Wall clock time and date at job start Sun Mar 7 2021 04:46:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86301 * 109.47259 * 2 1 4 4 C 1.50697 * 109.46996 * 120.00351 * 2 1 3 5 5 C 1.38411 * 119.82410 * 244.72358 * 4 2 1 6 6 C 1.37888 * 120.16740 * 179.76620 * 5 4 2 7 7 C 1.39840 * 119.82726 * 0.50390 * 6 5 4 8 8 C 1.47213 * 120.17015 * 179.72584 * 7 6 5 9 9 C 1.34810 * 119.99715 * 0.02659 * 8 7 6 10 10 C 1.46424 * 119.99798 * 180.02562 * 9 8 7 11 11 O 1.21704 * 120.00231 * 0.02562 * 10 9 8 12 12 N 1.34778 * 120.00102 * 179.97438 * 10 9 8 13 13 C 1.46494 * 119.99871 * 179.97438 * 12 10 9 14 14 H 1.09003 * 112.85543 * 334.66773 * 13 12 10 15 15 C 1.53790 * 113.61679 * 105.86519 * 13 12 10 16 16 C 1.53947 * 87.02081 * 139.94829 * 15 13 12 17 17 H 1.09003 * 113.61656 * 89.20118 * 16 15 13 18 18 C 1.53002 * 113.66913 * 220.06878 * 16 15 13 19 19 F 1.39899 * 109.47402 * 162.56208 * 18 16 15 20 20 C 1.53779 * 87.11541 * 334.63848 * 16 15 13 21 21 C 1.39833 * 119.66079 * 359.74671 * 7 6 5 22 22 C 1.37889 * 119.82578 * 0.02562 * 21 7 6 23 23 H 0.96696 * 114.00036 * 299.99991 * 1 2 3 24 24 H 1.09001 * 109.47103 * 239.99639 * 2 1 3 25 25 H 1.48497 * 109.99842 * 299.99834 * 3 2 1 26 26 H 1.48498 * 109.99736 * 61.31824 * 3 2 1 27 27 H 1.07991 * 119.91389 * 0.02562 * 5 4 2 28 28 H 1.07999 * 120.08780 * 180.23776 * 6 5 4 29 29 H 1.07997 * 119.99660 * 180.02562 * 8 7 6 30 30 H 1.07993 * 120.00213 * 359.97438 * 9 8 7 31 31 H 0.96995 * 120.00136 * 359.97438 * 12 10 9 32 32 H 1.08997 * 113.61496 * 254.53301 * 15 13 12 33 33 H 1.09000 * 113.61033 * 25.43143 * 15 13 12 34 34 H 1.09007 * 109.47034 * 282.56017 * 18 16 15 35 35 H 1.08998 * 109.46861 * 42.56239 * 18 16 15 36 36 H 1.08996 * 113.61398 * 270.81241 * 20 16 15 37 37 H 1.09001 * 113.61936 * 139.90547 * 20 16 15 38 38 H 1.08002 * 120.08940 * 180.02562 * 21 7 6 39 39 H 1.08004 * 119.91519 * 180.02562 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6442 -0.0092 2.1874 6 6 3.1030 -0.6512 3.3182 7 6 2.8554 -2.0165 3.4917 8 6 3.3469 -2.7107 4.6932 9 6 4.0372 -2.0300 5.6300 10 6 4.5265 -2.7206 6.8248 11 8 4.3106 -3.9092 6.9720 12 7 5.2170 -2.0401 7.7611 13 6 5.7061 -2.7310 8.9568 14 1 5.1183 -3.6147 9.2054 15 6 7.2231 -2.9835 8.9452 16 6 7.2140 -2.6197 10.4410 17 1 7.0399 -3.4727 11.0969 18 6 8.4118 -1.7720 10.8743 19 9 8.1335 -1.1654 12.1038 20 6 5.9480 -1.7955 10.1532 21 6 2.1390 -2.7191 2.5178 22 6 1.6828 -2.0620 1.3947 23 1 -0.3933 0.4417 0.7650 24 1 1.7924 -0.5139 -0.8900 25 1 1.5616 2.4678 -1.2085 26 1 1.5880 2.4585 1.2242 27 1 2.8379 1.0442 2.0501 28 1 3.6557 -0.1019 4.0660 29 1 3.1545 -3.7653 4.8241 30 1 4.2299 -0.9755 5.4988 31 1 5.3901 -1.0931 7.6434 32 1 7.4915 -4.0216 8.7489 33 1 7.7785 -2.2777 8.3276 34 1 9.2907 -2.4090 10.9740 35 1 8.6030 -1.0036 10.1251 36 1 6.1542 -0.7643 9.8664 37 1 5.1884 -1.8759 10.9308 38 1 1.9435 -3.7737 2.6449 39 1 1.1289 -2.6032 0.6418 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_12360594.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:46:22 Heat of formation + Delta-G solvation = -54.218227 kcal Electronic energy + Delta-G solvation = -21626.280054 eV Core-core repulsion = 18029.594048 eV Total energy + Delta-G solvation = -3596.686006 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 292.126 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -48.53741 -41.20415 -40.68229 -39.37899 -37.92728 -35.11472 -34.65025 -32.30960 -31.38990 -29.54697 -27.23854 -26.85474 -24.79371 -24.10404 -23.01601 -21.86623 -21.19107 -20.22783 -18.93114 -18.16151 -17.77573 -17.19088 -16.93161 -16.77973 -16.65376 -16.28379 -16.08593 -15.93996 -15.58826 -15.43185 -15.18421 -14.69209 -14.63235 -14.13988 -13.92312 -13.66271 -13.42501 -13.32233 -13.12022 -13.06289 -12.66797 -12.33088 -12.14072 -11.92494 -11.66021 -11.63301 -11.43740 -11.37721 -10.90159 -10.67092 -10.09822 -10.07976 -9.33212 -5.03553 -0.61085 0.29055 0.85643 1.20309 1.51525 1.89614 2.14704 2.24207 2.72831 3.22810 3.28587 3.29209 3.44874 3.52394 3.57849 3.66759 3.72306 3.79689 3.92230 4.01548 4.06433 4.08663 4.17861 4.23377 4.35003 4.47724 4.50551 4.55762 4.65421 4.71987 4.74752 4.86184 4.86903 4.91434 4.99871 5.06013 5.15298 5.29104 5.38469 5.49412 5.52915 5.79434 6.31976 6.47338 7.21751 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.078 4.078 3 Si 0.687 3.313 4 C -0.105 4.105 5 C -0.120 4.120 6 C -0.096 4.096 7 C -0.073 4.073 8 C -0.015 4.015 9 C -0.216 4.216 10 C 0.549 3.451 11 O -0.543 6.543 12 N -0.717 5.717 13 C 0.124 3.876 14 H 0.118 0.882 15 C -0.143 4.143 16 C -0.145 4.145 17 H 0.106 0.894 18 C 0.073 3.927 19 F -0.216 7.216 20 C -0.138 4.138 21 C -0.092 4.092 22 C -0.094 4.094 23 H 0.376 0.624 24 H 0.120 0.880 25 H -0.257 1.257 26 H -0.260 1.260 27 H 0.130 0.870 28 H 0.131 0.869 29 H 0.138 0.862 30 H 0.131 0.869 31 H 0.402 0.598 32 H 0.079 0.921 33 H 0.089 0.911 34 H 0.077 0.923 35 H 0.075 0.925 36 H 0.089 0.911 37 H 0.080 0.920 38 H 0.132 0.868 39 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.237 2.811 -1.039 4.412 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.188 4.188 3 Si 0.588 3.412 4 C -0.106 4.106 5 C -0.138 4.138 6 C -0.114 4.114 7 C -0.073 4.073 8 C -0.034 4.034 9 C -0.236 4.236 10 C 0.338 3.662 11 O -0.422 6.422 12 N -0.367 5.367 13 C 0.019 3.981 14 H 0.135 0.865 15 C -0.182 4.182 16 C -0.164 4.164 17 H 0.124 0.876 18 C 0.018 3.982 19 F -0.197 7.197 20 C -0.176 4.176 21 C -0.110 4.110 22 C -0.112 4.112 23 H 0.224 0.776 24 H 0.138 0.862 25 H -0.182 1.182 26 H -0.185 1.185 27 H 0.148 0.852 28 H 0.149 0.851 29 H 0.156 0.844 30 H 0.148 0.852 31 H 0.237 0.763 32 H 0.098 0.902 33 H 0.108 0.892 34 H 0.095 0.905 35 H 0.093 0.907 36 H 0.108 0.892 37 H 0.099 0.901 38 H 0.150 0.850 39 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 2.951 2.508 -1.451 4.136 hybrid contribution -0.935 0.324 0.586 1.150 sum 2.016 2.832 -0.865 3.582 Atomic orbital electron populations 1.86618 1.17544 1.79968 1.49328 1.25083 0.84094 1.11134 0.98462 0.94964 0.91605 0.74387 0.80239 1.20464 0.98637 0.94919 0.96559 1.21000 0.98782 0.99823 0.94189 1.21353 0.98965 0.93620 0.97415 1.19073 0.99726 0.93626 0.94846 1.22422 0.90764 1.00031 0.90206 1.22898 1.04291 1.00865 0.95568 1.18387 0.77602 0.86841 0.83359 1.90837 1.57668 1.15296 1.78357 1.45863 1.56539 1.13131 1.21191 1.22498 0.94385 0.97073 0.84175 0.86456 1.23479 0.96895 1.03124 0.94658 1.23033 0.95594 0.99950 0.97843 0.87621 1.21942 0.97925 0.96205 0.82131 1.92784 1.95317 1.85242 1.46403 1.23354 0.97672 0.98890 0.97723 1.21471 0.96239 1.00212 0.93094 1.21008 0.98791 0.93712 0.97717 0.77593 0.86234 1.18155 1.18492 0.85215 0.85080 0.84447 0.85170 0.76292 0.90227 0.89243 0.90484 0.90715 0.89217 0.90094 0.85026 0.85162 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.38 12.83 -35.23 -0.45 -0.83 16 2 C -0.08 0.07 2.80 36.00 0.10 0.17 16 3 Si 0.69 -1.13 29.86 -169.99 -5.08 -6.21 16 4 C -0.11 0.07 5.36 -104.50 -0.56 -0.49 16 5 C -0.12 0.16 8.65 -39.65 -0.34 -0.18 16 6 C -0.10 0.13 9.41 -39.11 -0.37 -0.24 16 7 C -0.07 0.02 5.87 -105.06 -0.62 -0.59 16 8 C -0.01 0.00 9.46 -37.15 -0.35 -0.35 16 9 C -0.22 0.15 9.41 -37.50 -0.35 -0.20 16 10 C 0.55 0.84 7.74 -12.96 -0.10 0.74 16 11 O -0.54 -3.06 15.85 5.19 0.08 -2.98 16 12 N -0.72 0.85 5.36 -54.40 -0.29 0.56 16 13 C 0.12 -0.11 4.21 -67.11 -0.28 -0.39 16 14 H 0.12 0.11 7.50 -51.93 -0.39 -0.27 16 15 C -0.14 0.28 7.45 -25.83 -0.19 0.09 16 16 C -0.14 0.29 4.11 -89.72 -0.37 -0.08 16 17 H 0.11 -0.20 8.14 -51.93 -0.42 -0.62 16 18 C 0.07 -0.13 7.33 37.16 0.27 0.14 16 19 F -0.22 -0.37 17.30 2.25 0.04 -0.33 16 20 C -0.14 0.28 7.34 -25.92 -0.19 0.09 16 21 C -0.09 0.03 9.80 -39.11 -0.38 -0.35 16 22 C -0.09 0.02 9.66 -39.65 -0.38 -0.36 16 23 H 0.38 -0.77 8.70 45.56 0.40 -0.37 16 24 H 0.12 -0.19 7.96 -51.93 -0.41 -0.60 16 25 H -0.26 -0.48 7.11 56.52 0.40 -0.07 16 26 H -0.26 -0.03 7.01 56.52 0.40 0.36 16 27 H 0.13 -0.38 4.81 -52.49 -0.25 -0.64 16 28 H 0.13 -0.46 6.17 -52.49 -0.32 -0.79 16 29 H 0.14 0.10 7.52 -52.49 -0.39 -0.30 16 30 H 0.13 -0.46 6.07 -52.49 -0.32 -0.78 16 31 H 0.40 -1.61 8.69 -40.82 -0.35 -1.96 16 32 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 33 H 0.09 -0.25 8.04 -51.93 -0.42 -0.67 16 34 H 0.08 -0.22 8.14 -51.92 -0.42 -0.64 16 35 H 0.07 -0.24 8.06 -51.93 -0.42 -0.66 16 36 H 0.09 -0.27 8.07 -51.93 -0.42 -0.68 16 37 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 38 H 0.13 -0.23 8.06 -52.49 -0.42 -0.65 16 39 H 0.13 -0.11 8.06 -52.48 -0.42 -0.53 16 LS Contribution 334.20 15.07 5.04 5.04 Total: 0.00 -7.90 334.20 -9.83 -17.72 By element: Atomic # 1 Polarization: -5.90 SS G_CDS: -5.05 Total: -10.95 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -4.12 Total: -2.02 kcal Atomic # 7 Polarization: 0.85 SS G_CDS: -0.29 Total: 0.56 kcal Atomic # 8 Polarization: -3.45 SS G_CDS: -0.37 Total: -3.82 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.04 Total: -0.33 kcal Atomic # 14 Polarization: -1.13 SS G_CDS: -5.08 Total: -6.21 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -7.90 -9.83 -17.72 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_12360594.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.495 kcal (2) G-P(sol) polarization free energy of solvation -7.896 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.391 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.827 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.723 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.218 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds