Wall clock time and date at job start Sun Mar 7 2021 03:37:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34230 * 116.99836 * 2 1 4 4 O 1.20833 * 119.99930 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00262 * 180.27336 * 3 2 1 6 6 C 1.53899 * 113.59333 * 278.91454 * 5 3 2 7 7 C 1.53325 * 86.83067 * 220.48509 * 6 5 3 8 8 C 1.53139 * 87.75596 * 25.01372 * 7 6 5 9 9 C 1.53736 * 114.69906 * 268.65665 * 7 6 5 10 10 C 1.55299 * 102.73524 * 251.57767 * 9 7 6 11 11 C 1.54965 * 101.66707 * 325.02105 * 10 9 7 12 12 N 1.46381 * 115.39880 * 142.16298 * 7 6 5 13 13 C 1.34770 * 125.80242 * 311.07903 * 12 7 6 14 14 O 1.21279 * 120.00152 * 0.02562 * 13 12 7 15 15 C 1.50699 * 120.00050 * 179.97438 * 13 12 7 16 16 N 1.46504 * 109.47368 * 180.02562 * 15 13 12 17 17 C 1.36835 * 125.06069 * 265.03130 * 16 15 13 18 18 C 1.34233 * 109.93678 * 179.97438 * 17 16 15 19 19 C 1.50701 * 126.50154 * 180.02562 * 18 17 16 20 20 O 1.42900 * 109.47300 * 254.97109 * 19 18 17 21 21 Si 1.86303 * 109.47175 * 14.97148 * 19 18 17 22 22 C 1.46491 * 107.00172 * 359.97438 * 18 17 16 23 23 C 1.39593 * 134.04111 * 180.02562 * 22 18 17 24 24 C 1.36660 * 119.76301 * 179.97438 * 23 22 18 25 25 C 1.38791 * 120.53280 * 0.02562 * 24 23 22 26 26 C 1.37787 * 120.66301 * 359.97438 * 25 24 23 27 27 C 1.37694 * 125.06328 * 84.71985 * 16 15 13 28 28 H 1.08998 * 109.47630 * 300.00638 * 1 2 3 29 29 H 1.09004 * 109.46770 * 60.01042 * 1 2 3 30 30 H 1.09001 * 109.46882 * 180.02562 * 1 2 3 31 31 H 1.09002 * 112.83665 * 50.04840 * 5 3 2 32 32 H 1.08991 * 113.64527 * 334.96001 * 6 5 3 33 33 H 1.09006 * 113.64021 * 105.96409 * 6 5 3 34 34 H 1.08998 * 113.64081 * 220.47700 * 8 7 6 35 35 H 1.09005 * 113.64286 * 89.49109 * 8 7 6 36 36 H 1.09001 * 110.75870 * 9.89107 * 9 7 6 37 37 H 1.09001 * 110.75752 * 133.08348 * 9 7 6 38 38 H 1.09005 * 110.98767 * 83.11613 * 10 9 7 39 39 H 1.09002 * 110.99135 * 206.92131 * 10 9 7 40 40 H 1.08999 * 110.36199 * 155.52859 * 11 10 9 41 41 H 1.09001 * 110.35700 * 277.72562 * 11 10 9 42 42 H 1.08996 * 109.47513 * 300.00257 * 15 13 12 43 43 H 1.09001 * 109.46894 * 60.00268 * 15 13 12 44 44 H 1.08003 * 125.03503 * 359.95297 * 17 16 15 45 45 H 1.08999 * 109.47299 * 134.97065 * 19 18 17 46 46 H 0.96693 * 114.00332 * 180.02562 * 20 19 18 47 47 H 1.48498 * 109.99977 * 178.68046 * 21 19 18 48 48 H 1.48500 * 109.99714 * 300.00000 * 21 19 18 49 49 H 1.07995 * 120.11716 * 359.97438 * 23 22 18 50 50 H 1.08002 * 119.73940 * 180.02562 * 24 23 22 51 51 H 1.07996 * 119.66979 * 179.97438 * 25 24 23 52 52 H 1.08000 * 120.11498 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2750 -0.0062 6 6 4.1988 1.0860 1.3840 7 6 5.1729 2.2057 0.9992 8 6 4.1078 2.7152 0.0240 9 6 6.4752 1.7252 0.3383 10 6 7.5341 1.9761 1.4461 11 6 6.9965 3.2710 2.1061 12 7 5.5276 3.1281 2.0791 13 6 4.6604 3.7421 2.9081 14 8 3.4690 3.5472 2.7920 15 6 5.1711 4.6700 3.9800 16 7 4.0401 5.2059 4.7416 17 6 3.4237 6.4027 4.4963 18 6 2.4260 6.5921 5.3741 19 6 1.5055 7.7834 5.4415 20 8 1.8759 8.6096 6.5471 21 14 1.6400 8.7624 3.8622 22 6 2.4008 5.4206 6.2532 23 6 1.6091 5.0378 7.3374 24 6 1.8463 3.8464 7.9633 25 6 2.8686 3.0136 7.5302 26 6 3.6620 3.3718 6.4622 27 6 3.4352 4.5775 5.8070 28 1 -0.3634 0.5139 0.8899 29 1 -0.3633 0.5137 -0.8901 30 1 -0.3633 -1.0277 0.0005 31 1 4.0192 0.6546 -0.7796 32 1 3.5335 1.3488 2.2063 33 1 4.6774 0.1159 1.5182 34 1 4.5135 3.0499 -0.9307 35 1 3.4170 3.4328 0.4668 36 1 6.4158 0.6647 0.0936 37 1 6.6965 2.3138 -0.5521 38 1 7.5542 1.1531 2.1606 39 1 8.5211 2.1392 1.0132 40 1 7.3513 3.3484 3.1338 41 1 7.3048 4.1451 1.5324 42 1 5.8328 4.1216 4.6504 43 1 5.7203 5.4908 3.5186 44 1 3.6994 7.0929 3.7127 45 1 0.4785 7.4422 5.5711 46 1 1.3244 9.3969 6.6519 47 1 0.7136 9.9223 3.9031 48 1 3.0357 9.2335 3.6740 49 1 0.8121 5.6809 7.6802 50 1 1.2333 3.5504 8.8018 51 1 3.0440 2.0753 8.0354 52 1 4.4548 2.7168 6.1324 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15736542_9818708.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:37:40 Heat of formation + Delta-G solvation = -36.418207 kcal Electronic energy + Delta-G solvation = -37167.843521 eV Core-core repulsion = 32487.301783 eV Total energy + Delta-G solvation = -4680.541738 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.177 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -42.63906 -42.17717 -40.97145 -39.27156 -37.92184 -37.55443 -37.47133 -36.64532 -34.09546 -32.90587 -31.26222 -30.11866 -29.78144 -28.86360 -28.10583 -26.97864 -25.92819 -25.16737 -23.81445 -23.44715 -22.68715 -21.95137 -20.87496 -20.36017 -19.52869 -18.63393 -18.32509 -18.06339 -17.98841 -17.78717 -17.54431 -17.23562 -16.96866 -16.41271 -16.26269 -16.00194 -15.67886 -15.48861 -15.18397 -14.88140 -14.70848 -14.58194 -14.51098 -14.46805 -14.35458 -14.06606 -13.96303 -13.80014 -13.57611 -13.49703 -13.38537 -13.09810 -12.86654 -12.62131 -12.52513 -12.39481 -12.33680 -12.29827 -12.09125 -12.00398 -11.93062 -11.68392 -11.63046 -11.55692 -11.15904 -10.86417 -10.34820 -10.22681 -9.80068 -8.96077 -8.47089 -4.83336 0.33446 0.84034 1.32429 1.39200 1.40604 1.43016 1.65650 1.71426 1.82079 2.02055 2.06595 3.03251 3.17127 3.18315 3.25083 3.44201 3.46408 3.53245 3.54873 3.70355 3.75541 3.78405 3.86076 3.89997 3.92356 4.10874 4.12702 4.15355 4.27948 4.28013 4.36053 4.36262 4.40514 4.48095 4.51153 4.52137 4.61246 4.69015 4.69519 4.71841 4.74774 4.83491 4.85069 4.89338 4.93009 4.96629 5.00856 5.04940 5.30492 5.44531 5.55176 5.69557 5.85627 5.91165 5.95151 6.22571 6.34711 6.41782 6.64938 6.91887 6.99203 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.360 6.360 3 C 0.470 3.530 4 O -0.495 6.495 5 C -0.104 4.104 6 C -0.122 4.122 7 C 0.144 3.856 8 C -0.121 4.121 9 C -0.111 4.111 10 C -0.132 4.132 11 C 0.092 3.908 12 N -0.604 5.604 13 C 0.507 3.493 14 O -0.500 6.500 15 C 0.097 3.903 16 N -0.466 5.466 17 C 0.072 3.928 18 C -0.150 4.150 19 C -0.037 4.037 20 O -0.537 6.537 21 Si 0.677 3.323 22 C -0.085 4.085 23 C -0.065 4.065 24 C -0.146 4.146 25 C -0.097 4.097 26 C -0.127 4.127 27 C 0.110 3.890 28 H 0.063 0.937 29 H 0.063 0.937 30 H 0.102 0.898 31 H 0.126 0.874 32 H 0.102 0.898 33 H 0.085 0.915 34 H 0.081 0.919 35 H 0.112 0.888 36 H 0.090 0.910 37 H 0.086 0.914 38 H 0.080 0.920 39 H 0.090 0.910 40 H 0.079 0.921 41 H 0.076 0.924 42 H 0.116 0.884 43 H 0.121 0.879 44 H 0.168 0.832 45 H 0.072 0.928 46 H 0.375 0.625 47 H -0.259 1.259 48 H -0.255 1.255 49 H 0.121 0.879 50 H 0.122 0.878 51 H 0.124 0.876 52 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.923 -3.143 -3.191 7.426 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.277 6.277 3 C 0.312 3.688 4 O -0.381 6.381 5 C -0.124 4.124 6 C -0.161 4.161 7 C 0.058 3.942 8 C -0.159 4.159 9 C -0.149 4.149 10 C -0.170 4.170 11 C -0.030 4.030 12 N -0.339 5.339 13 C 0.293 3.707 14 O -0.374 6.374 15 C -0.029 4.029 16 N -0.149 5.149 17 C -0.052 4.052 18 C -0.157 4.157 19 C -0.147 4.147 20 O -0.344 6.344 21 Si 0.578 3.422 22 C -0.089 4.089 23 C -0.083 4.083 24 C -0.165 4.165 25 C -0.116 4.116 26 C -0.147 4.147 27 C 0.006 3.994 28 H 0.082 0.918 29 H 0.082 0.918 30 H 0.120 0.880 31 H 0.144 0.856 32 H 0.120 0.880 33 H 0.103 0.897 34 H 0.100 0.900 35 H 0.130 0.870 36 H 0.108 0.892 37 H 0.105 0.895 38 H 0.099 0.901 39 H 0.108 0.892 40 H 0.097 0.903 41 H 0.095 0.905 42 H 0.134 0.866 43 H 0.139 0.861 44 H 0.185 0.815 45 H 0.090 0.910 46 H 0.222 0.778 47 H -0.184 1.184 48 H -0.179 1.179 49 H 0.139 0.861 50 H 0.140 0.860 51 H 0.142 0.858 52 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 5.879 -2.666 -3.656 7.418 hybrid contribution -0.380 0.620 0.848 1.117 sum 5.499 -2.045 -2.807 6.504 Atomic orbital electron populations 1.23293 0.76105 1.03802 1.02708 1.86496 1.23614 1.33466 1.84116 1.23396 0.91532 0.81434 0.72412 1.90699 1.66791 1.36344 1.44300 1.22306 0.87899 1.00922 1.01260 1.23304 0.97889 0.99037 0.95837 1.21930 0.94428 0.90151 0.87649 1.23341 0.97498 0.95324 0.99752 1.22455 0.91594 1.02736 0.98094 1.22806 0.99050 0.97097 0.98002 1.22507 0.79439 0.99186 1.01887 1.48328 1.07127 1.45712 1.32735 1.20678 0.86445 0.81326 0.82245 1.90832 1.14879 1.61600 1.70044 1.21567 0.88377 0.99065 0.93918 1.43205 1.28511 1.16681 1.26518 1.21495 0.94642 0.88210 1.00892 1.19406 1.00824 0.95768 0.99710 1.23998 0.98453 0.93286 0.98955 1.86638 1.60403 1.38663 1.48659 0.95015 0.81141 0.82606 0.83393 1.18936 0.97526 0.94508 0.97966 1.20264 0.98162 0.96087 0.93819 1.20648 0.99449 0.95036 1.01372 1.20802 0.95286 0.99520 0.96038 1.19935 1.02340 0.94489 0.97987 1.18139 0.95357 0.95369 0.90526 0.91778 0.91826 0.87987 0.85602 0.87976 0.89681 0.90012 0.87004 0.89158 0.89518 0.90135 0.89161 0.90268 0.90540 0.86587 0.86143 0.81475 0.91020 0.77784 1.18357 1.17918 0.86120 0.85973 0.85769 0.86814 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.04 10.56 101.05 1.07 1.10 16 2 O -0.36 -1.12 10.57 -39.26 -0.41 -1.53 16 3 C 0.47 1.84 7.48 36.00 0.27 2.11 16 4 O -0.50 -3.57 15.65 -18.76 -0.29 -3.86 16 5 C -0.10 -0.04 4.06 -90.84 -0.37 -0.41 16 6 C -0.12 -0.02 6.68 -26.09 -0.17 -0.19 16 7 C 0.14 -0.19 1.34 -131.26 -0.18 -0.37 16 8 C -0.12 -0.07 6.54 -26.20 -0.17 -0.24 16 9 C -0.11 0.47 6.08 -25.13 -0.15 0.31 16 10 C -0.13 0.68 7.09 -24.48 -0.17 0.50 16 11 C 0.09 -0.43 6.71 -2.39 -0.02 -0.44 16 12 N -0.60 0.84 3.17 -156.15 -0.49 0.34 16 13 C 0.51 0.54 7.58 -10.99 -0.08 0.46 16 14 O -0.50 -2.74 13.61 5.56 0.08 -2.66 16 15 C 0.10 -0.09 5.50 -5.19 -0.03 -0.12 16 16 N -0.47 -1.27 2.27 -115.71 -0.26 -1.53 16 17 C 0.07 0.21 9.89 -16.73 -0.17 0.05 16 18 C -0.15 -0.65 5.61 -102.71 -0.58 -1.22 16 19 C -0.04 -0.09 3.05 36.01 0.11 0.02 16 20 O -0.54 -1.72 12.86 -35.23 -0.45 -2.17 16 21 Si 0.68 0.59 30.79 -169.99 -5.23 -4.65 16 22 C -0.09 -0.47 6.35 -105.14 -0.67 -1.13 16 23 C -0.06 -0.29 10.05 -39.65 -0.40 -0.69 16 24 C -0.15 -0.48 9.97 -39.95 -0.40 -0.87 16 25 C -0.10 -0.28 10.01 -39.54 -0.40 -0.67 16 26 C -0.13 -0.42 10.00 -39.43 -0.39 -0.82 16 27 C 0.11 0.50 6.80 -83.99 -0.57 -0.07 16 28 H 0.06 0.11 8.13 -51.93 -0.42 -0.31 16 29 H 0.06 0.06 8.13 -51.93 -0.42 -0.36 16 30 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 31 H 0.13 -0.28 8.14 -51.93 -0.42 -0.71 16 32 H 0.10 0.35 6.50 -51.93 -0.34 0.01 16 33 H 0.08 -0.14 8.01 -51.93 -0.42 -0.55 16 34 H 0.08 -0.08 8.01 -51.93 -0.42 -0.50 16 35 H 0.11 0.48 6.03 -51.93 -0.31 0.16 16 36 H 0.09 -0.44 7.86 -51.93 -0.41 -0.85 16 37 H 0.09 -0.41 8.01 -51.93 -0.42 -0.83 16 38 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 39 H 0.09 -0.56 8.14 -51.93 -0.42 -0.98 16 40 H 0.08 -0.47 7.50 -51.93 -0.39 -0.86 16 41 H 0.08 -0.42 8.14 -51.93 -0.42 -0.84 16 42 H 0.12 -0.35 7.86 -51.93 -0.41 -0.76 16 43 H 0.12 -0.45 8.12 -51.93 -0.42 -0.88 16 44 H 0.17 0.07 6.30 -52.48 -0.33 -0.26 16 45 H 0.07 0.11 7.96 -51.93 -0.41 -0.31 16 46 H 0.37 -0.39 8.74 45.56 0.40 0.01 16 47 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 48 H -0.25 -0.71 7.04 56.52 0.40 -0.32 16 49 H 0.12 0.39 8.06 -52.49 -0.42 -0.04 16 50 H 0.12 0.14 8.06 -52.49 -0.42 -0.28 16 51 H 0.12 0.06 8.06 -52.49 -0.42 -0.36 16 52 H 0.11 0.15 8.06 -52.49 -0.42 -0.27 16 LS Contribution 424.51 15.07 6.40 6.40 Total: 0.00 -12.20 424.51 -11.87 -24.06 By element: Atomic # 1 Polarization: -3.98 SS G_CDS: -7.72 Total: -11.70 kcal Atomic # 6 Polarization: 0.77 SS G_CDS: -3.47 Total: -2.70 kcal Atomic # 7 Polarization: -0.43 SS G_CDS: -0.76 Total: -1.19 kcal Atomic # 8 Polarization: -9.14 SS G_CDS: -1.09 Total: -10.23 kcal Atomic # 14 Polarization: 0.59 SS G_CDS: -5.23 Total: -4.65 kcal Total LS contribution 6.40 Total: 6.40 kcal Total: -12.20 -11.87 -24.06 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_9818708.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.354 kcal (2) G-P(sol) polarization free energy of solvation -12.195 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.550 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.869 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.064 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.418 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds