Wall clock time and date at job start Sun Mar 7 2021 04:45:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86299 * 109.46797 * 2 1 4 4 C 1.50701 * 109.47145 * 119.99176 * 2 1 3 5 5 C 1.38412 * 119.89530 * 245.00614 * 4 2 1 6 6 C 1.38246 * 120.33895 * 180.02562 * 5 4 2 7 7 C 1.38277 * 120.12009 * 359.97438 * 6 5 4 8 8 F 1.35105 * 120.11276 * 180.02562 * 7 6 5 9 9 C 1.39863 * 119.78024 * 359.97438 * 7 6 5 10 10 C 1.47694 * 120.16651 * 179.97438 * 9 7 6 11 11 O 1.21563 * 120.00074 * 359.97438 * 10 9 7 12 12 N 1.34777 * 119.99643 * 179.97438 * 10 9 7 13 13 C 1.46499 * 119.99665 * 179.72383 * 12 10 9 14 14 H 1.09002 * 112.85201 * 24.08188 * 13 12 10 15 15 C 1.53784 * 113.61491 * 155.28109 * 13 12 10 16 16 C 1.53783 * 87.08338 * 139.98310 * 15 13 12 17 17 H 1.08993 * 113.61667 * 89.11182 * 16 15 13 18 18 C 1.53003 * 113.61141 * 219.93857 * 16 15 13 19 19 F 1.39901 * 109.46968 * 185.00038 * 18 16 15 20 20 C 1.53780 * 87.07825 * 334.56565 * 16 15 13 21 21 C 1.37906 * 119.89067 * 65.23976 * 4 2 1 22 22 H 0.96699 * 114.00408 * 299.99770 * 1 2 3 23 23 H 1.08997 * 109.47715 * 239.99789 * 2 1 3 24 24 H 1.48504 * 109.99910 * 299.99504 * 3 2 1 25 25 H 1.48497 * 110.00378 * 61.31720 * 3 2 1 26 26 H 1.07994 * 119.83088 * 359.97438 * 5 4 2 27 27 H 1.08009 * 119.94127 * 179.97438 * 6 5 4 28 28 H 0.97001 * 120.00485 * 0.02562 * 12 10 9 29 29 H 1.09000 * 113.61044 * 254.52540 * 15 13 12 30 30 H 1.09001 * 113.61354 * 25.42535 * 15 13 12 31 31 H 1.09002 * 109.46736 * 304.99496 * 18 16 15 32 32 H 1.08996 * 109.47669 * 64.99156 * 18 16 15 33 33 H 1.08998 * 113.61772 * 270.88604 * 20 16 15 34 34 H 1.09001 * 113.61751 * 139.98662 * 20 16 15 35 35 H 1.08011 * 120.05782 * 359.97438 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7102 1.2306 5 6 2.6393 -0.0089 2.1912 6 6 3.1048 -0.6514 3.3233 7 6 2.8649 -2.0013 3.5032 8 9 3.3195 -2.6289 4.6100 9 6 2.1491 -2.7145 2.5363 10 6 1.8885 -4.1567 2.7195 11 8 2.2968 -4.7268 3.7125 12 7 1.1979 -4.8406 1.7858 13 6 0.9446 -6.2724 1.9646 14 1 0.9726 -6.5799 3.0100 15 6 -0.2942 -6.7782 1.2067 16 6 0.5235 -8.0358 0.8682 17 1 0.4372 -8.8265 1.6134 18 6 0.3094 -8.5398 -0.5605 19 9 1.0004 -9.7431 -0.7389 20 6 1.7814 -7.1670 1.0348 21 6 1.6883 -2.0579 1.3936 22 1 -0.3934 0.4417 0.7650 23 1 1.7924 -0.5138 -0.8899 24 1 1.5614 2.4678 -1.2086 25 1 1.5878 2.4586 1.2242 26 1 2.8297 1.0454 2.0552 27 1 3.6570 -0.0980 4.0686 28 1 0.8724 -4.3858 0.9932 29 1 -1.1505 -6.9749 1.8518 30 1 -0.5492 -6.1753 0.3352 31 1 -0.7545 -8.7028 -0.7326 32 1 0.6823 -7.7984 -1.2671 33 1 2.0939 -6.6704 0.1163 34 1 2.6007 -7.6773 1.5410 35 1 1.1385 -2.6034 0.6408 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_12335834.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:45:53 Heat of formation + Delta-G solvation = -108.266903 kcal Electronic energy + Delta-G solvation = -21979.393997 eV Core-core repulsion = 18194.674048 eV Total energy + Delta-G solvation = -3784.719949 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 284.101 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -50.03189 -48.54431 -41.55475 -40.37249 -39.26682 -37.57120 -35.00175 -32.65150 -32.28399 -29.34875 -26.77637 -26.63328 -25.72825 -23.93883 -22.57305 -21.71833 -20.79041 -19.22537 -18.39870 -18.36053 -17.65272 -17.22077 -16.98383 -16.88227 -16.73895 -16.29165 -16.11479 -15.96538 -15.71752 -15.61906 -15.32513 -14.74745 -14.48363 -14.38821 -13.69837 -13.57515 -13.49183 -13.19565 -12.99075 -12.78650 -12.50253 -12.28174 -12.07388 -11.71780 -11.52470 -11.33801 -11.13769 -10.62209 -10.42525 -10.11678 -9.85437 -4.87493 -0.51569 -0.04190 1.31578 1.57142 1.62842 1.93924 2.01973 2.45168 3.03623 3.32357 3.33227 3.37872 3.45445 3.52586 3.60834 3.63227 3.73533 3.98558 4.08130 4.11322 4.22017 4.27014 4.45977 4.56303 4.61562 4.66945 4.74426 4.77421 4.77887 4.84961 4.93945 4.95390 5.01483 5.12812 5.20521 5.47587 5.58606 6.34435 6.50379 7.02696 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.073 4.073 3 Si 0.759 3.241 4 C -0.130 4.130 5 C -0.053 4.053 6 C -0.153 4.153 7 C 0.132 3.868 8 F -0.138 7.138 9 C -0.189 4.189 10 C 0.553 3.447 11 O -0.574 6.574 12 N -0.697 5.697 13 C 0.114 3.886 14 H 0.093 0.907 15 C -0.118 4.118 16 C -0.141 4.141 17 H 0.097 0.903 18 C 0.067 3.933 19 F -0.241 7.241 20 C -0.147 4.147 21 C -0.022 4.022 22 H 0.388 0.612 23 H 0.138 0.862 24 H -0.305 1.305 25 H -0.278 1.278 26 H 0.166 0.834 27 H 0.165 0.835 28 H 0.417 0.583 29 H 0.087 0.913 30 H 0.117 0.883 31 H 0.095 0.905 32 H 0.094 0.906 33 H 0.102 0.898 34 H 0.057 0.943 35 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.618 5.323 -5.331 7.705 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.183 4.183 3 Si 0.664 3.336 4 C -0.131 4.131 5 C -0.070 4.070 6 C -0.171 4.171 7 C 0.112 3.888 8 F -0.116 7.116 9 C -0.193 4.193 10 C 0.341 3.659 11 O -0.455 6.455 12 N -0.349 5.349 13 C 0.009 3.991 14 H 0.111 0.889 15 C -0.156 4.156 16 C -0.160 4.160 17 H 0.115 0.885 18 C 0.012 3.988 19 F -0.222 7.222 20 C -0.186 4.186 21 C -0.041 4.041 22 H 0.238 0.762 23 H 0.156 0.844 24 H -0.234 1.234 25 H -0.204 1.204 26 H 0.183 0.817 27 H 0.183 0.817 28 H 0.256 0.744 29 H 0.106 0.894 30 H 0.135 0.865 31 H 0.113 0.887 32 H 0.113 0.887 33 H 0.121 0.879 34 H 0.076 0.924 35 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -1.437 5.364 -5.138 7.566 hybrid contribution -0.890 -0.406 0.828 1.281 sum -2.326 4.959 -4.311 6.970 Atomic orbital electron populations 1.86598 1.18010 1.80250 1.50339 1.25142 0.83675 1.11340 0.98119 0.94120 0.90347 0.72363 0.76730 1.20395 1.00572 0.94169 0.97971 1.21419 0.93342 1.01100 0.91170 1.21376 1.03365 0.91398 1.01000 1.18242 0.95592 0.91776 0.83202 1.91560 1.86389 1.82983 1.50688 1.20067 1.06935 0.93793 0.98517 1.18408 0.77927 0.86731 0.82804 1.90839 1.52625 1.71110 1.30901 1.45745 1.55511 1.09999 1.23638 1.22548 0.97675 0.78818 1.00071 0.88856 1.23290 0.96121 0.95054 1.01169 1.22940 0.97615 0.97634 0.97797 0.88461 1.22241 0.97695 0.82225 0.96616 1.92740 1.82641 1.50209 1.96636 1.23593 0.97129 0.97184 1.00644 1.21220 0.94546 0.94169 0.94149 0.76242 0.84392 1.23363 1.20404 0.81735 0.81696 0.74429 0.89416 0.86504 0.88696 0.88742 0.87932 0.92361 0.82113 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 2.77 12.83 -148.98 -1.91 0.86 16 2 C -0.07 0.61 2.80 71.24 0.20 0.81 16 3 Si 0.76 -5.98 29.87 68.60 2.05 -3.93 16 4 C -0.13 0.88 5.34 -19.90 -0.11 0.77 16 5 C -0.05 0.36 8.66 22.31 0.19 0.56 16 6 C -0.15 0.39 10.01 22.28 0.22 0.61 16 7 C 0.13 0.64 7.29 22.67 0.17 0.81 16 8 F -0.14 -1.69 15.55 44.97 0.70 -0.99 16 9 C -0.19 -0.49 5.88 -20.05 -0.12 -0.60 16 10 C 0.55 3.81 7.77 86.74 0.67 4.49 16 11 O -0.57 -9.79 14.94 -3.91 -0.06 -9.84 16 12 N -0.70 0.87 5.31 -443.05 -2.35 -1.48 16 13 C 0.11 -0.07 4.24 45.52 0.19 0.12 16 14 H 0.09 0.47 7.47 -2.39 -0.02 0.46 16 15 C -0.12 0.83 7.39 31.12 0.23 1.06 16 16 C -0.14 0.55 4.09 -10.27 -0.04 0.51 16 17 H 0.10 -0.17 8.14 -2.39 -0.02 -0.19 16 18 C 0.07 -0.29 7.39 71.98 0.53 0.24 16 19 F -0.24 -1.10 17.36 44.97 0.78 -0.32 16 20 C -0.15 0.22 7.43 31.12 0.23 0.45 16 21 C -0.02 0.11 9.17 22.52 0.21 0.31 16 22 H 0.39 -3.86 8.70 -74.06 -0.64 -4.51 16 23 H 0.14 -1.51 7.96 -2.39 -0.02 -1.53 16 24 H -0.31 -0.33 7.11 99.48 0.71 0.37 16 25 H -0.28 1.23 7.00 99.48 0.70 1.92 16 26 H 0.17 -1.93 4.81 -2.91 -0.01 -1.94 16 27 H 0.17 -1.05 8.06 -2.91 -0.02 -1.07 16 28 H 0.42 -3.51 6.76 -92.71 -0.63 -4.14 16 29 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 30 H 0.12 -1.38 8.08 -2.39 -0.02 -1.40 16 31 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 32 H 0.09 -0.77 7.85 -2.39 -0.02 -0.79 16 33 H 0.10 -0.45 7.90 -2.39 -0.02 -0.47 16 34 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 35 H 0.16 -1.63 6.41 -2.90 -0.02 -1.65 16 Total: 0.00 -23.48 304.00 1.69 -21.78 By element: Atomic # 1 Polarization: -16.10 SS G_CDS: -0.09 Total: -16.20 kcal Atomic # 6 Polarization: 7.54 SS G_CDS: 2.58 Total: 10.13 kcal Atomic # 7 Polarization: 0.87 SS G_CDS: -2.35 Total: -1.48 kcal Atomic # 8 Polarization: -7.01 SS G_CDS: -1.97 Total: -8.98 kcal Atomic # 9 Polarization: -2.79 SS G_CDS: 1.48 Total: -1.31 kcal Atomic # 14 Polarization: -5.98 SS G_CDS: 2.05 Total: -3.93 kcal Total: -23.48 1.69 -21.78 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_12335834.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.482 kcal (2) G-P(sol) polarization free energy of solvation -23.480 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.962 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.695 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.785 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.267 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds