Wall clock time and date at job start Sun Mar 7 2021 04:46:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86305 * 109.46903 * 2 1 4 4 C 1.50702 * 109.47211 * 240.00200 * 2 1 3 5 5 C 1.35080 * 126.07695 * 105.25378 * 4 2 1 6 6 N 1.35043 * 107.98207 * 179.97438 * 5 4 2 7 7 C 1.46490 * 125.93078 * 179.97438 * 6 5 4 8 8 C 1.50696 * 109.47279 * 125.00235 * 7 6 5 9 9 O 1.21285 * 119.99706 * 359.97438 * 8 7 6 10 10 N 1.34774 * 120.00394 * 179.97438 * 8 7 6 11 11 C 1.46504 * 120.00331 * 179.97438 * 10 8 7 12 12 H 1.09001 * 112.84726 * 23.80568 * 11 10 8 13 13 C 1.53784 * 113.61086 * 154.99599 * 11 10 8 14 14 C 1.53789 * 87.07702 * 139.98573 * 13 11 10 15 15 H 1.09000 * 113.61531 * 89.11187 * 14 13 11 16 16 C 1.53000 * 113.61357 * 219.93360 * 14 13 11 17 17 F 1.39900 * 109.47033 * 184.99494 * 16 14 13 18 18 C 1.53771 * 113.61580 * 252.49490 * 11 10 8 19 19 N 1.40071 * 108.13247 * 359.78732 * 6 5 4 20 20 C 1.31627 * 108.11058 * 0.35878 * 19 6 5 21 21 C 1.48422 * 126.03449 * 179.91111 * 20 19 6 22 22 C 1.39325 * 120.11732 * 136.83626 * 21 20 19 23 23 C 1.38019 * 119.87823 * 180.02562 * 22 21 20 24 24 C 1.38315 * 120.12162 * 0.02562 * 23 22 21 25 25 C 1.38321 * 120.23809 * 0.02562 * 24 23 22 26 26 C 1.38020 * 120.12335 * 359.97438 * 25 24 23 27 27 H 0.96703 * 114.00280 * 299.99774 * 1 2 3 28 28 H 1.08996 * 109.47155 * 119.99803 * 2 1 3 29 29 H 1.48502 * 110.00111 * 299.99852 * 3 2 1 30 30 H 1.48497 * 109.99988 * 61.31916 * 3 2 1 31 31 H 1.08005 * 126.00972 * 359.95453 * 5 4 2 32 32 H 1.09005 * 109.46964 * 244.99608 * 7 6 5 33 33 H 1.09003 * 109.47497 * 4.99818 * 7 6 5 34 34 H 0.97004 * 119.99773 * 359.97438 * 10 8 7 35 35 H 1.08997 * 113.61325 * 254.52967 * 13 11 10 36 36 H 1.08995 * 113.61519 * 25.44037 * 13 11 10 37 37 H 1.08996 * 109.47200 * 305.00155 * 16 14 13 38 38 H 1.09001 * 109.46810 * 64.99982 * 16 14 13 39 39 H 1.09005 * 113.61751 * 334.56920 * 18 11 10 40 40 H 1.09008 * 113.61343 * 105.46980 * 18 11 10 41 41 H 1.08008 * 120.05959 * 0.04153 * 22 21 20 42 42 H 1.08002 * 119.93824 * 180.27462 * 23 22 21 43 43 H 1.07994 * 119.88085 * 180.02562 * 24 23 22 44 44 H 1.08005 * 119.93963 * 179.97438 * 25 24 23 45 45 H 1.07998 * 120.06345 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4673 -0.1253 -2.3237 6 7 2.7917 -1.0992 -3.2011 7 6 3.4000 -0.9013 -4.5189 8 6 4.6638 -1.7163 -4.6164 9 8 5.0214 -2.3953 -3.6771 10 7 5.3967 -1.6908 -5.7471 11 6 6.6257 -2.4827 -5.8416 12 1 6.6358 -3.3315 -5.1578 13 6 7.0130 -2.8490 -7.2841 14 6 8.4705 -2.5713 -6.8797 15 1 8.9864 -3.4440 -6.4793 16 6 9.2783 -1.8463 -7.9581 17 9 10.6119 -1.7397 -7.5491 18 6 7.9088 -1.6365 -5.7954 19 7 2.4494 -2.3318 -2.6304 20 6 1.9259 -2.1024 -1.4447 21 6 1.4245 -3.1297 -0.4981 22 6 1.7210 -3.0332 0.8598 23 6 1.2527 -3.9916 1.7357 24 6 0.4907 -5.0466 1.2675 25 6 0.1942 -5.1479 -0.0798 26 6 0.6574 -4.1951 -0.9644 27 1 -0.3934 0.4417 0.7651 28 1 1.7923 -0.5138 0.8900 29 1 1.5614 2.4680 -1.2085 30 1 1.5878 2.4586 1.2242 31 1 2.6108 0.9351 -2.4704 32 1 2.7017 -1.2199 -5.2930 33 1 3.6368 0.1540 -4.6551 34 1 5.1105 -1.1480 -6.4984 35 1 6.8210 -3.8918 -7.5363 36 1 6.6268 -2.1541 -8.0297 37 1 9.2278 -2.4095 -8.8899 38 1 8.8650 -0.8497 -8.1131 39 1 7.7675 -0.6101 -6.1340 40 1 8.4401 -1.7006 -4.8457 41 1 2.3162 -2.2098 1.2265 42 1 1.4783 -3.9153 2.7891 43 1 0.1258 -5.7941 1.9563 44 1 -0.4009 -5.9740 -0.4402 45 1 0.4257 -4.2753 -2.0162 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_12622748.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:46:31 Heat of formation + Delta-G solvation = 20.977259 kcal Electronic energy + Delta-G solvation = -29344.120419 eV Core-core repulsion = 25052.315793 eV Total energy + Delta-G solvation = -4291.804626 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.148 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -48.53966 -42.49838 -41.13115 -39.85750 -39.33185 -37.77547 -34.94881 -34.63524 -32.41913 -31.96846 -31.49032 -29.72263 -28.42448 -26.74506 -26.01345 -24.52223 -23.51834 -23.23067 -21.81291 -21.56466 -21.03585 -20.60334 -18.56470 -18.42373 -18.26178 -17.77099 -17.28141 -16.90441 -16.81847 -16.60321 -16.24376 -16.10916 -15.88310 -15.67875 -15.53239 -15.29753 -15.07546 -14.72741 -14.41067 -14.31664 -14.23058 -13.91482 -13.65995 -13.57758 -13.46253 -13.29645 -12.90082 -12.70298 -12.48523 -12.35008 -12.18696 -12.05137 -11.99110 -11.57198 -11.50697 -11.31790 -11.18083 -10.62686 -10.24846 -10.10498 -9.88649 -9.80509 -9.31584 -4.86254 0.10348 0.45131 0.79033 1.25524 1.38663 1.46484 1.63375 1.65904 1.97978 2.10408 2.87453 3.27938 3.36176 3.41397 3.54260 3.60219 3.68059 3.73886 3.78463 3.91187 3.95266 4.04857 4.11215 4.11680 4.13534 4.22965 4.24693 4.28904 4.35454 4.52001 4.55904 4.58041 4.69725 4.74825 4.77561 4.81284 4.87056 4.97533 4.99131 5.03781 5.10043 5.24315 5.27723 5.52493 5.55206 5.55991 5.59635 5.88499 6.02578 6.47287 6.56680 6.70367 7.17244 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.054 4.054 3 Si 0.768 3.232 4 C -0.226 4.226 5 C 0.073 3.927 6 N -0.360 5.360 7 C 0.109 3.891 8 C 0.496 3.504 9 O -0.565 6.565 10 N -0.700 5.700 11 C 0.118 3.882 12 H 0.084 0.916 13 C -0.119 4.119 14 C -0.144 4.144 15 H 0.092 0.908 16 C 0.067 3.933 17 F -0.242 7.242 18 C -0.143 4.143 19 N -0.293 5.293 20 C 0.108 3.892 21 C -0.027 4.027 22 C -0.106 4.106 23 C -0.122 4.122 24 C -0.119 4.119 25 C -0.127 4.127 26 C -0.115 4.115 27 H 0.389 0.611 28 H 0.077 0.923 29 H -0.275 1.275 30 H -0.285 1.285 31 H 0.215 0.785 32 H 0.141 0.859 33 H 0.179 0.821 34 H 0.423 0.577 35 H 0.081 0.919 36 H 0.120 0.880 37 H 0.093 0.907 38 H 0.097 0.903 39 H 0.107 0.893 40 H 0.054 0.946 41 H 0.136 0.864 42 H 0.151 0.849 43 H 0.148 0.852 44 H 0.141 0.859 45 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.268 5.462 -4.267 6.936 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.162 4.162 3 Si 0.670 3.330 4 C -0.237 4.237 5 C -0.072 4.072 6 N -0.141 5.141 7 C -0.015 4.015 8 C 0.282 3.718 9 O -0.443 6.443 10 N -0.354 5.354 11 C 0.013 3.987 12 H 0.102 0.898 13 C -0.157 4.157 14 C -0.164 4.164 15 H 0.110 0.890 16 C 0.012 3.988 17 F -0.223 7.223 18 C -0.182 4.182 19 N -0.114 5.114 20 C -0.057 4.057 21 C -0.029 4.029 22 C -0.125 4.125 23 C -0.139 4.139 24 C -0.137 4.137 25 C -0.145 4.145 26 C -0.134 4.134 27 H 0.239 0.761 28 H 0.095 0.905 29 H -0.201 1.201 30 H -0.212 1.212 31 H 0.232 0.768 32 H 0.158 0.842 33 H 0.196 0.804 34 H 0.261 0.739 35 H 0.100 0.900 36 H 0.138 0.862 37 H 0.111 0.889 38 H 0.115 0.885 39 H 0.125 0.875 40 H 0.073 0.927 41 H 0.154 0.846 42 H 0.169 0.831 43 H 0.165 0.835 44 H 0.159 0.841 45 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 0.838 4.654 -5.198 7.027 hybrid contribution -1.289 0.226 0.816 1.542 sum -0.451 4.880 -4.383 6.575 Atomic orbital electron populations 1.86597 1.19059 1.80658 1.50397 1.24477 0.83547 1.11819 0.96353 0.94258 0.89976 0.70959 0.77818 1.19615 1.12853 0.91832 0.99379 1.22764 0.98818 0.96638 0.89017 1.48115 1.47561 1.03509 1.14963 1.22019 0.92889 1.04805 0.81741 1.21081 0.85547 0.82209 0.82980 1.90824 1.71469 1.42713 1.39256 1.45732 1.24625 1.48529 1.16498 1.22384 0.82929 0.94629 0.98766 0.89780 1.23286 0.93052 1.03921 0.95409 1.22952 0.96367 0.99847 0.97199 0.89007 1.22246 0.75691 1.03056 0.97761 1.92739 1.39139 1.97782 1.92647 1.23568 0.95781 0.99842 0.98996 1.77689 1.19611 1.04058 1.10058 1.20883 0.98298 0.93633 0.92878 1.18005 0.98970 0.93535 0.92369 1.21347 0.99788 0.99847 0.91512 1.21422 0.97646 0.94087 1.00781 1.21585 0.97781 0.98665 0.95715 1.21354 1.00256 0.98999 0.93864 1.21260 0.97994 0.94309 0.99857 0.76149 0.90511 1.20081 1.21194 0.76837 0.84189 0.80364 0.73856 0.90037 0.86159 0.88913 0.88482 0.87474 0.92694 0.84591 0.83140 0.83463 0.84141 0.86993 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.11 12.86 -148.98 -1.92 -5.03 16 2 C -0.05 -0.15 2.50 71.24 0.18 0.03 16 3 Si 0.77 -1.97 30.77 68.60 2.11 0.14 16 4 C -0.23 -1.64 5.39 -19.95 -0.11 -1.74 16 5 C 0.07 0.17 9.96 83.47 0.83 1.00 16 6 N -0.36 -1.79 3.40 -351.93 -1.20 -2.99 16 7 C 0.11 -0.59 6.99 85.63 0.60 0.01 16 8 C 0.50 0.59 7.86 87.66 0.69 1.28 16 9 O -0.57 -7.96 15.29 -3.05 -0.05 -8.01 16 10 N -0.70 4.35 5.35 -440.04 -2.36 1.99 16 11 C 0.12 -0.34 4.24 45.51 0.19 -0.14 16 12 H 0.08 0.38 7.46 -2.39 -0.02 0.37 16 13 C -0.12 0.99 7.39 31.12 0.23 1.22 16 14 C -0.14 0.70 4.09 -10.26 -0.04 0.66 16 15 H 0.09 -0.17 8.14 -2.39 -0.02 -0.19 16 16 C 0.07 -0.36 7.39 71.98 0.53 0.17 16 17 F -0.24 -0.93 17.36 44.97 0.78 -0.15 16 18 C -0.14 0.52 7.43 31.12 0.23 0.75 16 19 N -0.29 -4.11 11.66 -48.16 -0.56 -4.67 16 20 C 0.11 1.40 6.67 42.53 0.28 1.69 16 21 C -0.03 -0.33 5.74 -20.04 -0.12 -0.44 16 22 C -0.11 -0.81 8.89 22.48 0.20 -0.61 16 23 C -0.12 -0.51 10.03 22.24 0.22 -0.29 16 24 C -0.12 -0.50 10.04 22.31 0.22 -0.28 16 25 C -0.13 -0.87 10.03 22.24 0.22 -0.64 16 26 C -0.11 -1.32 9.78 22.48 0.22 -1.10 16 27 H 0.39 -1.05 8.74 -74.06 -0.65 -1.69 16 28 H 0.08 0.06 5.56 -2.39 -0.01 0.05 16 29 H -0.27 -0.23 7.04 99.48 0.70 0.47 16 30 H -0.29 -0.50 7.11 99.48 0.71 0.21 16 31 H 0.22 -1.41 6.35 -2.91 -0.02 -1.42 16 32 H 0.14 -1.38 8.14 -2.38 -0.02 -1.40 16 33 H 0.18 -2.86 8.07 -2.39 -0.02 -2.88 16 34 H 0.42 -6.27 8.73 -92.71 -0.81 -7.08 16 35 H 0.08 -0.60 8.14 -2.39 -0.02 -0.62 16 36 H 0.12 -1.67 8.08 -2.39 -0.02 -1.68 16 37 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 38 H 0.10 -0.94 7.85 -2.39 -0.02 -0.96 16 39 H 0.11 -0.79 7.90 -2.38 -0.02 -0.81 16 40 H 0.05 0.07 8.14 -2.38 -0.02 0.05 16 41 H 0.14 0.56 6.21 -2.91 -0.02 0.54 16 42 H 0.15 -0.23 8.06 -2.91 -0.02 -0.25 16 43 H 0.15 -0.18 8.06 -2.91 -0.02 -0.20 16 44 H 0.14 0.33 8.06 -2.91 -0.02 0.31 16 45 H 0.11 1.34 8.06 -2.91 -0.02 1.32 16 Total: 0.00 -34.84 383.17 1.02 -33.82 By element: Atomic # 1 Polarization: -16.29 SS G_CDS: -0.38 Total: -16.67 kcal Atomic # 6 Polarization: -3.03 SS G_CDS: 4.59 Total: 1.56 kcal Atomic # 7 Polarization: -1.55 SS G_CDS: -4.12 Total: -5.66 kcal Atomic # 8 Polarization: -11.08 SS G_CDS: -1.96 Total: -13.04 kcal Atomic # 9 Polarization: -0.93 SS G_CDS: 0.78 Total: -0.15 kcal Atomic # 14 Polarization: -1.97 SS G_CDS: 2.11 Total: 0.14 kcal Total: -34.84 1.02 -33.82 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_12622748.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 54.799 kcal (2) G-P(sol) polarization free energy of solvation -34.844 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.955 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.022 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.822 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.977 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds