Wall clock time and date at job start Sun Mar 7 2021 04:46:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50708 * 1 3 3 C 1.34804 * 125.90520 * 2 1 4 4 C 1.40989 * 107.48464 * 180.02562 * 3 2 1 5 5 C 1.50699 * 126.25748 * 179.97438 * 4 3 2 6 6 O 1.42902 * 109.47014 * 255.02360 * 5 4 3 7 7 Si 1.86305 * 109.47047 * 15.02079 * 5 4 3 8 8 C 1.34810 * 107.48879 * 359.73306 * 4 3 2 9 9 C 1.50693 * 125.90700 * 180.29753 * 8 4 3 10 10 N 1.36651 * 125.89874 * 180.02562 * 2 1 3 11 11 C 1.39672 * 125.68304 * 359.97438 * 10 2 1 12 12 C 1.40206 * 120.15506 * 270.04678 * 11 10 2 13 13 C 1.47573 * 120.18961 * 359.95792 * 12 11 10 14 14 O 1.21590 * 120.00327 * 359.97438 * 13 12 11 15 15 N 1.34784 * 119.99855 * 179.97438 * 13 12 11 16 16 C 1.46496 * 119.99793 * 179.97438 * 15 13 12 17 17 H 1.09003 * 112.85483 * 334.66327 * 16 15 13 18 18 C 1.53781 * 113.61452 * 105.86511 * 16 15 13 19 19 C 1.53959 * 87.01833 * 139.94721 * 18 16 15 20 20 H 1.09003 * 113.53604 * 89.19587 * 19 18 16 21 21 C 1.53007 * 113.74143 * 220.05277 * 19 18 16 22 22 F 1.39895 * 109.47344 * 277.60039 * 21 19 18 23 23 C 1.53779 * 87.11338 * 334.63882 * 19 18 16 24 24 C 1.39655 * 119.61551 * 179.97438 * 12 11 10 25 25 C 1.37830 * 119.91581 * 0.02562 * 24 12 11 26 26 C 1.38537 * 120.31279 * 359.71584 * 25 24 12 27 27 C 1.38068 * 120.38844 * 0.56282 * 26 25 24 28 28 H 1.09002 * 109.46848 * 269.97724 * 1 2 3 29 29 H 1.09000 * 109.46634 * 29.97158 * 1 2 3 30 30 H 1.08993 * 109.47065 * 149.97493 * 1 2 3 31 31 H 1.07996 * 126.25632 * 0.05573 * 3 2 1 32 32 H 1.09001 * 109.47682 * 135.02049 * 5 4 3 33 33 H 0.96696 * 114.00158 * 59.99669 * 6 5 4 34 34 H 1.48502 * 109.99632 * 58.68258 * 7 5 4 35 35 H 1.48499 * 109.99902 * 179.97438 * 7 5 4 36 36 H 1.09001 * 109.47514 * 270.15347 * 9 8 4 37 37 H 1.08999 * 109.47132 * 30.15476 * 9 8 4 38 38 H 1.09004 * 109.47384 * 150.14862 * 9 8 4 39 39 H 0.96996 * 119.99859 * 359.97438 * 15 13 12 40 40 H 1.08996 * 113.61770 * 254.52656 * 18 16 15 41 41 H 1.09005 * 113.61352 * 25.43372 * 18 16 15 42 42 H 1.08994 * 109.46716 * 37.60508 * 21 19 18 43 43 H 1.08999 * 109.46552 * 157.59737 * 21 19 18 44 44 H 1.08999 * 113.61000 * 270.81140 * 23 19 18 45 45 H 1.09002 * 113.68958 * 139.92037 * 23 19 18 46 46 H 1.07997 * 120.04012 * 180.02562 * 24 12 11 47 47 H 1.07999 * 119.84020 * 179.97438 * 25 24 12 48 48 H 1.07996 * 119.80525 * 180.30182 * 26 25 24 49 49 H 1.08002 * 119.96388 * 179.72398 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2976 1.0919 0.0000 4 6 3.6353 0.6464 -0.0006 5 6 4.8649 1.5177 -0.0014 6 8 5.4541 1.5088 -1.3032 7 14 4.3909 3.2610 0.4538 8 6 3.6134 -0.7015 0.0050 9 6 4.8194 -1.6050 0.0129 10 7 2.3083 -1.1069 -0.0005 11 6 1.8670 -2.4321 -0.0006 12 6 1.6440 -3.1003 1.2117 13 6 1.8751 -2.4077 2.4942 14 8 2.2604 -1.2545 2.5016 15 7 1.6589 -3.0535 3.6573 16 6 1.8889 -2.3662 4.9304 17 1 2.6133 -1.5558 4.8492 18 6 0.5940 -1.9646 5.6563 19 6 1.2903 -2.3874 6.9627 20 1 1.8501 -1.5818 7.4380 21 6 0.3732 -3.1290 7.9374 22 9 -0.3760 -2.2020 8.6699 23 6 2.1614 -3.3205 6.1052 24 6 1.2023 -4.4251 1.1985 25 6 0.9892 -5.0666 -0.0027 26 6 1.2054 -4.4016 -1.1986 27 6 1.6476 -3.0937 -1.2004 28 1 -0.3633 -0.0004 1.0277 29 1 -0.3632 0.8903 -0.5134 30 1 -0.3633 -0.8897 -0.5142 31 1 1.9668 2.1199 0.0008 32 1 5.5820 1.1348 0.7247 33 1 4.8711 1.8374 -2.0011 34 1 3.7480 3.2794 1.7923 35 1 5.5949 4.1302 0.4572 36 1 5.1153 -1.8250 -1.0128 37 1 5.6412 -1.1095 0.5298 38 1 4.5741 -2.5340 0.5276 39 1 1.3512 -3.9734 3.6514 40 1 0.3758 -0.8981 5.6021 41 1 -0.2628 -2.5867 5.3971 42 1 -0.2994 -3.7801 7.3793 43 1 0.9766 -3.7284 8.6192 44 1 1.7339 -4.3138 5.9690 45 1 3.2070 -3.3480 6.4119 46 1 1.0279 -4.9461 2.1282 47 1 0.6480 -6.0913 -0.0115 48 1 1.0312 -4.9107 -2.1350 49 1 1.8182 -2.5833 -2.1368 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_12335856.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:46:09 Heat of formation + Delta-G solvation = -7.593554 kcal Electronic energy + Delta-G solvation = -33118.532388 eV Core-core repulsion = 28735.377130 eV Total energy + Delta-G solvation = -4383.155258 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -48.55670 -42.74859 -41.26297 -40.10335 -38.91448 -37.44944 -34.97855 -34.05956 -33.39933 -32.47588 -30.41326 -29.96906 -29.43226 -27.05060 -26.93654 -25.49399 -24.50177 -23.85253 -23.16070 -21.69184 -21.14926 -20.73223 -20.11813 -18.88876 -17.88067 -17.65405 -17.24732 -17.16345 -16.85565 -16.76159 -16.51154 -16.07031 -15.89369 -15.79008 -15.67265 -15.41856 -14.99595 -14.79681 -14.63942 -14.49536 -14.16683 -13.99835 -13.82414 -13.71440 -13.69851 -13.46283 -13.33275 -13.19181 -13.09180 -12.97245 -12.88330 -12.61578 -12.55432 -12.42163 -12.14233 -11.77853 -11.69101 -11.51349 -11.39922 -10.88112 -10.37015 -10.27286 -10.09306 -10.00743 -9.32831 -8.44149 -4.73438 -0.50889 -0.10841 1.41535 1.67643 1.71754 1.92723 1.96471 2.04861 2.20552 2.30090 2.50700 3.17029 3.22781 3.37656 3.44728 3.49230 3.61899 3.70412 3.84698 3.88384 3.91058 3.99987 4.01480 4.04836 4.07755 4.22337 4.32485 4.41485 4.43753 4.45850 4.50650 4.52849 4.56064 4.58371 4.70546 4.75637 4.77237 4.80176 4.85969 4.88477 4.90109 4.98070 5.01264 5.07987 5.09746 5.12504 5.15102 5.39004 5.43940 5.45737 5.66948 6.34101 6.34475 6.48094 6.76745 6.93164 7.12803 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 C 0.043 3.957 3 C -0.184 4.184 4 C -0.194 4.194 5 C -0.029 4.029 6 O -0.548 6.548 7 Si 0.694 3.306 8 C 0.071 3.929 9 C -0.080 4.080 10 N -0.396 5.396 11 C 0.173 3.827 12 C -0.128 4.128 13 C 0.550 3.450 14 O -0.500 6.500 15 N -0.718 5.718 16 C 0.127 3.873 17 H 0.118 0.882 18 C -0.145 4.145 19 C -0.144 4.144 20 H 0.107 0.893 21 C 0.074 3.926 22 F -0.216 7.216 23 C -0.137 4.137 24 C -0.082 4.082 25 C -0.114 4.114 26 C -0.083 4.083 27 C -0.112 4.112 28 H 0.067 0.933 29 H 0.081 0.919 30 H 0.058 0.942 31 H 0.140 0.860 32 H 0.101 0.899 33 H 0.375 0.625 34 H -0.260 1.260 35 H -0.263 1.263 36 H 0.072 0.928 37 H 0.077 0.923 38 H 0.053 0.947 39 H 0.398 0.602 40 H 0.078 0.922 41 H 0.087 0.913 42 H 0.075 0.925 43 H 0.077 0.923 44 H 0.090 0.910 45 H 0.082 0.918 46 H 0.133 0.867 47 H 0.138 0.862 48 H 0.139 0.861 49 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.569 -6.882 -1.886 7.979 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.065 4.065 3 C -0.208 4.208 4 C -0.201 4.201 5 C -0.141 4.141 6 O -0.353 6.353 7 Si 0.597 3.403 8 C -0.038 4.038 9 C -0.137 4.137 10 N -0.071 5.071 11 C 0.082 3.918 12 C -0.132 4.132 13 C 0.336 3.664 14 O -0.374 6.374 15 N -0.371 5.371 16 C 0.023 3.977 17 H 0.136 0.864 18 C -0.184 4.184 19 C -0.163 4.163 20 H 0.125 0.875 21 C 0.019 3.981 22 F -0.197 7.197 23 C -0.175 4.175 24 C -0.101 4.101 25 C -0.132 4.132 26 C -0.102 4.102 27 C -0.131 4.131 28 H 0.086 0.914 29 H 0.100 0.900 30 H 0.077 0.923 31 H 0.158 0.842 32 H 0.119 0.881 33 H 0.222 0.778 34 H -0.185 1.185 35 H -0.189 1.189 36 H 0.090 0.910 37 H 0.096 0.904 38 H 0.072 0.928 39 H 0.234 0.766 40 H 0.096 0.904 41 H 0.106 0.894 42 H 0.093 0.907 43 H 0.095 0.905 44 H 0.109 0.891 45 H 0.101 0.899 46 H 0.151 0.849 47 H 0.156 0.844 48 H 0.157 0.843 49 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -2.791 -5.874 -0.949 6.573 hybrid contribution -0.141 -1.228 0.394 1.297 sum -2.932 -7.102 -0.556 7.704 Atomic orbital electron populations 1.20281 0.88527 1.02826 1.02404 1.20098 0.92848 0.84739 1.08779 1.20379 0.91847 0.97105 1.11475 1.19428 0.94579 0.92521 1.13555 1.24271 0.93818 1.08046 0.87952 1.86447 1.43405 1.88755 1.16692 0.94769 0.83154 0.76985 0.85387 1.19951 0.83340 0.93694 1.06814 1.20242 0.93800 0.97299 1.02371 1.40947 1.05643 1.02095 1.58416 1.17516 0.98061 0.84038 0.92192 1.20234 1.04687 0.95154 0.93136 1.18151 0.78197 0.86546 0.83522 1.90935 1.43470 1.15921 1.87093 1.45882 1.69266 1.16621 1.05304 1.22478 0.98279 0.96296 0.80688 0.86442 1.23563 0.97607 1.02963 0.94247 1.23038 0.98147 0.99982 0.95139 0.87518 1.21952 0.93128 0.89613 0.93409 1.92789 1.78611 1.68935 1.79364 1.23319 1.01134 0.98281 0.94786 1.21271 0.97070 0.92649 0.99118 1.21286 0.99261 1.00736 0.91876 1.21354 0.96072 0.93650 0.99100 1.21394 0.99217 0.95211 0.97302 0.91426 0.89992 0.92343 0.84235 0.88122 0.77779 1.18470 1.18854 0.90982 0.90382 0.92757 0.76624 0.90366 0.89436 0.90721 0.90481 0.89149 0.89912 0.84929 0.84435 0.84316 0.84403 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.10 10.09 36.01 0.36 0.26 16 2 C 0.04 0.15 6.00 -81.66 -0.49 -0.34 16 3 C -0.18 -0.66 9.27 -39.76 -0.37 -1.03 16 4 C -0.19 -0.81 5.35 -104.80 -0.56 -1.37 16 5 C -0.03 -0.10 2.61 36.00 0.09 0.00 16 6 O -0.55 -1.61 12.88 -35.23 -0.45 -2.07 16 7 Si 0.69 1.59 30.81 -169.99 -5.24 -3.65 16 8 C 0.07 0.31 5.98 -81.66 -0.49 -0.18 16 9 C -0.08 -0.23 9.87 36.00 0.36 0.12 16 10 N -0.40 -1.37 1.45 -52.35 -0.08 -1.45 16 11 C 0.17 0.29 4.52 -83.35 -0.38 -0.09 16 12 C -0.13 -0.10 5.89 -104.82 -0.62 -0.71 16 13 C 0.55 1.21 7.77 -12.45 -0.10 1.11 16 14 O -0.50 -2.98 13.29 5.29 0.07 -2.91 16 15 N -0.72 0.69 5.31 -54.04 -0.29 0.41 16 16 C 0.13 -0.10 4.21 -67.12 -0.28 -0.38 16 17 H 0.12 0.18 7.50 -51.93 -0.39 -0.21 16 18 C -0.15 0.13 7.45 -25.83 -0.19 -0.06 16 19 C -0.14 0.26 4.09 -89.71 -0.37 -0.11 16 20 H 0.11 -0.13 8.14 -51.93 -0.42 -0.55 16 21 C 0.07 -0.12 7.36 37.16 0.27 0.15 16 22 F -0.22 -0.49 17.36 2.25 0.04 -0.45 16 23 C -0.14 0.41 7.39 -25.92 -0.19 0.22 16 24 C -0.08 0.19 9.54 -39.20 -0.37 -0.18 16 25 C -0.11 0.35 10.02 -39.62 -0.40 -0.05 16 26 C -0.08 0.20 10.03 -39.53 -0.40 -0.19 16 27 C -0.11 0.04 9.96 -39.45 -0.39 -0.35 16 28 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 29 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 30 H 0.06 0.04 7.83 -51.93 -0.41 -0.37 16 31 H 0.14 0.22 6.59 -52.49 -0.35 -0.13 16 32 H 0.10 0.42 7.49 -51.93 -0.39 0.03 16 33 H 0.38 -0.28 8.70 45.56 0.40 0.12 16 34 H -0.26 -1.44 7.11 56.52 0.40 -1.03 16 35 H -0.26 -1.30 7.11 56.52 0.40 -0.90 16 36 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 37 H 0.08 0.24 7.49 -51.93 -0.39 -0.15 16 38 H 0.05 0.15 7.83 -51.93 -0.41 -0.26 16 39 H 0.40 -1.51 6.74 -40.82 -0.28 -1.78 16 40 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 41 H 0.09 -0.14 7.98 -51.93 -0.41 -0.55 16 42 H 0.07 -0.23 7.96 -51.93 -0.41 -0.65 16 43 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 44 H 0.09 -0.42 8.07 -51.93 -0.42 -0.83 16 45 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 46 H 0.13 -0.68 6.40 -52.49 -0.34 -1.01 16 47 H 0.14 -0.74 8.06 -52.49 -0.42 -1.16 16 48 H 0.14 -0.64 8.06 -52.49 -0.42 -1.06 16 49 H 0.14 -0.12 8.06 -52.49 -0.42 -0.55 16 LS Contribution 404.46 15.07 6.10 6.10 Total: 0.00 -9.39 404.46 -11.57 -20.96 By element: Atomic # 1 Polarization: -6.55 SS G_CDS: -7.21 Total: -13.76 kcal Atomic # 6 Polarization: 1.33 SS G_CDS: -4.51 Total: -3.18 kcal Atomic # 7 Polarization: -0.68 SS G_CDS: -0.36 Total: -1.04 kcal Atomic # 8 Polarization: -4.60 SS G_CDS: -0.38 Total: -4.98 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.04 Total: -0.45 kcal Atomic # 14 Polarization: 1.59 SS G_CDS: -5.24 Total: -3.65 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -9.39 -11.57 -20.96 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_12335856.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.367 kcal (2) G-P(sol) polarization free energy of solvation -9.391 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.977 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.570 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.961 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.594 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds