Wall clock time and date at job start Sun Mar 7 2021 03:36:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34234 * 116.99938 * 2 1 4 4 O 1.20822 * 119.99973 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00068 * 179.97438 * 3 2 1 6 6 C 1.53899 * 113.59596 * 279.19659 * 5 3 2 7 7 C 1.53315 * 86.83253 * 220.49086 * 6 5 3 8 8 C 1.53134 * 87.75925 * 25.01052 * 7 6 5 9 9 C 1.53740 * 114.69653 * 268.65759 * 7 6 5 10 10 C 1.55304 * 102.73562 * 251.57672 * 9 7 6 11 11 C 1.54970 * 101.66399 * 325.01831 * 10 9 7 12 12 N 1.46378 * 115.40652 * 142.16167 * 7 6 5 13 13 C 1.34778 * 125.79908 * 311.07947 * 12 7 6 14 14 O 1.21277 * 120.00313 * 359.97438 * 13 12 7 15 15 C 1.50702 * 119.99596 * 180.02562 * 13 12 7 16 16 C 1.53008 * 109.46802 * 180.02562 * 15 13 12 17 17 O 1.42902 * 109.47024 * 180.02562 * 16 15 13 18 18 C 1.35897 * 116.99756 * 180.02562 * 17 16 15 19 19 C 1.38714 * 120.05352 * 179.97438 * 18 17 16 20 20 C 1.38162 * 119.94484 * 179.97438 * 19 18 17 21 21 C 1.50698 * 119.97277 * 180.02562 * 20 19 18 22 22 O 1.42894 * 109.47370 * 65.00286 * 21 20 19 23 23 Si 1.86309 * 109.46933 * 185.00196 * 21 20 19 24 24 C 1.38247 * 120.05468 * 0.02562 * 20 19 18 25 25 C 1.38283 * 120.10971 * 0.02562 * 24 20 19 26 26 C 1.38118 * 120.06066 * 359.68018 * 25 24 20 27 27 H 1.08999 * 109.47008 * 59.99921 * 1 2 3 28 28 H 1.09006 * 109.46832 * 179.97438 * 1 2 3 29 29 H 1.08996 * 109.47465 * 299.99911 * 1 2 3 30 30 H 1.08997 * 112.83549 * 50.33146 * 5 3 2 31 31 H 1.09003 * 113.63917 * 334.95953 * 6 5 3 32 32 H 1.08998 * 113.65031 * 105.96079 * 6 5 3 33 33 H 1.09007 * 113.64846 * 220.48724 * 8 7 6 34 34 H 1.09007 * 113.64655 * 89.49003 * 8 7 6 35 35 H 1.08997 * 110.76125 * 9.88666 * 9 7 6 36 36 H 1.09000 * 110.76188 * 133.07964 * 9 7 6 37 37 H 1.08999 * 110.98801 * 83.11076 * 10 9 7 38 38 H 1.08997 * 110.99200 * 206.91989 * 10 9 7 39 39 H 1.08998 * 110.36439 * 155.52736 * 11 10 9 40 40 H 1.09003 * 110.35896 * 277.72542 * 11 10 9 41 41 H 1.09005 * 109.46860 * 299.99427 * 15 13 12 42 42 H 1.08992 * 109.47654 * 60.00054 * 15 13 12 43 43 H 1.08996 * 109.46552 * 299.99822 * 16 15 13 44 44 H 1.08992 * 109.47079 * 59.99571 * 16 15 13 45 45 H 1.08001 * 120.03039 * 359.97438 * 19 18 17 46 46 H 1.09005 * 109.47062 * 304.99673 * 21 20 19 47 47 H 0.96704 * 114.00360 * 179.97438 * 22 21 20 48 48 H 1.48495 * 109.99881 * 299.99858 * 23 21 20 49 49 H 1.48499 * 110.00051 * 61.32176 * 23 21 20 50 50 H 1.07998 * 119.94445 * 179.97438 * 24 20 19 51 51 H 1.08005 * 119.97295 * 179.97438 * 25 24 20 52 52 H 1.08004 * 120.03727 * 180.32192 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.1927 1.0824 1.3931 7 6 5.1685 2.2030 1.0154 8 6 4.1077 2.7150 0.0369 9 6 6.4736 1.7242 0.3590 10 6 7.5278 1.9722 1.4721 11 6 6.9873 3.2655 2.1330 12 7 5.5184 3.1227 2.0991 13 6 4.6476 3.7347 2.9259 14 8 3.4567 3.5407 2.8036 15 6 5.1536 4.6608 4.0017 16 6 3.9689 5.2183 4.7934 17 8 4.4487 6.0970 5.8131 18 6 3.5178 6.6806 6.6128 19 6 3.9134 7.5444 7.6235 20 6 2.9649 8.1368 8.4349 21 6 3.3940 9.0758 9.5327 22 8 3.9988 10.2359 8.9581 23 14 1.9063 9.5822 10.5334 24 6 1.6227 7.8690 8.2405 25 6 1.2258 7.0075 7.2343 26 6 2.1696 6.4173 6.4166 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8899 30 1 4.0226 0.6566 -0.7724 31 1 3.5237 1.3432 2.2132 32 1 4.6708 0.1120 1.5271 33 1 4.5176 3.0521 -0.9153 34 1 3.4149 3.4315 0.4785 35 1 6.4154 0.6644 0.1113 36 1 6.6989 2.3150 -0.5289 37 1 7.5447 1.1474 2.1845 38 1 8.5166 2.1364 1.0439 39 1 7.3375 3.3403 3.1625 40 1 7.2981 4.1411 1.5629 41 1 5.8129 4.1113 4.6736 42 1 5.7042 5.4827 3.5441 43 1 3.3094 5.7676 4.1217 44 1 3.4187 4.3962 5.2510 45 1 4.9619 7.7536 7.7761 46 1 4.1133 8.5737 10.1798 47 1 4.2995 10.8857 9.6081 48 1 0.9180 10.2679 9.6626 49 1 1.2869 8.3881 11.1625 50 1 0.8828 8.3328 8.8760 51 1 0.1766 6.7995 7.0846 52 1 1.8589 5.7485 5.6275 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15736542_4549614.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:36:00 Heat of formation + Delta-G solvation = -123.367335 kcal Electronic energy + Delta-G solvation = -34509.301715 eV Core-core repulsion = 29828.185580 eV Total energy + Delta-G solvation = -4681.116135 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.181 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -42.52909 -41.51435 -41.20456 -39.64061 -38.99756 -37.73267 -37.35391 -36.70193 -33.56426 -32.75104 -32.49699 -30.96864 -29.76531 -28.09481 -27.16465 -27.03022 -26.00504 -24.99902 -23.87875 -23.35922 -22.31363 -21.81601 -20.81398 -19.61401 -19.05169 -18.74174 -18.42039 -18.07055 -17.82771 -17.64482 -17.51847 -17.41276 -17.14804 -16.81969 -16.27726 -15.94134 -15.82785 -15.54114 -15.33424 -14.78635 -14.68900 -14.65807 -14.47655 -14.40226 -14.22700 -14.15453 -14.05112 -13.71140 -13.56698 -13.45039 -13.38357 -13.06479 -12.98346 -12.90183 -12.40266 -12.36317 -12.23569 -12.09286 -11.99410 -11.96902 -11.93792 -11.92405 -11.84589 -11.49114 -11.39738 -10.91317 -10.41261 -10.05642 -9.75102 -9.47126 -4.95691 0.00718 0.17109 1.01598 1.25606 1.40126 1.47170 1.64003 1.69516 1.96745 2.24442 2.44671 3.16807 3.27426 3.34252 3.34938 3.48552 3.51921 3.62032 3.68855 3.75056 3.76022 3.79251 3.87948 3.90337 4.08219 4.08838 4.10696 4.17322 4.18256 4.18957 4.23905 4.33934 4.40036 4.49117 4.52602 4.54153 4.58587 4.62062 4.64334 4.74246 4.77530 4.79114 4.85310 4.92569 4.96573 5.04052 5.07719 5.15395 5.17422 5.23259 5.25760 5.33916 5.48037 5.48666 6.15388 6.38028 6.59950 6.89677 6.97643 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.362 6.362 3 C 0.465 3.535 4 O -0.541 6.541 5 C -0.100 4.100 6 C -0.121 4.121 7 C 0.146 3.854 8 C -0.128 4.128 9 C -0.106 4.106 10 C -0.126 4.126 11 C 0.086 3.914 12 N -0.603 5.603 13 C 0.529 3.471 14 O -0.574 6.574 15 C -0.126 4.126 16 C 0.076 3.924 17 O -0.316 6.316 18 C 0.124 3.876 19 C -0.133 4.133 20 C -0.051 4.051 21 C -0.082 4.082 22 O -0.563 6.563 23 Si 0.784 3.216 24 C -0.179 4.179 25 C -0.078 4.078 26 C -0.212 4.212 27 H 0.061 0.939 28 H 0.134 0.866 29 H 0.052 0.948 30 H 0.163 0.837 31 H 0.065 0.935 32 H 0.109 0.891 33 H 0.097 0.903 34 H 0.068 0.932 35 H 0.107 0.893 36 H 0.097 0.903 37 H 0.081 0.919 38 H 0.109 0.891 39 H 0.095 0.905 40 H 0.086 0.914 41 H 0.127 0.873 42 H 0.123 0.877 43 H 0.060 0.940 44 H 0.064 0.936 45 H 0.143 0.857 46 H 0.099 0.901 47 H 0.405 0.595 48 H -0.297 1.297 49 H -0.289 1.289 50 H 0.122 0.878 51 H 0.147 0.853 52 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.161 -2.720 1.281 9.642 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.278 6.278 3 C 0.310 3.690 4 O -0.431 6.431 5 C -0.119 4.119 6 C -0.160 4.160 7 C 0.060 3.940 8 C -0.166 4.166 9 C -0.144 4.144 10 C -0.164 4.164 11 C -0.035 4.035 12 N -0.334 5.334 13 C 0.318 3.682 14 O -0.454 6.454 15 C -0.165 4.165 16 C 0.000 4.000 17 O -0.230 6.230 18 C 0.078 3.922 19 C -0.152 4.152 20 C -0.051 4.051 21 C -0.191 4.191 22 O -0.373 6.373 23 Si 0.690 3.310 24 C -0.197 4.197 25 C -0.095 4.095 26 C -0.231 4.231 27 H 0.080 0.920 28 H 0.152 0.848 29 H 0.071 0.929 30 H 0.180 0.820 31 H 0.084 0.916 32 H 0.127 0.873 33 H 0.116 0.884 34 H 0.086 0.914 35 H 0.125 0.875 36 H 0.115 0.885 37 H 0.100 0.900 38 H 0.127 0.873 39 H 0.113 0.887 40 H 0.104 0.896 41 H 0.145 0.855 42 H 0.141 0.859 43 H 0.078 0.922 44 H 0.083 0.917 45 H 0.161 0.839 46 H 0.116 0.884 47 H 0.257 0.743 48 H -0.226 1.226 49 H -0.216 1.216 50 H 0.140 0.860 51 H 0.165 0.835 52 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 7.511 -2.862 0.850 8.082 hybrid contribution -1.126 -0.249 -0.553 1.279 sum 6.385 -3.110 0.298 7.108 Atomic orbital electron populations 1.23507 0.75281 1.05685 1.02098 1.86504 1.24606 1.33021 1.83683 1.24206 0.92975 0.80951 0.70892 1.90670 1.68048 1.37770 1.46588 1.22556 0.85497 1.01280 1.02581 1.23241 0.97777 1.00720 0.94230 1.22069 0.95443 0.89335 0.87130 1.23284 0.97768 0.94750 1.00845 1.22529 0.89610 1.03775 0.98441 1.22839 0.99537 0.96482 0.97515 1.22785 0.77132 1.00154 1.03447 1.48392 1.08577 1.44819 1.31657 1.20325 0.85304 0.80450 0.82087 1.90764 1.17436 1.64606 1.72634 1.21408 0.98665 1.00118 0.96335 1.22417 0.96902 0.92302 0.88352 1.85951 1.33940 1.59092 1.44051 1.19134 0.88124 0.93525 0.91400 1.20396 1.01149 0.98240 0.95405 1.19537 0.92592 0.96436 0.96535 1.24903 1.08647 0.88318 0.97245 1.86450 1.81174 1.31000 1.38709 0.94429 0.74332 0.81601 0.80637 1.21008 0.95283 1.02441 1.00942 1.21141 1.00559 0.94540 0.93309 1.21503 0.92285 1.05522 1.03743 0.91990 0.84829 0.92922 0.81954 0.91588 0.87251 0.88420 0.91362 0.87510 0.88463 0.90047 0.87272 0.88653 0.89607 0.85458 0.85881 0.92217 0.91732 0.83895 0.88360 0.74348 1.22559 1.21607 0.86043 0.83540 0.84475 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.10 10.56 113.37 1.20 1.29 16 2 O -0.36 -2.71 10.57 -51.46 -0.54 -3.26 16 3 C 0.47 4.74 7.48 71.24 0.53 5.28 16 4 O -0.54 -9.93 15.65 21.98 0.34 -9.59 16 5 C -0.10 -0.20 4.06 -10.94 -0.04 -0.24 16 6 C -0.12 -0.17 6.68 31.00 0.21 0.04 16 7 C 0.15 -0.23 1.34 4.02 0.01 -0.22 16 8 C -0.13 -0.46 6.54 30.94 0.20 -0.26 16 9 C -0.11 1.01 6.08 31.63 0.19 1.20 16 10 C -0.13 1.42 7.09 32.06 0.23 1.65 16 11 C 0.09 -0.73 6.71 86.84 0.58 -0.15 16 12 N -0.60 0.45 3.17 -766.33 -2.43 -1.97 16 13 C 0.53 2.54 7.51 87.66 0.66 3.20 16 14 O -0.57 -8.06 13.17 -3.02 -0.04 -8.10 16 15 C -0.13 0.04 5.09 29.85 0.15 0.19 16 16 C 0.08 0.40 4.03 71.98 0.29 0.69 16 17 O -0.32 -2.42 10.14 -92.39 -0.94 -3.36 16 18 C 0.12 1.19 6.69 22.51 0.15 1.34 16 19 C -0.13 -1.18 9.62 22.37 0.22 -0.97 16 20 C -0.05 -0.41 5.38 -19.88 -0.11 -0.52 16 21 C -0.08 -0.12 2.79 71.24 0.20 0.08 16 22 O -0.56 -0.84 12.81 -148.98 -1.91 -2.75 16 23 Si 0.78 -0.44 29.85 68.60 2.05 1.61 16 24 C -0.18 -1.60 8.67 22.28 0.19 -1.41 16 25 C -0.08 -0.63 10.04 22.25 0.22 -0.41 16 26 C -0.21 -1.91 9.04 22.36 0.20 -1.71 16 27 H 0.06 0.23 8.13 -2.39 -0.02 0.22 16 28 H 0.13 -0.44 8.14 -2.38 -0.02 -0.46 16 29 H 0.05 0.30 8.13 -2.39 -0.02 0.28 16 30 H 0.16 -0.91 8.14 -2.39 -0.02 -0.93 16 31 H 0.07 0.62 6.50 -2.39 -0.02 0.61 16 32 H 0.11 -0.42 8.01 -2.39 -0.02 -0.44 16 33 H 0.10 -0.05 8.01 -2.38 -0.02 -0.07 16 34 H 0.07 0.90 6.03 -2.38 -0.01 0.89 16 35 H 0.11 -1.31 7.85 -2.39 -0.02 -1.33 16 36 H 0.10 -1.07 8.01 -2.39 -0.02 -1.09 16 37 H 0.08 -0.89 8.14 -2.39 -0.02 -0.91 16 38 H 0.11 -1.57 8.14 -2.39 -0.02 -1.59 16 39 H 0.10 -1.05 7.50 -2.39 -0.02 -1.07 16 40 H 0.09 -0.86 8.14 -2.39 -0.02 -0.88 16 41 H 0.13 -0.59 7.86 -2.38 -0.02 -0.61 16 42 H 0.12 -0.44 8.14 -2.39 -0.02 -0.46 16 43 H 0.06 0.47 7.61 -2.39 -0.02 0.45 16 44 H 0.06 0.43 7.63 -2.39 -0.02 0.41 16 45 H 0.14 0.92 8.06 -2.91 -0.02 0.90 16 46 H 0.10 -0.30 7.96 -2.38 -0.02 -0.32 16 47 H 0.41 -3.94 8.74 -74.05 -0.65 -4.59 16 48 H -0.30 -2.12 7.05 99.48 0.70 -1.42 16 49 H -0.29 -1.41 7.11 99.48 0.71 -0.71 16 50 H 0.12 0.91 4.86 -2.91 -0.01 0.90 16 51 H 0.15 0.53 8.06 -2.91 -0.02 0.50 16 52 H 0.14 1.03 6.30 -2.91 -0.02 1.01 16 Total: 0.00 -31.19 419.01 2.14 -29.05 By element: Atomic # 1 Polarization: -11.04 SS G_CDS: 0.33 Total: -10.71 kcal Atomic # 6 Polarization: 3.81 SS G_CDS: 5.28 Total: 9.09 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -2.43 Total: -1.97 kcal Atomic # 8 Polarization: -23.97 SS G_CDS: -3.08 Total: -27.06 kcal Atomic # 14 Polarization: -0.44 SS G_CDS: 2.05 Total: 1.61 kcal Total: -31.19 2.14 -29.05 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_4549614.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.321 kcal (2) G-P(sol) polarization free energy of solvation -31.188 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.509 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.142 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.046 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.367 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds