Wall clock time and date at job start Sun Mar 7 2021 07:23:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.52999 * 109.47277 * 2 1 4 4 C 1.53004 * 109.46731 * 119.99925 * 2 1 3 5 5 O 1.42894 * 109.47085 * 239.99367 * 2 1 3 6 6 C 1.42902 * 114.00130 * 54.98821 * 5 2 1 7 7 H 1.09000 * 109.46895 * 15.43493 * 6 5 2 8 8 C 1.52999 * 109.47165 * 135.43196 * 6 5 2 9 9 C 1.53002 * 109.47211 * 180.02562 * 8 6 5 10 10 C 1.53001 * 109.47080 * 300.00304 * 9 8 6 11 11 H 1.09003 * 109.46649 * 299.99519 * 10 9 8 12 12 N 1.46497 * 109.46901 * 180.02562 * 10 9 8 13 13 C 1.34771 * 120.00044 * 155.00166 * 12 10 9 14 14 O 1.21574 * 120.00179 * 359.97438 * 13 12 10 15 15 C 1.47701 * 120.00524 * 179.97438 * 13 12 10 16 16 C 1.39804 * 120.15779 * 179.71893 * 15 13 12 17 17 F 1.35098 * 120.08556 * 359.97438 * 16 15 13 18 18 C 1.38313 * 119.82752 * 179.74702 * 16 15 13 19 19 C 1.38183 * 120.14592 * 0.55634 * 18 16 15 20 20 C 1.50703 * 119.84135 * 179.72246 * 19 18 16 21 21 O 1.42898 * 109.47246 * 254.97506 * 20 19 18 22 22 Si 1.86294 * 109.47201 * 14.97674 * 20 19 18 23 23 C 1.38656 * 120.31865 * 359.69422 * 19 18 16 24 24 F 1.35100 * 119.92193 * 180.02562 * 23 19 18 25 25 C 1.38071 * 120.16114 * 0.02953 * 23 19 18 26 26 C 1.52999 * 109.47347 * 59.99779 * 10 9 8 27 27 C 1.52995 * 109.47479 * 255.43332 * 6 5 2 28 28 H 1.09002 * 109.47061 * 177.24163 * 1 2 3 29 29 H 1.09004 * 109.46879 * 57.23883 * 1 2 3 30 30 H 1.08995 * 109.47035 * 297.24307 * 1 2 3 31 31 H 1.08992 * 109.46986 * 59.99410 * 3 2 1 32 32 H 1.08997 * 109.47120 * 180.02562 * 3 2 1 33 33 H 1.09001 * 109.46591 * 299.99324 * 3 2 1 34 34 H 1.08996 * 109.47424 * 59.99526 * 4 2 1 35 35 H 1.09002 * 109.46926 * 179.97438 * 4 2 1 36 36 H 1.09003 * 109.47033 * 299.99776 * 4 2 1 37 37 H 1.08999 * 109.47060 * 300.00087 * 8 6 5 38 38 H 1.09000 * 109.46972 * 60.00344 * 8 6 5 39 39 H 1.09000 * 109.47120 * 60.00131 * 9 8 6 40 40 H 1.09001 * 109.47230 * 180.02562 * 9 8 6 41 41 H 0.97002 * 119.99942 * 334.99009 * 12 10 9 42 42 H 1.07997 * 119.92546 * 180.27570 * 18 16 15 43 43 H 1.08999 * 109.47390 * 134.97541 * 20 19 18 44 44 H 0.96699 * 113.99921 * 59.99353 * 21 20 19 45 45 H 1.48501 * 110.00251 * 180.02562 * 22 20 19 46 46 H 1.48505 * 110.00225 * 301.31827 * 22 20 19 47 47 H 1.07998 * 120.07294 * 179.97438 * 25 23 19 48 48 H 1.09000 * 109.46972 * 60.00100 * 26 10 9 49 49 H 1.08999 * 109.47060 * 180.02562 * 26 10 9 50 50 H 1.09000 * 109.47189 * 299.99981 * 27 6 5 51 51 H 1.09001 * 109.47023 * 59.99766 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0400 -0.7213 1.2493 5 8 2.0063 -0.6737 -1.1666 6 6 1.4939 -0.1467 -2.3921 7 1 1.0552 0.8344 -2.2104 8 6 2.6318 -0.0167 -3.4067 9 6 2.0833 0.5482 -4.7186 10 6 1.0123 -0.3943 -5.2714 11 1 1.4508 -1.3755 -5.4534 12 7 0.4875 0.1462 -6.5278 13 6 -0.0591 -0.6806 -7.4409 14 8 -0.1164 -1.8751 -7.2222 15 6 -0.5887 -0.1357 -8.7075 16 6 -1.1511 -0.9912 -9.6595 17 9 -1.2116 -2.3201 -9.4240 18 6 -1.6497 -0.4729 -10.8409 19 6 -1.5824 0.8853 -11.0860 20 6 -2.1221 1.4419 -12.3783 21 8 -1.0351 1.7816 -13.2414 22 14 -3.1953 0.1631 -13.2050 23 6 -1.0211 1.7388 -10.1483 24 9 -0.9598 3.0655 -10.3959 25 6 -0.5246 1.2360 -8.9621 26 6 -0.1256 -0.5244 -4.2568 27 6 0.4233 -1.0897 -2.9447 28 1 -0.3633 -1.0265 -0.0495 29 1 -0.3633 0.5561 -0.8642 30 1 -0.3633 0.4704 0.9136 31 1 1.6767 1.9563 0.8899 32 1 3.1300 1.4424 -0.0005 33 1 1.6768 1.9562 -0.8901 34 1 1.6766 -1.7489 1.2494 35 1 3.1300 -0.7217 1.2491 36 1 1.6766 -0.2074 2.1393 37 1 3.3945 0.6552 -3.0130 38 1 3.0704 -0.9978 -3.5884 39 1 1.6448 1.5294 -4.5365 40 1 2.8938 0.6404 -5.4415 41 1 0.5334 1.0993 -6.7024 42 1 -2.0886 -1.1318 -11.5755 43 1 -2.7137 2.3336 -12.1709 44 1 -0.4649 1.0344 -13.4685 45 1 -3.7333 0.6994 -14.4810 46 1 -2.4085 -1.0695 -13.4643 47 1 -0.0873 1.9020 -8.2329 48 1 -0.5640 0.4568 -4.0748 49 1 -0.8883 -1.1962 -4.6505 50 1 0.8620 -2.0708 -3.1265 51 1 -0.3873 -1.1824 -2.2220 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15739434_12360598.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:23:41 Heat of formation + Delta-G solvation = -179.344916 kcal Electronic energy + Delta-G solvation = -34406.927334 eV Core-core repulsion = 29522.754924 eV Total energy + Delta-G solvation = -4884.172410 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.179 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -50.12113 -50.09872 -41.59853 -40.69886 -39.95569 -38.36507 -37.75062 -35.44849 -34.03194 -33.13367 -31.91307 -31.38854 -29.80951 -28.28322 -28.24108 -27.55833 -24.42838 -24.30183 -23.75926 -22.97819 -21.76766 -21.15932 -20.85493 -19.67844 -18.87358 -18.66494 -17.98083 -17.52925 -17.37758 -17.25409 -17.01105 -16.69111 -16.48965 -16.23836 -16.02222 -15.93245 -15.85349 -15.63102 -15.28565 -15.13317 -14.82503 -14.66524 -14.55469 -14.18077 -14.11767 -14.05053 -13.82123 -13.40600 -13.26553 -13.19641 -13.04325 -12.95781 -12.81249 -12.69501 -12.64480 -12.59547 -12.42096 -12.20459 -12.14915 -11.93887 -11.61108 -11.48907 -11.23032 -11.12662 -10.79360 -10.61906 -10.40621 -10.18493 -9.83257 -4.96881 -0.82283 -0.31815 1.15104 1.37797 1.53305 1.81188 1.90537 2.23076 2.67755 2.78025 2.84290 3.09864 3.23713 3.42982 3.50120 3.60460 3.67161 3.77072 3.88369 3.91652 4.03406 4.08339 4.13456 4.16767 4.18370 4.21671 4.31297 4.37577 4.39604 4.43694 4.49128 4.57591 4.64101 4.66332 4.68169 4.70364 4.72771 4.79458 4.88396 4.92112 4.93104 5.02463 5.03625 5.08904 5.13185 5.16659 5.24890 5.29655 5.33953 5.35579 5.37632 5.43676 6.31132 6.37783 6.43515 6.99188 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.099 3.901 3 C -0.174 4.174 4 C -0.140 4.140 5 O -0.391 6.391 6 C 0.088 3.912 7 H 0.081 0.919 8 C -0.117 4.117 9 C -0.114 4.114 10 C 0.145 3.855 11 H 0.067 0.933 12 N -0.702 5.702 13 C 0.557 3.443 14 O -0.561 6.561 15 C -0.147 4.147 16 C 0.139 3.861 17 F -0.125 7.125 18 C -0.131 4.131 19 C -0.090 4.090 20 C -0.086 4.086 21 O -0.540 6.540 22 Si 0.771 3.229 23 C 0.105 3.895 24 F -0.127 7.127 25 C -0.076 4.076 26 C -0.120 4.120 27 C -0.131 4.131 28 H 0.056 0.944 29 H 0.065 0.935 30 H 0.076 0.924 31 H 0.076 0.924 32 H 0.059 0.941 33 H 0.065 0.935 34 H 0.054 0.946 35 H 0.058 0.942 36 H 0.084 0.916 37 H 0.080 0.920 38 H 0.059 0.941 39 H 0.094 0.906 40 H 0.085 0.915 41 H 0.416 0.584 42 H 0.170 0.830 43 H 0.134 0.866 44 H 0.390 0.610 45 H -0.294 1.294 46 H -0.272 1.272 47 H 0.182 0.818 48 H 0.085 0.915 49 H 0.051 0.949 50 H 0.053 0.947 51 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.648 5.935 2.101 6.508 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.061 3.939 3 C -0.232 4.232 4 C -0.198 4.198 5 O -0.311 6.311 6 C 0.031 3.969 7 H 0.099 0.901 8 C -0.155 4.155 9 C -0.152 4.152 10 C 0.041 3.959 11 H 0.085 0.915 12 N -0.355 5.355 13 C 0.344 3.656 14 O -0.440 6.440 15 C -0.151 4.151 16 C 0.118 3.882 17 F -0.103 7.103 18 C -0.149 4.149 19 C -0.092 4.092 20 C -0.195 4.195 21 O -0.348 6.348 22 Si 0.675 3.325 23 C 0.085 3.915 24 F -0.105 7.105 25 C -0.095 4.095 26 C -0.158 4.158 27 C -0.169 4.169 28 H 0.075 0.925 29 H 0.084 0.916 30 H 0.095 0.905 31 H 0.095 0.905 32 H 0.078 0.922 33 H 0.084 0.916 34 H 0.074 0.926 35 H 0.077 0.923 36 H 0.102 0.898 37 H 0.099 0.901 38 H 0.078 0.922 39 H 0.113 0.887 40 H 0.104 0.896 41 H 0.255 0.745 42 H 0.188 0.812 43 H 0.151 0.849 44 H 0.240 0.760 45 H -0.221 1.221 46 H -0.198 1.198 47 H 0.199 0.801 48 H 0.103 0.897 49 H 0.070 0.930 50 H 0.072 0.928 51 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -1.919 5.040 1.646 5.639 hybrid contribution 1.030 0.112 -0.447 1.128 sum -0.889 5.152 1.199 5.364 Atomic orbital electron populations 1.22540 0.95081 1.02499 1.03361 1.21684 0.93605 0.92537 0.86123 1.22415 1.01928 0.95585 1.03227 1.21801 1.01680 1.00671 0.95600 1.87994 1.70281 1.58934 1.13900 1.22156 0.93808 0.96945 0.84032 0.90089 1.21614 0.97784 1.02104 0.93985 1.21729 0.97784 0.99089 0.96583 1.21061 0.94245 0.98373 0.82242 0.91473 1.45812 1.60399 1.11499 1.17743 1.18094 0.77979 0.85994 0.83507 1.90878 1.57432 1.16622 1.79050 1.19830 1.05665 0.93914 0.95722 1.17816 0.98277 0.77783 0.94312 1.91603 1.93604 1.30652 1.94481 1.21096 1.01773 0.95161 0.96858 1.20441 0.98826 0.92496 0.97455 1.25294 0.94718 1.10820 0.88634 1.86654 1.41703 1.39480 1.66961 0.93846 0.83197 0.74121 0.81362 1.17337 1.01290 0.78187 0.94683 1.91575 1.94143 1.30427 1.94372 1.21352 0.97927 0.93453 0.96766 1.21814 0.97587 1.02212 0.94228 1.21966 0.98771 0.99489 0.96699 0.92525 0.91587 0.90545 0.90545 0.92220 0.91637 0.92649 0.92335 0.89751 0.90097 0.92250 0.88707 0.89638 0.74481 0.81249 0.84877 0.76035 1.22093 1.19785 0.80057 0.89661 0.93030 0.92813 0.91051 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.36 7.25 71.98 0.52 0.88 16 2 C 0.10 -0.02 1.11 -10.79 -0.01 -0.03 16 3 C -0.17 0.51 8.45 71.98 0.61 1.12 16 4 C -0.14 0.04 8.84 71.98 0.64 0.68 16 5 O -0.39 -1.38 9.63 -148.98 -1.43 -2.81 16 6 C 0.09 -0.08 1.64 30.59 0.05 -0.03 16 7 H 0.08 -0.31 5.09 -2.39 -0.01 -0.32 16 8 C -0.12 0.28 5.57 30.59 0.17 0.45 16 9 C -0.11 0.71 5.39 30.60 0.16 0.87 16 10 C 0.14 -0.19 2.45 44.99 0.11 -0.08 16 11 H 0.07 0.32 7.58 -2.39 -0.02 0.31 16 12 N -0.70 2.15 5.03 -445.55 -2.24 -0.09 16 13 C 0.56 2.33 7.73 86.74 0.67 3.00 16 14 O -0.56 -7.72 15.00 -3.95 -0.06 -7.78 16 15 C -0.15 -0.07 5.88 -20.06 -0.12 -0.19 16 16 C 0.14 0.37 7.28 22.67 0.17 0.53 16 17 F -0.13 -1.12 15.55 44.97 0.70 -0.42 16 18 C -0.13 0.32 8.62 22.27 0.19 0.51 16 19 C -0.09 0.29 5.27 -19.78 -0.10 0.19 16 20 C -0.09 0.31 2.44 71.24 0.17 0.49 16 21 O -0.54 0.16 12.88 -148.98 -1.92 -1.76 16 22 Si 0.77 -3.84 30.23 68.60 2.07 -1.77 16 23 C 0.10 -0.28 7.23 22.33 0.16 -0.12 16 24 F -0.13 0.01 16.73 44.97 0.75 0.76 16 25 C -0.08 0.39 9.51 22.57 0.21 0.60 16 26 C -0.12 0.09 5.50 30.61 0.17 0.26 16 27 C -0.13 -0.10 5.34 30.61 0.16 0.06 16 28 H 0.06 0.00 7.71 -2.39 -0.02 -0.02 16 29 H 0.07 -0.22 6.33 -2.38 -0.02 -0.23 16 30 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 31 H 0.08 -0.36 8.14 -2.39 -0.02 -0.37 16 32 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 33 H 0.06 -0.29 6.50 -2.39 -0.02 -0.30 16 34 H 0.05 0.07 8.14 -2.39 -0.02 0.05 16 35 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 36 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 37 H 0.08 -0.26 8.14 -2.39 -0.02 -0.28 16 38 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 39 H 0.09 -0.98 8.14 -2.39 -0.02 -1.00 16 40 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 41 H 0.42 -4.29 6.63 -92.71 -0.62 -4.91 16 42 H 0.17 -0.91 4.83 -2.91 -0.01 -0.92 16 43 H 0.13 -0.64 7.89 -2.39 -0.02 -0.66 16 44 H 0.39 -2.54 8.70 -74.06 -0.64 -3.18 16 45 H -0.29 -0.79 7.11 99.48 0.71 -0.08 16 46 H -0.27 0.57 6.68 99.48 0.66 1.23 16 47 H 0.18 -2.19 6.40 -2.91 -0.02 -2.21 16 48 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 49 H 0.05 0.22 8.14 -2.39 -0.02 0.20 16 50 H 0.05 0.26 8.14 -2.39 -0.02 0.24 16 51 H 0.07 0.06 6.37 -2.39 -0.02 0.04 16 Total: 0.00 -20.34 404.24 1.53 -18.82 By element: Atomic # 1 Polarization: -13.84 SS G_CDS: -0.29 Total: -14.13 kcal Atomic # 6 Polarization: 5.25 SS G_CDS: 3.94 Total: 9.19 kcal Atomic # 7 Polarization: 2.15 SS G_CDS: -2.24 Total: -0.09 kcal Atomic # 8 Polarization: -8.94 SS G_CDS: -3.41 Total: -12.35 kcal Atomic # 9 Polarization: -1.11 SS G_CDS: 1.45 Total: 0.34 kcal Atomic # 14 Polarization: -3.84 SS G_CDS: 2.07 Total: -1.77 kcal Total: -20.34 1.53 -18.82 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15739434_12360598.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -160.527 kcal (2) G-P(sol) polarization free energy of solvation -20.343 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -180.870 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.525 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.817 kcal (6) G-S(sol) free energy of system = (1) + (5) -179.345 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds