Wall clock time and date at job start Sun Mar 7 2021 04:45:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.42897 * 109.47369 * 2 1 4 4 C 1.35903 * 117.00367 * 84.84128 * 3 2 1 5 5 C 1.38736 * 120.05289 * 354.62387 * 4 3 2 6 6 C 1.38141 * 119.94292 * 179.97438 * 5 4 3 7 7 C 1.38262 * 120.05512 * 0.02562 * 6 5 4 8 8 C 1.50703 * 119.94354 * 179.97438 * 7 6 5 9 9 O 1.42905 * 109.46799 * 299.99860 * 8 7 6 10 10 Si 1.86307 * 109.47032 * 180.02562 * 8 7 6 11 11 C 1.38263 * 120.11486 * 0.27142 * 7 6 5 12 12 C 1.38150 * 120.05186 * 359.45144 * 11 7 6 13 13 C 1.50703 * 109.47419 * 239.99655 * 2 1 3 14 14 O 1.21272 * 120.00006 * 120.00236 * 13 2 1 15 15 N 1.34773 * 119.99589 * 300.00329 * 13 2 1 16 16 C 1.46504 * 119.99568 * 180.02562 * 15 13 2 17 17 H 1.08994 * 112.84953 * 336.19310 * 16 15 13 18 18 C 1.53778 * 113.61777 * 107.49997 * 16 15 13 19 19 C 1.53785 * 87.08152 * 139.97836 * 18 16 15 20 20 H 1.09002 * 113.61377 * 89.11691 * 19 18 16 21 21 C 1.52999 * 113.69076 * 220.01055 * 19 18 16 22 22 F 1.39904 * 109.46853 * 277.53241 * 21 19 18 23 23 C 1.53782 * 113.61154 * 204.99979 * 16 15 13 24 24 H 1.09003 * 109.46814 * 60.00297 * 1 2 3 25 25 H 1.09002 * 109.47068 * 180.02562 * 1 2 3 26 26 H 1.08997 * 109.47174 * 300.00258 * 1 2 3 27 27 H 1.09006 * 109.47308 * 119.99595 * 2 1 3 28 28 H 1.08000 * 120.02544 * 359.96355 * 5 4 3 29 29 H 1.08003 * 119.97211 * 180.02562 * 6 5 4 30 30 H 1.08994 * 109.47206 * 60.00029 * 8 7 6 31 31 H 0.96707 * 113.99443 * 180.02562 * 9 8 7 32 32 H 1.48498 * 110.00282 * 59.99946 * 10 8 7 33 33 H 1.48503 * 109.99819 * 181.31883 * 10 8 7 34 34 H 1.07997 * 119.97600 * 179.72877 * 11 7 6 35 35 H 1.08001 * 120.02593 * 180.27598 * 12 11 7 36 36 H 0.96997 * 120.00767 * 359.97438 * 15 13 2 37 37 H 1.08995 * 113.61559 * 254.52497 * 18 16 15 38 38 H 1.09004 * 113.61219 * 25.43420 * 18 16 15 39 39 H 1.09000 * 109.47746 * 37.53479 * 21 19 18 40 40 H 1.09000 * 109.47371 * 157.53609 * 21 19 18 41 41 H 1.09000 * 113.61658 * 334.56431 * 23 16 15 42 42 H 1.08996 * 113.61825 * 105.46900 * 23 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3472 0.0000 4 6 2.1094 1.9653 1.2060 5 6 1.6554 1.3306 2.3530 6 6 1.7617 1.9607 3.5777 7 6 2.3197 3.2230 3.6609 8 6 2.4339 3.9084 4.9982 9 8 1.1316 4.0677 5.5645 10 14 3.2216 5.5817 4.7732 11 6 2.7674 3.8602 2.5184 12 6 2.6685 3.2320 1.2920 13 6 2.0324 -0.7105 -1.2304 14 8 2.7297 -0.1212 -2.0287 15 7 1.7068 -2.0008 -1.4436 16 6 2.1956 -2.6916 -2.6394 17 1 2.4394 -2.0085 -3.4530 18 6 3.2982 -3.7231 -2.3476 19 6 2.6150 -4.6301 -3.3847 20 1 2.9746 -4.4776 -4.4023 21 6 2.5791 -6.1057 -2.9821 22 9 3.8007 -6.7068 -3.3041 23 6 1.3128 -3.8743 -3.0717 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5139 0.8899 27 1 1.8934 -0.5138 0.8901 28 1 1.2189 0.3448 2.2884 29 1 1.4088 1.4669 4.4711 30 1 3.0486 3.3038 5.6649 31 1 1.1289 4.5032 6.4280 32 1 2.3926 6.4155 3.8662 33 1 3.3690 6.2547 6.0887 34 1 3.1988 4.8480 2.5854 35 1 3.0224 3.7283 0.4005 36 1 1.1494 -2.4723 -0.8050 37 1 4.2939 -3.3936 -2.6442 38 1 3.2673 -4.1199 -1.3328 39 1 2.4067 -6.1855 -1.9087 40 1 1.7742 -6.6090 -3.5177 41 1 0.7392 -4.3124 -2.2550 42 1 0.7058 -3.6669 -3.9530 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_10157680.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:45:37 Heat of formation + Delta-G solvation = -99.744569 kcal Electronic energy + Delta-G solvation = -24985.662879 eV Core-core repulsion = 21041.009032 eV Total energy + Delta-G solvation = -3944.653847 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -48.54877 -41.81900 -40.95780 -39.69112 -38.73190 -37.31700 -35.02344 -33.16833 -32.07180 -31.47305 -29.45792 -26.94736 -26.73623 -25.68220 -24.31618 -23.39181 -22.17430 -21.55702 -20.81793 -19.46576 -18.63719 -18.40479 -17.73776 -17.10244 -16.91813 -16.82122 -16.81111 -16.71919 -16.06794 -15.95319 -15.69872 -15.37849 -15.28540 -14.84664 -14.39532 -14.37145 -14.01661 -13.89226 -13.73921 -13.67636 -13.47942 -13.40597 -13.00753 -12.96386 -12.64335 -12.33303 -12.20629 -12.13402 -11.87803 -11.68904 -11.66166 -11.40120 -10.80173 -10.49523 -10.19110 -10.00396 -9.14913 -4.96004 0.27894 0.38674 1.28813 1.40960 1.50187 1.59743 1.96123 2.44615 2.64677 3.16676 3.22515 3.34160 3.34463 3.46814 3.54648 3.56953 3.73517 3.81430 3.84849 3.90486 3.92279 4.01759 4.07500 4.20500 4.27616 4.33860 4.41380 4.43999 4.45252 4.55153 4.59048 4.62484 4.70223 4.78860 4.88248 4.89659 5.01684 5.09670 5.20773 5.32618 5.36652 5.53340 5.68321 6.22395 6.37609 6.43221 7.05610 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.066 3.934 3 O -0.283 6.283 4 C 0.134 3.866 5 C -0.212 4.212 6 C -0.050 4.050 7 C -0.111 4.111 8 C -0.071 4.071 9 O -0.537 6.537 10 Si 0.679 3.321 11 C -0.073 4.073 12 C -0.141 4.141 13 C 0.520 3.480 14 O -0.510 6.510 15 N -0.717 5.717 16 C 0.125 3.875 17 H 0.120 0.880 18 C -0.147 4.147 19 C -0.144 4.144 20 H 0.107 0.893 21 C 0.074 3.926 22 F -0.216 7.216 23 C -0.137 4.137 24 H 0.077 0.923 25 H 0.079 0.921 26 H 0.079 0.921 27 H 0.102 0.898 28 H 0.131 0.869 29 H 0.128 0.872 30 H 0.075 0.925 31 H 0.379 0.621 32 H -0.254 1.254 33 H -0.261 1.261 34 H 0.134 0.866 35 H 0.139 0.861 36 H 0.402 0.598 37 H 0.079 0.921 38 H 0.088 0.912 39 H 0.075 0.925 40 H 0.077 0.923 41 H 0.091 0.909 42 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.919 -3.396 3.031 4.940 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.006 3.994 3 O -0.196 6.196 4 C 0.089 3.911 5 C -0.230 4.230 6 C -0.068 4.068 7 C -0.111 4.111 8 C -0.180 4.180 9 O -0.345 6.345 10 Si 0.580 3.420 11 C -0.090 4.090 12 C -0.160 4.160 13 C 0.305 3.695 14 O -0.384 6.384 15 N -0.370 5.370 16 C 0.020 3.980 17 H 0.138 0.862 18 C -0.185 4.185 19 C -0.164 4.164 20 H 0.126 0.874 21 C 0.019 3.981 22 F -0.197 7.197 23 C -0.175 4.175 24 H 0.096 0.904 25 H 0.097 0.903 26 H 0.098 0.902 27 H 0.119 0.881 28 H 0.149 0.851 29 H 0.146 0.854 30 H 0.093 0.907 31 H 0.227 0.773 32 H -0.179 1.179 33 H -0.187 1.187 34 H 0.152 0.848 35 H 0.156 0.844 36 H 0.237 0.763 37 H 0.097 0.903 38 H 0.107 0.893 39 H 0.093 0.907 40 H 0.095 0.905 41 H 0.110 0.890 42 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -1.593 -2.301 1.778 3.316 hybrid contribution -1.186 -0.541 1.424 1.931 sum -2.779 -2.842 3.202 5.104 Atomic orbital electron populations 1.22368 0.92363 1.03846 1.04978 1.22199 0.95867 0.83359 0.97999 1.86219 1.80922 1.25363 1.27071 1.19061 0.95262 0.92822 0.83947 1.21294 1.07296 1.01840 0.92618 1.20759 0.95185 0.93788 0.97057 1.19159 1.03262 0.95404 0.93312 1.24719 0.88959 1.09749 0.94598 1.86589 1.27143 1.81923 1.38808 0.95088 0.88949 0.75726 0.82201 1.20768 0.98116 0.98955 0.91198 1.20380 1.03379 0.93551 0.98642 1.20132 0.80447 0.81974 0.86985 1.90775 1.36072 1.65667 1.45840 1.45848 1.54139 1.11449 1.25584 1.22538 0.94888 0.92158 0.88366 0.86205 1.23556 0.99576 0.96003 0.99409 1.23013 0.98176 0.93817 1.01361 0.87434 1.21961 0.82917 0.91849 1.01415 1.92792 1.47300 1.85026 1.94603 1.23334 0.96349 0.95287 1.02537 0.90414 0.90258 0.90239 0.88095 0.85101 0.85415 0.90680 0.77305 1.17883 1.18673 0.84838 0.84354 0.76315 0.90256 0.89304 0.90690 0.90473 0.89037 0.89827 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.42 9.07 37.16 0.34 0.76 16 2 C 0.07 -0.02 2.64 -27.88 -0.07 -0.09 16 3 O -0.28 -0.89 9.33 -39.35 -0.37 -1.25 16 4 C 0.13 0.30 6.60 -39.22 -0.26 0.04 16 5 C -0.21 -0.14 8.24 -39.43 -0.32 -0.47 16 6 C -0.05 -0.05 9.60 -39.61 -0.38 -0.44 16 7 C -0.11 -0.15 5.42 -104.60 -0.57 -0.72 16 8 C -0.07 0.00 2.81 36.01 0.10 0.10 16 9 O -0.54 -0.61 12.74 -35.23 -0.45 -1.06 16 10 Si 0.68 -0.45 29.78 -169.99 -5.06 -5.52 16 11 C -0.07 -0.08 8.66 -39.60 -0.34 -0.42 16 12 C -0.14 -0.28 9.99 -39.43 -0.39 -0.67 16 13 C 0.52 0.75 7.23 -10.99 -0.08 0.67 16 14 O -0.51 -3.23 16.10 -14.35 -0.23 -3.46 16 15 N -0.72 1.47 5.25 -53.02 -0.28 1.19 16 16 C 0.13 -0.20 4.24 -67.12 -0.28 -0.49 16 17 H 0.12 0.05 7.46 -51.93 -0.39 -0.34 16 18 C -0.15 0.25 7.43 -25.92 -0.19 0.05 16 19 C -0.14 0.36 4.09 -89.81 -0.37 -0.01 16 20 H 0.11 -0.22 8.14 -51.93 -0.42 -0.64 16 21 C 0.07 -0.16 7.35 37.16 0.27 0.11 16 22 F -0.22 -0.39 17.36 2.25 0.04 -0.35 16 23 C -0.14 0.52 7.39 -25.92 -0.19 0.33 16 24 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 25 H 0.08 -0.40 7.57 -51.93 -0.39 -0.79 16 26 H 0.08 -0.18 6.90 -51.93 -0.36 -0.54 16 27 H 0.10 -0.25 6.32 -51.93 -0.33 -0.58 16 28 H 0.13 -0.24 5.43 -52.49 -0.28 -0.52 16 29 H 0.13 -0.01 8.06 -52.48 -0.42 -0.43 16 30 H 0.08 -0.13 7.96 -51.93 -0.41 -0.54 16 31 H 0.38 -1.06 8.74 45.56 0.40 -0.66 16 32 H -0.25 -0.65 7.11 56.52 0.40 -0.24 16 33 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 34 H 0.13 -0.11 4.87 -52.49 -0.26 -0.37 16 35 H 0.14 0.15 8.06 -52.49 -0.42 -0.28 16 36 H 0.40 -2.10 8.15 -40.82 -0.33 -2.43 16 37 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 38 H 0.09 -0.22 7.97 -51.93 -0.41 -0.63 16 39 H 0.07 -0.27 7.95 -51.93 -0.41 -0.69 16 40 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 41 H 0.09 -0.49 8.08 -51.93 -0.42 -0.91 16 42 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 LS Contribution 349.77 15.07 5.27 5.27 Total: 0.00 -9.73 349.77 -9.58 -19.31 By element: Atomic # 1 Polarization: -7.14 SS G_CDS: -5.76 Total: -12.90 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: -2.75 Total: -1.24 kcal Atomic # 7 Polarization: 1.47 SS G_CDS: -0.28 Total: 1.19 kcal Atomic # 8 Polarization: -4.73 SS G_CDS: -1.05 Total: -5.77 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.04 Total: -0.35 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.06 Total: -5.52 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -9.73 -9.58 -19.31 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_10157680.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.430 kcal (2) G-P(sol) polarization free energy of solvation -9.732 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.162 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.583 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.314 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.745 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds