Wall clock time and date at job start Sun Mar 7 2021 03:37:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34233 * 117.00091 * 2 1 4 4 O 1.20826 * 119.99585 * 0.02562 * 3 2 1 5 5 C 1.50692 * 120.00272 * 179.97438 * 3 2 1 6 6 C 1.53891 * 113.59747 * 179.97438 * 5 3 2 7 7 C 1.53148 * 86.89411 * 139.53318 * 6 5 3 8 8 C 1.53137 * 87.73411 * 334.92642 * 7 6 5 9 9 C 1.53738 * 114.76823 * 218.56838 * 7 6 5 10 10 C 1.55304 * 102.73824 * 251.58174 * 9 7 6 11 11 C 1.55224 * 101.55369 * 324.82735 * 10 9 7 12 12 N 1.46385 * 115.35759 * 92.05423 * 7 6 5 13 13 C 1.34776 * 125.79632 * 311.11422 * 12 7 6 14 14 O 1.21629 * 120.00718 * 6.47294 * 13 12 7 15 15 C 1.47272 * 119.99820 * 186.46762 * 13 12 7 16 16 C 1.36771 * 126.94169 * 186.78215 * 15 13 12 17 17 C 1.50693 * 125.80106 * 359.97438 * 16 15 13 18 18 N 1.34657 * 108.39212 * 179.97438 * 16 15 13 19 19 C 1.36445 * 110.30072 * 359.97438 * 18 16 15 20 20 C 1.50710 * 125.56888 * 179.97438 * 19 18 16 21 21 O 1.42898 * 109.46948 * 244.99801 * 20 19 18 22 22 Si 1.86296 * 109.47239 * 5.00178 * 20 19 18 23 23 C 1.34479 * 108.85965 * 359.97438 * 19 18 16 24 24 H 1.09008 * 109.47107 * 60.00310 * 1 2 3 25 25 H 1.09001 * 109.47272 * 179.97438 * 1 2 3 26 26 H 1.08993 * 109.47030 * 300.00044 * 1 2 3 27 27 H 1.09005 * 112.83389 * 48.86135 * 5 3 2 28 28 H 1.09006 * 113.64481 * 25.03680 * 6 5 3 29 29 H 1.09005 * 113.73317 * 254.04537 * 6 5 3 30 30 H 1.08998 * 113.64624 * 139.57226 * 8 7 6 31 31 H 1.08995 * 113.63976 * 270.57423 * 8 7 6 32 32 H 1.08995 * 110.76257 * 9.89720 * 9 7 6 33 33 H 1.09005 * 110.75785 * 133.09011 * 9 7 6 34 34 H 1.09002 * 110.98769 * 83.10552 * 10 9 7 35 35 H 1.08990 * 110.99150 * 206.88716 * 10 9 7 36 36 H 1.09001 * 110.50900 * 278.15803 * 11 10 9 37 37 H 1.08997 * 110.33661 * 155.77656 * 11 10 9 38 38 H 1.09001 * 109.47347 * 90.00701 * 17 16 15 39 39 H 1.09004 * 109.46740 * 210.00473 * 17 16 15 40 40 H 1.08995 * 109.47310 * 329.99967 * 17 16 15 41 41 H 0.97004 * 124.84678 * 179.97438 * 18 16 15 42 42 H 1.09004 * 109.46418 * 124.99730 * 20 19 18 43 43 H 0.96695 * 113.99911 * 59.99856 * 21 20 19 44 44 H 1.48493 * 110.00212 * 58.67368 * 22 20 19 45 45 H 1.48498 * 110.00014 * 180.02562 * 22 20 19 46 46 H 1.07999 * 126.83503 * 180.26584 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.1076 2.7155 -0.0001 7 6 5.1671 2.2292 0.9931 8 6 4.1907 1.1214 1.3988 9 6 5.5091 3.2282 2.1105 10 6 6.9331 3.7073 1.7174 11 6 7.5414 2.4126 1.1148 12 7 6.4228 1.7713 0.3962 13 6 6.5380 0.9066 -0.6312 14 8 5.5444 0.5263 -1.2206 15 6 7.8673 0.4221 -1.0402 16 6 8.1616 -0.3473 -2.1320 17 6 7.1688 -0.8576 -3.1443 18 7 9.4893 -0.5712 -2.1485 19 6 10.0855 0.0385 -1.0834 20 6 11.5591 0.0098 -0.7688 21 8 11.7702 -0.6876 0.4605 22 14 12.4703 -0.8605 -2.1410 23 6 9.1433 0.6692 -0.3602 24 1 -0.3634 0.5138 -0.8901 25 1 -0.3634 -1.0277 -0.0005 26 1 -0.3633 0.5138 0.8899 27 1 4.0236 0.6369 -0.7557 28 1 3.4143 3.4433 0.4217 29 1 4.5191 3.0291 -0.9596 30 1 4.6685 0.1551 1.5604 31 1 3.5206 1.4049 2.2103 32 1 4.8074 4.0622 2.1113 33 1 5.5194 2.7331 3.0816 34 1 6.8859 4.5035 0.9745 35 1 7.4934 4.0281 2.5955 36 1 7.9084 1.7589 1.9060 37 1 8.3459 2.6590 0.4218 38 1 7.0657 -0.1312 -3.9504 39 1 7.5204 -1.8054 -3.5520 40 1 6.2023 -1.0056 -2.6627 41 1 9.9553 -1.0916 -2.8216 42 1 11.9307 1.0303 -0.6761 43 1 11.4627 -1.6043 0.4504 44 1 12.2328 -0.1633 -3.4304 45 1 13.9245 -0.8960 -1.8425 46 1 9.2962 1.2458 0.5401 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15736542_9865296.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:37:44 Heat of formation + Delta-G solvation = -47.506560 kcal Electronic energy + Delta-G solvation = -30416.985708 eV Core-core repulsion = 26276.179184 eV Total energy + Delta-G solvation = -4140.806524 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.161 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.73725 -42.09036 -40.76221 -38.67354 -37.81881 -37.38475 -36.46074 -33.11308 -32.81009 -31.73668 -29.57446 -29.00092 -28.09117 -26.76128 -26.09532 -24.84834 -23.97738 -23.08489 -21.86467 -21.14734 -20.39486 -18.97384 -18.63648 -18.53395 -17.80852 -17.42350 -17.11963 -16.97825 -16.65768 -16.48764 -16.22888 -15.65975 -15.55801 -15.09559 -14.92985 -14.90128 -14.56604 -14.27784 -14.24640 -14.05256 -13.90996 -13.74962 -13.44142 -13.39269 -13.29313 -13.09841 -12.80841 -12.76990 -12.64923 -12.43742 -12.29511 -11.96716 -11.90919 -11.53991 -11.47226 -11.33926 -10.93824 -10.69179 -10.11789 -9.93481 -9.61742 -9.15819 -5.36905 0.69700 0.97823 1.16956 1.34958 1.51367 1.68933 1.85956 2.05929 2.14516 2.51232 3.24605 3.33757 3.45237 3.57459 3.62067 3.72506 3.78374 3.82861 4.02619 4.05451 4.12047 4.17627 4.30565 4.34306 4.35595 4.39992 4.41769 4.49295 4.57353 4.65476 4.70576 4.72689 4.76532 4.77950 4.87010 4.90262 4.93841 4.94751 5.05505 5.16126 5.17974 5.21149 5.54319 5.56752 5.67426 5.75302 5.85813 6.27892 6.38810 6.60707 7.07473 7.48695 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.517 6.517 5 C -0.143 4.143 6 C -0.116 4.116 7 C 0.144 3.856 8 C -0.122 4.122 9 C -0.116 4.116 10 C -0.136 4.136 11 C 0.097 3.903 12 N -0.592 5.592 13 C 0.615 3.385 14 O -0.536 6.536 15 C -0.238 4.238 16 C 0.128 3.872 17 C -0.102 4.102 18 N -0.544 5.544 19 C -0.031 4.031 20 C -0.032 4.032 21 O -0.534 6.534 22 Si 0.671 3.329 23 C -0.135 4.135 24 H 0.061 0.939 25 H 0.100 0.900 26 H 0.061 0.939 27 H 0.192 0.808 28 H 0.100 0.900 29 H 0.078 0.922 30 H 0.081 0.919 31 H 0.092 0.908 32 H 0.086 0.914 33 H 0.082 0.918 34 H 0.078 0.922 35 H 0.086 0.914 36 H 0.074 0.926 37 H 0.087 0.913 38 H 0.080 0.920 39 H 0.068 0.932 40 H 0.107 0.893 41 H 0.413 0.587 42 H 0.126 0.874 43 H 0.381 0.619 44 H -0.251 1.251 45 H -0.244 1.244 46 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.591 -3.049 0.312 5.520 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.274 6.274 3 C 0.313 3.687 4 O -0.405 6.405 5 C -0.161 4.161 6 C -0.154 4.154 7 C 0.058 3.942 8 C -0.160 4.160 9 C -0.154 4.154 10 C -0.174 4.174 11 C -0.026 4.026 12 N -0.323 5.323 13 C 0.409 3.591 14 O -0.418 6.418 15 C -0.248 4.248 16 C 0.009 3.991 17 C -0.160 4.160 18 N -0.144 5.144 19 C -0.139 4.139 20 C -0.145 4.145 21 O -0.339 6.339 22 Si 0.571 3.429 23 C -0.159 4.159 24 H 0.080 0.920 25 H 0.119 0.881 26 H 0.080 0.920 27 H 0.207 0.793 28 H 0.119 0.881 29 H 0.097 0.903 30 H 0.100 0.900 31 H 0.110 0.890 32 H 0.105 0.895 33 H 0.101 0.899 34 H 0.097 0.903 35 H 0.105 0.895 36 H 0.093 0.907 37 H 0.105 0.895 38 H 0.099 0.901 39 H 0.087 0.913 40 H 0.126 0.874 41 H 0.253 0.747 42 H 0.143 0.857 43 H 0.228 0.772 44 H -0.176 1.176 45 H -0.167 1.167 46 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 4.865 -2.437 -0.574 5.472 hybrid contribution -0.213 0.417 0.028 0.469 sum 4.653 -2.020 -0.547 5.102 Atomic orbital electron populations 1.23259 0.76752 1.03640 1.02425 1.86549 1.23094 1.33807 1.83935 1.24085 0.92260 0.81020 0.71363 1.90632 1.67395 1.36550 1.45925 1.24046 0.86279 1.02428 1.03310 1.23174 0.96572 0.95367 1.00335 1.21389 0.84395 0.94682 0.93694 1.23162 0.97469 0.99821 0.95584 1.22513 0.97434 0.98163 0.97320 1.22905 0.95992 0.96901 1.01561 1.22788 0.89849 0.93684 0.96255 1.47848 1.06753 1.44613 1.33105 1.17020 0.87604 0.76640 0.77869 1.90164 1.37201 1.59797 1.54629 1.19928 0.92782 1.11257 1.00802 1.20392 0.83559 0.97919 0.97252 1.20695 0.98126 1.00606 0.96529 1.41738 1.06779 1.42741 1.23097 1.20589 0.95962 1.04752 0.92562 1.24412 0.92275 1.01862 0.95913 1.86547 1.84332 1.29252 1.33724 0.95446 0.82525 0.88407 0.76508 1.22254 0.90046 1.02750 1.00845 0.91988 0.88146 0.92049 0.79300 0.88121 0.90306 0.89991 0.88951 0.89492 0.89924 0.90296 0.89508 0.90742 0.89457 0.90140 0.91301 0.87444 0.74748 0.85702 0.77178 1.17594 1.16727 0.82724 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.06 10.56 101.05 1.07 1.13 16 2 O -0.36 -1.62 10.57 -39.27 -0.41 -2.04 16 3 C 0.47 2.48 7.48 36.00 0.27 2.75 16 4 O -0.52 -3.89 15.64 -18.75 -0.29 -4.19 16 5 C -0.14 -0.50 3.61 -90.85 -0.33 -0.83 16 6 C -0.12 -0.30 6.38 -26.19 -0.17 -0.46 16 7 C 0.14 0.11 1.44 -131.35 -0.19 -0.07 16 8 C -0.12 -0.19 6.83 -26.19 -0.18 -0.37 16 9 C -0.12 0.16 6.30 -25.13 -0.16 0.00 16 10 C -0.14 0.31 7.10 -24.33 -0.17 0.14 16 11 C 0.10 -0.14 5.14 -2.25 -0.01 -0.15 16 12 N -0.59 -0.51 3.17 -157.38 -0.50 -1.01 16 13 C 0.61 1.53 7.55 -12.59 -0.10 1.43 16 14 O -0.54 -2.19 10.37 5.25 0.05 -2.13 16 15 C -0.24 -0.31 6.18 -103.34 -0.64 -0.95 16 16 C 0.13 0.00 7.17 -81.89 -0.59 -0.59 16 17 C -0.10 0.12 9.95 36.00 0.36 0.47 16 18 N -0.54 1.05 5.41 -5.42 -0.03 1.02 16 19 C -0.03 0.04 6.09 -81.86 -0.50 -0.46 16 20 C -0.03 0.07 2.98 36.01 0.11 0.18 16 21 O -0.53 0.83 12.88 -35.23 -0.45 0.37 16 22 Si 0.67 -2.10 30.96 -169.99 -5.26 -7.36 16 23 C -0.13 0.01 9.16 -37.50 -0.34 -0.34 16 24 H 0.06 0.12 8.14 -51.92 -0.42 -0.31 16 25 H 0.10 -0.08 8.14 -51.93 -0.42 -0.50 16 26 H 0.06 0.10 8.13 -51.93 -0.42 -0.32 16 27 H 0.19 0.89 4.12 -56.69 -0.23 0.65 16 28 H 0.10 0.29 7.21 -51.93 -0.37 -0.09 16 29 H 0.08 0.27 8.14 -51.93 -0.42 -0.15 16 30 H 0.08 0.15 8.14 -51.93 -0.42 -0.27 16 31 H 0.09 0.08 8.08 -51.93 -0.42 -0.34 16 32 H 0.09 -0.13 7.79 -51.93 -0.40 -0.54 16 33 H 0.08 -0.17 8.11 -51.93 -0.42 -0.59 16 34 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 35 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 36 H 0.07 -0.16 7.74 -51.93 -0.40 -0.56 16 37 H 0.09 -0.16 5.98 -51.93 -0.31 -0.47 16 38 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 39 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 40 H 0.11 0.06 6.35 -51.93 -0.33 -0.27 16 41 H 0.41 -1.85 6.72 -40.82 -0.27 -2.13 16 42 H 0.13 -0.25 7.96 -51.93 -0.41 -0.66 16 43 H 0.38 -1.93 8.70 45.56 0.40 -1.54 16 44 H -0.25 0.21 7.11 56.52 0.40 0.61 16 45 H -0.24 -0.09 7.11 56.52 0.40 0.31 16 46 H 0.16 -0.18 5.17 -52.49 -0.27 -0.45 16 LS Contribution 364.32 15.07 5.49 5.49 Total: 0.00 -8.63 364.32 -9.43 -18.06 By element: Atomic # 1 Polarization: -3.62 SS G_CDS: -6.46 Total: -10.08 kcal Atomic # 6 Polarization: 3.43 SS G_CDS: -1.57 Total: 1.87 kcal Atomic # 7 Polarization: 0.53 SS G_CDS: -0.53 Total: 0.01 kcal Atomic # 8 Polarization: -6.87 SS G_CDS: -1.11 Total: -7.98 kcal Atomic # 14 Polarization: -2.10 SS G_CDS: -5.26 Total: -7.36 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -8.63 -9.43 -18.06 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_9865296.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.442 kcal (2) G-P(sol) polarization free energy of solvation -8.631 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.073 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.434 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.065 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.507 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds