 * 17 16 15 19 19 C 1.38714 * 120.05352 * 179.97438 * 18 17 16 20 20 C 1.38162 * 119.94484 * 179.97438 * 19 18 17 21 21 C 1.50698 * 119.97277 * 180.02562 * 20 19 18 22 22 O 1.42894 * 109.47370 * 65.00286 * 21 20 19 23 23 Si 1.86309 * 109.46933 * 185.00196 * 21 20 19 24 24 C 1.38247 * 120.05468 * 0.02562 * 20 19 18 25 25 C 1.38283 * 120.10971 * 0.02562 * 24 20 19 26 26 C 1.38118 * 120.06066 * 359.68018 * 25 24 20 27 27 H 1.08999 * 109.47008 * 59.99921 * 1 2 3 28 28 H 1.09006 * 109.46832 * 179.97438 * 1 2 3 29 29 H 1.08996 * 109.47465 * 299.99911 * 1 2 3 30 30 H 1.08997 * 112.83549 * 50.33146 * 5 3 2 31 31 H 1.09003 * 113.63917 * 334.95953 * 6 5 3 32 32 H 1.08998 * 113.65031 * 105.96079 * 6 5 3 33 33 H 1.09007 * 113.64846 * 220.48724 * 8 7 6 34 34 H 1.09007 * 113.64655 * 89.49003 * 8 7 6 35 35 H 1.08997 * 110.76125 * 9.88666 * 9 7 6 36 36 H 1.09000 * 110.76188 * 133.07964 * 9 7 6 37 37 H 1.08999 * 110.98801 * 83.11076 * 10 9 7 38 38 H 1.08997 * 110.99200 * 206.91989 * 10 9 7 39 39 H 1.08998 * 110.36439 * 155.52736 * 11 10 9 40 40 H 1.09003 * 110.35896 * 277.72542 * 11 10 9 41 41 H 1.09005 * 109.46860 * 299.99427 * 15 13 12 42 42 H 1.08992 * 109.47654 * 60.00054 * 15 13 12 43 43 H 1.08996 * 109.46552 * 299.99822 * 16 15 13 44 44 H 1.08992 * 109.47079 * 59.99571 * 16 15 13 45 45 H 1.08001 * 120.03039 * 359.97438 * 19 18 17 46 46 H 1.09005 * 109.47062 * 304.99673 * 21 20 19 47 47 H 0.96704 * 114.00360 * 179.97438 * 22 21 20 48 48 H 1.48495 * 109.99881 * 299.99858 * 23 21 20 49 49 H 1.48499 * 110.00051 * 61.32176 * 23 21 20 50 50 H 1.07998 * 119.94445 * 179.97438 * 24 20 19 51 51 H 1.08005 * 119.97295 * 179.97438 * 25 24 20 52 52 H 1.08004 * 120.03727 * 180.32192 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.1927 1.0824 1.3931 7 6 5.1685 2.2030 1.0154 8 6 4.1077 2.7150 0.0369 9 6 6.4736 1.7242 0.3590 10 6 7.5278 1.9722 1.4721 11 6 6.9873 3.2655 2.1330 12 7 5.5184 3.1227 2.0991 13 6 4.6476 3.7347 2.9259 14 8 3.4567 3.5407 2.8036 15 6 5.1536 4.6608 4.0017 16 6 3.9689 5.2183 4.7934 17 8 4.4487 6.0970 5.8131 18 6 3.5178 6.6806 6.6128 19 6 3.9134 7.5444 7.6235 20 6 2.9649 8.1368 8.4349 21 6 3.3940 9.0758 9.5327 22 8 3.9988 10.2359 8.9581 23 14 1.9063 9.5822 10.5334 24 6 1.6227 7.8690 8.2405 25 6 1.2258 7.0075 7.2343 26 6 2.1696 6.4173 6.4166 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8899 30 1 4.0226 0.6566 -0.7724 31 1 3.5237 1.3432 2.2132 32 1 4.6708 0.1120 1.5271 33 1 4.5176 3.0521 -0.9153 34 1 3.4149 3.4315 0.4785 35 1 6.4154 0.6644 0.1113 36 1 6.6989 2.3150 -0.5289 37 1 7.5447 1.1474 2.1845 38 1 8.5166 2.1364 1.0439 39 1 7.3375 3.3403 3.1625 40 1 7.2981 4.1411 1.5629 41 1 5.8129 4.1113 4.6736 42 1 5.7042 5.4827 3.5441 43 1 3.3094 5.7676 4.1217 44 1 3.4187 4.3962 5.2510 45 1 4.9619 7.7536 7.7761 46 1 4.1133 8.5737 10.1798 47 1 4.2995 10.8857 9.6081 48 1 0.9180 10.2679 9.6626 49 1 1.2869 8.3881 11.1625 50 1 0.8828 8.3328 8.8760 51 1 0.1766 6.7995 7.0846 52 1 1.8589 5.7485 5.6275 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15736542_4549614.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:36:02 Heat of formation + Delta-G solvation = -123.597339 kcal Electronic energy + Delta-G solvation = -34509.311689 eV Core-core repulsion = 29828.185580 eV Total energy + Delta-G solvation = -4681.126109 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.181 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -42.47740 -41.28077 -40.98610 -39.51594 -38.83145 -37.51828 -37.27073 -36.63449 -33.48534 -32.59790 -32.52354 -30.77441 -29.69349 -28.12668 -27.03133 -26.97361 -25.97731 -24.91473 -23.63364 -23.48073 -22.28164 -21.64512 -20.73804 -19.53616 -18.88086 -18.55097 -18.39174 -17.91083 -17.75243 -17.49842 -17.30288 -17.20410 -17.01127 -16.80679 -16.18463 -15.85499 -15.73288 -15.53287 -15.26420 -14.66820 -14.63552 -14.48371 -14.45443 -14.32446 -14.25961 -14.04172 -13.92239 -13.69475 -13.49564 -13.41770 -13.24911 -12.95220 -12.85138 -12.79401 -12.44577 -12.31263 -12.21627 -12.07137 -12.03792 -11.99560 -11.79311 -11.68296 -11.67180 -11.65180 -11.17815 -10.78848 -10.34968 -9.84642 -9.76712 -9.19544 -4.95029 0.26207 0.45091 1.27962 1.31394 1.47767 1.53173 1.66993 1.85683 2.00559 2.32142 2.69112 3.15168 3.21957 3.27329 3.41680 3.48259 3.50306 3.55381 3.74802 3.79494 3.85493 3.88520 3.89080 3.94473 4.05348 4.10250 4.17757 4.24634 4.24797 4.24998 4.29339 4.32727 4.39156 4.48736 4.50969 4.54216 4.61231 4.61352 4.64289 4.67126 4.71500 4.72561 4.73861 4.85318 4.91802 4.97207 5.01820 5.03509 5.29642 5.41486 5.45581 5.49378 5.52759 5.71304 6.34401 6.41170 6.63532 6.89125 7.02608 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.360 6.360 3 C 0.471 3.529 4 O -0.497 6.497 5 C -0.105 4.105 6 C -0.122 4.122 7 C 0.143 3.857 8 C -0.122 4.122 9 C -0.111 4.111 10 C -0.132 4.132 11 C 0.094 3.906 12 N -0.604 5.604 13 C 0.536 3.464 14 O -0.527 6.527 15 C -0.136 4.136 16 C 0.074 3.926 17 O -0.315 6.315 18 C 0.135 3.865 19 C -0.122 4.122 20 C -0.038 4.038 21 C -0.073 4.073 22 O -0.544 6.544 23 Si 0.687 3.313 24 C -0.162 4.162 25 C -0.072 4.072 26 C -0.202 4.202 27 H 0.063 0.937 28 H 0.102 0.898 29 H 0.063 0.937 30 H 0.127 0.873 31 H 0.102 0.898 32 H 0.085 0.915 33 H 0.082 0.918 34 H 0.111 0.889 35 H 0.090 0.910 36 H 0.086 0.914 37 H 0.080 0.920 38 H 0.090 0.910 39 H 0.081 0.919 40 H 0.076 0.924 41 H 0.106 0.894 42 H 0.107 0.893 43 H 0.073 0.927 44 H 0.072 0.928 45 H 0.136 0.864 46 H 0.076 0.924 47 H 0.383 0.617 48 H -0.250 1.250 49 H -0.255 1.255 50 H 0.120 0.880 51 H 0.130 0.870 52 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.360 -1.920 1.374 6.784 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.277 6.277 3 C 0.313 3.687 4 O -0.383 6.383 5 C -0.124 4.124 6 C -0.161 4.161 7 C 0.057 3.943 8 C -0.160 4.160 9 C -0.149 4.149 10 C -0.170 4.170 11 C -0.028 4.028 12 N -0.337 5.337 13 C 0.325 3.675 14 O -0.403 6.403 15 C -0.176 4.176 16 C -0.001 4.001 17 O -0.229 6.229 18 C 0.089 3.911 19 C -0.141 4.141 20 C -0.038 4.038 21 C -0.183 4.183 22 O -0.350 6.350 23 Si 0.588 3.412 24 C -0.179 4.179 25 C -0.090 4.090 26 C -0.220 4.220 27 H 0.082 0.918 28 H 0.121 0.879 29 H 0.082 0.918 30 H 0.145 0.855 31 H 0.120 0.880 32 H 0.104 0.896 33 H 0.100 0.900 34 H 0.129 0.871 35 H 0.108 0.892 36 H 0.105 0.895 37 H 0.098 0.902 38 H 0.108 0.892 39 H 0.100 0.900 40 H 0.094 0.906 41 H 0.124 0.876 42 H 0.125 0.875 43 H 0.091 0.909 44 H 0.091 0.909 45 H 0.153 0.847 46 H 0.094 0.906 47 H 0.230 0.770 48 H -0.175 1.175 49 H -0.180 1.180 50 H 0.137 0.863 51 H 0.148 0.852 52 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 4.631 -2.056 0.936 5.153 hybrid contribution -0.180 -0.490 -0.552 0.760 sum 4.451 -2.546 0.384 5.142 Atomic orbital electron populations 1.23292 0.76140 1.03825 1.02670 1.86501 1.23586 1.33469 1.84108 1.23422 0.91563 0.81398 0.72329 1.90692 1.66827 1.36387 1.44404 1.22318 0.87817 1.00972 1.01313 1.23309 0.97936 0.99094 0.95733 1.21927 0.94473 0.90221 0.87662 1.23350 0.97582 0.95270 0.99783 1.22458 0.91613 1.02698 0.98135 1.22816 0.99049 0.97237 0.97926 1.22490 0.79300 0.98946 1.02080 1.48270 1.07281 1.45687 1.32437 1.19968 0.85671 0.80318 0.81586 1.90773 1.15340 1.62946 1.71276 1.21452 0.99476 0.99891 0.96789 1.22424 0.95940 0.92974 0.88794 1.85965 1.33987 1.58978 1.43946 1.18921 0.87779 0.93274 0.91084 1.20213 1.00616 0.98029 0.95206 1.19103 0.92676 0.96130 0.95898 1.24720 1.07196 0.88349 0.98049 1.86505 1.81037 1.30444 1.37062 0.95420 0.77211 0.85050 0.83525 1.20806 0.94806 1.01901 1.00407 1.20876 0.99629 0.94877 0.93594 1.21381 0.92131 1.05132 1.03385 0.91832 0.87940 0.91839 0.85538 0.87975 0.89612 0.89987 0.87050 0.89175 0.89530 0.90153 0.89171 0.90032 0.90611 0.87560 0.87497 0.90855 0.90931 0.84656 0.90598 0.76979 1.17513 1.17961 0.86287 0.85189 0.84811 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.04 10.56 101.05 1.07 1.11 16 2 O -0.36 -1.15 10.57 -39.27 -0.41 -1.56 16 3 C 0.47 1.93 7.48 36.01 0.27 2.20 16 4 O -0.50 -3.70 15.65 -18.75 -0.29 -4.00 16 5 C -0.10 -0.08 4.06 -90.84 -0.37 -0.45 16 6 C -0.12 -0.05 6.68 -26.10 -0.17 -0.23 16 7 C 0.14 -0.09 1.34 -131.27 -0.18 -0.27 16 8 C -0.12 -0.15 6.54 -26.20 -0.17 -0.32 16 9 C -0.11 0.39 6.08 -25.12 -0.15 0.24 16 10 C -0.13 0.57 7.09 -24.47 -0.17 0.39 16 11 C 0.09 -0.32 6.71 -2.39 -0.02 -0.34 16 12 N -0.60 0.25 3.17 -156.15 -0.49 -0.25 16 13 C 0.54 0.87 7.51 -10.98 -0.08 0.79 16 14 O -0.53 -2.78 13.17 5.56 0.07 -2.71 16 15 C -0.14 0.06 5.09 -27.88 -0.14 -0.08 16 16 C 0.07 0.12 4.03 37.16 0.15 0.27 16 17 O -0.31 -1.01 10.14 -19.42 -0.20 -1.21 16 18 C 0.13 0.54 6.69 -39.21 -0.26 0.28 16 19 C -0.12 -0.48 9.62 -39.43 -0.38 -0.86 16 20 C -0.04 -0.14 5.38 -104.65 -0.56 -0.70 16 21 C -0.07 -0.06 2.79 36.00 0.10 0.04 16 22 O -0.54 -0.56 12.81 -35.23 -0.45 -1.01 16 23 Si 0.69 -0.24 29.85 -169.99 -5.07 -5.31 16 24 C -0.16 -0.61 8.67 -39.56 -0.34 -0.95 16 25 C -0.07 -0.23 10.04 -39.61 -0.40 -0.63 16 26 C -0.20 -0.70 9.04 -39.43 -0.36 -1.05 16 27 H 0.06 0.07 8.13 -51.93 -0.42 -0.35 16 28 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 29 H 0.06 0.10 8.13 -51.93 -0.42 -0.32 16 30 H 0.13 -0.25 8.14 -51.93 -0.42 -0.67 16 31 H 0.10 0.34 6.50 -51.93 -0.34 0.01 16 32 H 0.09 -0.12 8.01 -51.93 -0.42 -0.53 16 33 H 0.08 -0.03 8.01 -51.93 -0.42 -0.44 16 34 H 0.11 0.54 6.03 -51.92 -0.31 0.23 16 35 H 0.09 -0.40 7.85 -51.93 -0.41 -0.81 16 36 H 0.09 -0.35 8.01 -51.93 -0.42 -0.77 16 37 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 38 H 0.09 -0.49 8.14 -51.93 -0.42 -0.91 16 39 H 0.08 -0.36 7.50 -51.93 -0.39 -0.75 16 40 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 41 H 0.11 -0.21 7.86 -51.93 -0.41 -0.62 16 42 H 0.11 -0.18 8.14 -51.93 -0.42 -0.60 16 43 H 0.07 0.17 7.61 -51.93 -0.40 -0.22 16 44 H 0.07 0.14 7.63 -51.93 -0.40 -0.26 16 45 H 0.14 0.41 8.06 -52.49 -0.42 -0.02 16 46 H 0.08 -0.07 7.96 -51.93 -0.41 -0.48 16 47 H 0.38 -1.63 8.74 45.56 0.40 -1.23 16 48 H -0.25 -0.72 7.05 56.52 0.40 -0.32 16 49 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 50 H 0.12 0.36 4.86 -52.49 -0.26 0.10 16 51 H 0.13 0.14 8.06 -52.48 -0.42 -0.28 16 52 H 0.13 0.31 6.30 -52.48 -0.33 -0.02 16 LS Contribution 419.01 15.07 6.31 6.31 Total: 0.00 -11.13 419.01 -10.63 -21.76 By element: Atomic # 1 Polarization: -3.55 SS G_CDS: -7.92 Total: -11.47 kcal Atomic # 6 Polarization: 1.62 SS G_CDS: -2.17 Total: -0.55 kcal Atomic # 7 Polarization: 0.25 SS G_CDS: -0.49 Total: -0.25 kcal Atomic # 8 Polarization: -9.21 SS G_CDS: -1.28 Total: -10.49 kcal Atomic # 14 Polarization: -0.24 SS G_CDS: -5.07 Total: -5.31 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -11.13 -10.63 -21.76 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_4549614.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.837 kcal (2) G-P(sol) polarization free energy of solvation -11.126 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -112.963 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.634 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.760 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.597 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds