Wall clock time and date at job start Sun Mar 7 2021 04:45:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.42897 * 109.47369 * 2 1 4 4 C 1.35903 * 117.00367 * 84.84128 * 3 2 1 5 5 C 1.38736 * 120.05289 * 354.62387 * 4 3 2 6 6 C 1.38141 * 119.94292 * 179.97438 * 5 4 3 7 7 C 1.38262 * 120.05512 * 0.02562 * 6 5 4 8 8 C 1.50703 * 119.94354 * 179.97438 * 7 6 5 9 9 O 1.42905 * 109.46799 * 299.99860 * 8 7 6 10 10 Si 1.86307 * 109.47032 * 180.02562 * 8 7 6 11 11 C 1.38263 * 120.11486 * 0.27142 * 7 6 5 12 12 C 1.38150 * 120.05186 * 359.45144 * 11 7 6 13 13 C 1.50703 * 109.47419 * 239.99655 * 2 1 3 14 14 O 1.21272 * 120.00006 * 120.00236 * 13 2 1 15 15 N 1.34773 * 119.99589 * 300.00329 * 13 2 1 16 16 C 1.46504 * 119.99568 * 180.02562 * 15 13 2 17 17 H 1.08994 * 112.84953 * 336.19310 * 16 15 13 18 18 C 1.53778 * 113.61777 * 107.49997 * 16 15 13 19 19 C 1.53785 * 87.08152 * 139.97836 * 18 16 15 20 20 H 1.09002 * 113.61377 * 89.11691 * 19 18 16 21 21 C 1.52999 * 113.69076 * 220.01055 * 19 18 16 22 22 F 1.39904 * 109.46853 * 277.53241 * 21 19 18 23 23 C 1.53782 * 113.61154 * 204.99979 * 16 15 13 24 24 H 1.09003 * 109.46814 * 60.00297 * 1 2 3 25 25 H 1.09002 * 109.47068 * 180.02562 * 1 2 3 26 26 H 1.08997 * 109.47174 * 300.00258 * 1 2 3 27 27 H 1.09006 * 109.47308 * 119.99595 * 2 1 3 28 28 H 1.08000 * 120.02544 * 359.96355 * 5 4 3 29 29 H 1.08003 * 119.97211 * 180.02562 * 6 5 4 30 30 H 1.08994 * 109.47206 * 60.00029 * 8 7 6 31 31 H 0.96707 * 113.99443 * 180.02562 * 9 8 7 32 32 H 1.48498 * 110.00282 * 59.99946 * 10 8 7 33 33 H 1.48503 * 109.99819 * 181.31883 * 10 8 7 34 34 H 1.07997 * 119.97600 * 179.72877 * 11 7 6 35 35 H 1.08001 * 120.02593 * 180.27598 * 12 11 7 36 36 H 0.96997 * 120.00767 * 359.97438 * 15 13 2 37 37 H 1.08995 * 113.61559 * 254.52497 * 18 16 15 38 38 H 1.09004 * 113.61219 * 25.43420 * 18 16 15 39 39 H 1.09000 * 109.47746 * 37.53479 * 21 19 18 40 40 H 1.09000 * 109.47371 * 157.53609 * 21 19 18 41 41 H 1.09000 * 113.61658 * 334.56431 * 23 16 15 42 42 H 1.08996 * 113.61825 * 105.46900 * 23 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3472 0.0000 4 6 2.1094 1.9653 1.2060 5 6 1.6554 1.3306 2.3530 6 6 1.7617 1.9607 3.5777 7 6 2.3197 3.2230 3.6609 8 6 2.4339 3.9084 4.9982 9 8 1.1316 4.0677 5.5645 10 14 3.2216 5.5817 4.7732 11 6 2.7674 3.8602 2.5184 12 6 2.6685 3.2320 1.2920 13 6 2.0324 -0.7105 -1.2304 14 8 2.7297 -0.1212 -2.0287 15 7 1.7068 -2.0008 -1.4436 16 6 2.1956 -2.6916 -2.6394 17 1 2.4394 -2.0085 -3.4530 18 6 3.2982 -3.7231 -2.3476 19 6 2.6150 -4.6301 -3.3847 20 1 2.9746 -4.4776 -4.4023 21 6 2.5791 -6.1057 -2.9821 22 9 3.8007 -6.7068 -3.3041 23 6 1.3128 -3.8743 -3.0717 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5139 0.8899 27 1 1.8934 -0.5138 0.8901 28 1 1.2189 0.3448 2.2884 29 1 1.4088 1.4669 4.4711 30 1 3.0486 3.3038 5.6649 31 1 1.1289 4.5032 6.4280 32 1 2.3926 6.4155 3.8662 33 1 3.3690 6.2547 6.0887 34 1 3.1988 4.8480 2.5854 35 1 3.0224 3.7283 0.4005 36 1 1.1494 -2.4723 -0.8050 37 1 4.2939 -3.3936 -2.6442 38 1 3.2673 -4.1199 -1.3328 39 1 2.4067 -6.1855 -1.9087 40 1 1.7742 -6.6090 -3.5177 41 1 0.7392 -4.3124 -2.2550 42 1 0.7058 -3.6669 -3.9530 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_10157680.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:45:36 Heat of formation + Delta-G solvation = -99.411518 kcal Electronic energy + Delta-G solvation = -24985.648437 eV Core-core repulsion = 21041.009032 eV Total energy + Delta-G solvation = -3944.639405 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -48.53011 -41.85633 -40.94547 -39.66370 -38.79252 -37.34569 -35.06878 -33.10631 -32.10352 -31.48625 -29.30670 -26.77493 -26.68862 -25.63060 -24.31406 -23.32838 -22.19889 -21.54844 -20.68640 -19.48902 -18.63316 -18.39140 -17.71772 -17.01657 -16.89799 -16.83208 -16.77439 -16.67664 -16.06958 -15.94125 -15.69309 -15.43952 -15.29286 -14.84590 -14.40749 -14.36138 -14.01905 -13.90945 -13.67196 -13.46251 -13.43817 -13.33799 -12.93369 -12.88829 -12.50713 -12.36035 -12.24363 -12.01126 -11.86630 -11.72936 -11.51277 -11.27291 -10.89568 -10.48351 -10.15921 -10.04924 -9.21495 -4.92676 0.23156 0.32087 1.31169 1.36276 1.50835 1.59073 1.94603 2.48486 2.60685 3.35621 3.39178 3.40371 3.44792 3.62819 3.68249 3.71825 3.80511 3.84414 3.88758 3.92214 4.12093 4.23050 4.24607 4.28422 4.32775 4.48353 4.56892 4.60075 4.63286 4.67369 4.69652 4.78568 4.81180 4.97671 4.98095 5.04877 5.08069 5.17276 5.21944 5.27522 5.48743 5.49994 5.66450 6.25228 6.44174 6.60522 7.08367 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.063 3.937 3 O -0.313 6.313 4 C 0.119 3.881 5 C -0.207 4.207 6 C -0.057 4.057 7 C -0.124 4.124 8 C -0.075 4.075 9 O -0.558 6.558 10 Si 0.751 3.249 11 C -0.079 4.079 12 C -0.160 4.160 13 C 0.516 3.484 14 O -0.571 6.571 15 N -0.696 5.696 16 C 0.116 3.884 17 H 0.092 0.908 18 C -0.148 4.148 19 C -0.143 4.143 20 H 0.096 0.904 21 C 0.066 3.934 22 F -0.242 7.242 23 C -0.116 4.116 24 H 0.059 0.941 25 H 0.113 0.887 26 H 0.082 0.918 27 H 0.128 0.872 28 H 0.157 0.843 29 H 0.142 0.858 30 H 0.098 0.902 31 H 0.395 0.605 32 H -0.302 1.302 33 H -0.285 1.285 34 H 0.146 0.854 35 H 0.136 0.864 36 H 0.421 0.579 37 H 0.056 0.944 38 H 0.103 0.897 39 H 0.095 0.905 40 H 0.094 0.906 41 H 0.119 0.881 42 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.202 -5.145 4.654 7.641 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C 0.004 3.996 3 O -0.226 6.226 4 C 0.074 3.926 5 C -0.226 4.226 6 C -0.075 4.075 7 C -0.124 4.124 8 C -0.184 4.184 9 O -0.368 6.368 10 Si 0.657 3.343 11 C -0.097 4.097 12 C -0.179 4.179 13 C 0.302 3.698 14 O -0.449 6.449 15 N -0.349 5.349 16 C 0.011 3.989 17 H 0.110 0.890 18 C -0.187 4.187 19 C -0.162 4.162 20 H 0.114 0.886 21 C 0.012 3.988 22 F -0.223 7.223 23 C -0.154 4.154 24 H 0.078 0.922 25 H 0.131 0.869 26 H 0.101 0.899 27 H 0.145 0.855 28 H 0.175 0.825 29 H 0.159 0.841 30 H 0.116 0.884 31 H 0.245 0.755 32 H -0.230 1.230 33 H -0.212 1.212 34 H 0.163 0.837 35 H 0.154 0.846 36 H 0.260 0.740 37 H 0.074 0.926 38 H 0.121 0.879 39 H 0.113 0.887 40 H 0.112 0.888 41 H 0.138 0.862 42 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -2.895 -4.104 3.437 6.086 hybrid contribution -0.812 0.018 0.912 1.221 sum -3.707 -4.086 4.349 7.025 Atomic orbital electron populations 1.22380 0.90528 1.05839 1.04242 1.22448 0.97137 0.82164 0.97880 1.86184 1.81489 1.27058 1.27870 1.19239 0.95928 0.93096 0.84303 1.21530 1.06512 1.02722 0.91787 1.21006 0.95043 0.93793 0.97694 1.19429 1.03245 0.95873 0.93887 1.24830 0.88884 1.10208 0.94480 1.86540 1.27813 1.82315 1.40094 0.94252 0.87409 0.73756 0.78857 1.20926 0.98257 0.99463 0.91017 1.20560 1.04112 0.94156 0.99062 1.20578 0.79591 0.82694 0.86906 1.90748 1.39028 1.67189 1.47972 1.45705 1.53247 1.10370 1.25598 1.22511 0.96248 0.92247 0.87901 0.89020 1.23583 0.98377 0.96254 1.00451 1.22948 0.98897 0.93932 1.00456 0.88612 1.22240 0.82065 0.91521 1.02991 1.92740 1.49158 1.85514 1.94892 1.23279 0.95569 0.93094 1.03494 0.92178 0.86855 0.89912 0.85504 0.82539 0.84061 0.88425 0.75508 1.23000 1.21210 0.83729 0.84621 0.73993 0.92556 0.87882 0.88650 0.88790 0.86241 0.89429 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 1.01 9.07 71.98 0.65 1.66 16 2 C 0.06 -0.05 2.64 29.85 0.08 0.03 16 3 O -0.31 -2.37 9.33 -73.42 -0.69 -3.06 16 4 C 0.12 0.64 6.60 22.51 0.15 0.78 16 5 C -0.21 -0.13 8.24 22.37 0.18 0.06 16 6 C -0.06 -0.08 9.60 22.25 0.21 0.14 16 7 C -0.12 -0.32 5.42 -19.85 -0.11 -0.43 16 8 C -0.07 0.05 2.81 71.24 0.20 0.25 16 9 O -0.56 -0.89 12.74 -148.98 -1.90 -2.79 16 10 Si 0.75 -0.82 29.78 68.60 2.04 1.22 16 11 C -0.08 -0.25 8.66 22.25 0.19 -0.05 16 12 C -0.16 -0.89 9.99 22.37 0.22 -0.67 16 13 C 0.52 1.88 7.23 87.66 0.63 2.52 16 14 O -0.57 -8.76 16.10 16.03 0.26 -8.51 16 15 N -0.70 3.27 5.25 -440.05 -2.31 0.96 16 16 C 0.12 -0.33 4.24 45.52 0.19 -0.14 16 17 H 0.09 0.30 7.46 -2.39 -0.02 0.29 16 18 C -0.15 0.44 7.43 31.12 0.23 0.67 16 19 C -0.14 0.75 4.09 -10.27 -0.04 0.71 16 20 H 0.10 -0.28 8.14 -2.39 -0.02 -0.30 16 21 C 0.07 -0.37 7.35 71.98 0.53 0.16 16 22 F -0.24 -0.91 17.36 44.97 0.78 -0.13 16 23 C -0.12 1.05 7.39 31.12 0.23 1.28 16 24 H 0.06 -0.10 8.14 -2.39 -0.02 -0.12 16 25 H 0.11 -1.48 7.57 -2.39 -0.02 -1.50 16 26 H 0.08 -0.49 6.90 -2.39 -0.02 -0.51 16 27 H 0.13 -0.83 6.32 -2.38 -0.02 -0.85 16 28 H 0.16 -0.90 5.43 -2.91 -0.02 -0.91 16 29 H 0.14 -0.25 8.06 -2.91 -0.02 -0.28 16 30 H 0.10 -0.50 7.96 -2.39 -0.02 -0.52 16 31 H 0.39 -2.49 8.74 -74.05 -0.65 -3.14 16 32 H -0.30 -2.06 7.11 99.48 0.71 -1.35 16 33 H -0.29 -0.78 7.11 99.48 0.71 -0.07 16 34 H 0.15 -0.09 4.87 -2.91 -0.01 -0.10 16 35 H 0.14 0.64 8.06 -2.91 -0.02 0.62 16 36 H 0.42 -5.42 8.15 -92.71 -0.76 -6.18 16 37 H 0.06 0.09 8.14 -2.39 -0.02 0.08 16 38 H 0.10 -0.61 7.97 -2.39 -0.02 -0.63 16 39 H 0.10 -0.91 7.95 -2.39 -0.02 -0.93 16 40 H 0.09 -0.83 8.14 -2.39 -0.02 -0.85 16 41 H 0.12 -1.71 8.08 -2.39 -0.02 -1.73 16 42 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 Total: 0.00 -26.53 349.77 1.45 -25.09 By element: Atomic # 1 Polarization: -19.47 SS G_CDS: -0.31 Total: -19.78 kcal Atomic # 6 Polarization: 3.42 SS G_CDS: 3.56 Total: 6.98 kcal Atomic # 7 Polarization: 3.27 SS G_CDS: -2.31 Total: 0.96 kcal Atomic # 8 Polarization: -12.02 SS G_CDS: -2.33 Total: -14.35 kcal Atomic # 9 Polarization: -0.91 SS G_CDS: 0.78 Total: -0.13 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: 2.04 Total: 1.22 kcal Total: -26.53 1.45 -25.09 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_10157680.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.324 kcal (2) G-P(sol) polarization free energy of solvation -26.533 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.857 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.445 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.087 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.412 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds