Wall clock time and date at job start Sun Mar 7 2021 04:46:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35880 * 116.99793 * 2 1 4 4 C 1.38821 * 119.93490 * 180.02562 * 3 2 1 5 5 C 1.37929 * 120.06202 * 180.02562 * 4 3 2 6 6 C 1.39355 * 119.93644 * 359.97430 * 5 4 3 7 7 C 1.48404 * 120.06295 * 179.97438 * 6 5 4 8 8 N 1.31627 * 126.03840 * 317.20857 * 7 6 5 9 9 N 1.40078 * 108.10897 * 180.02562 * 8 7 6 10 10 C 1.46500 * 125.92753 * 179.97438 * 9 8 7 11 11 C 1.50695 * 109.47152 * 305.02174 * 10 9 8 12 12 O 1.21280 * 120.00092 * 0.02562 * 11 10 9 13 13 N 1.34780 * 120.00084 * 180.02562 * 11 10 9 14 14 C 1.46498 * 120.00134 * 180.27916 * 13 11 10 15 15 H 1.08998 * 112.85092 * 23.52589 * 14 13 11 16 16 C 1.53775 * 113.61373 * 154.72553 * 14 13 11 17 17 C 1.53780 * 87.08153 * 139.98061 * 16 14 13 18 18 H 1.09000 * 113.61761 * 89.11480 * 17 16 14 19 19 C 1.53005 * 113.61112 * 220.01887 * 17 16 14 20 20 F 1.39899 * 109.47052 * 299.99765 * 19 17 16 21 21 C 1.53776 * 113.61115 * 252.21963 * 14 13 11 22 22 C 1.35036 * 108.13734 * 0.22541 * 9 8 7 23 23 C 1.35085 * 107.98119 * 359.63407 * 22 9 8 24 24 C 1.50705 * 126.07438 * 180.17647 * 23 22 9 25 25 O 1.42900 * 109.47229 * 105.25120 * 24 23 22 26 26 Si 1.86306 * 109.47127 * 345.24943 * 24 23 22 27 27 C 1.39356 * 119.87079 * 0.25336 * 6 5 4 28 28 C 1.37917 * 119.93513 * 359.49374 * 27 6 5 29 29 H 1.09008 * 109.46873 * 180.02562 * 1 2 3 30 30 H 1.09002 * 109.47452 * 300.00069 * 1 2 3 31 31 H 1.08996 * 109.47331 * 60.00712 * 1 2 3 32 32 H 1.07990 * 119.97033 * 359.97438 * 4 3 2 33 33 H 1.08000 * 120.03059 * 180.02562 * 5 4 3 34 34 H 1.08999 * 109.46483 * 185.02344 * 10 9 8 35 35 H 1.09003 * 109.46909 * 65.02386 * 10 9 8 36 36 H 0.96999 * 119.99636 * 359.97438 * 13 11 10 37 37 H 1.09002 * 113.61434 * 254.52457 * 16 14 13 38 38 H 1.08996 * 113.61890 * 25.34752 * 16 14 13 39 39 H 1.08997 * 109.47577 * 59.99864 * 19 17 16 40 40 H 1.09004 * 109.46705 * 179.97438 * 19 17 16 41 41 H 1.09001 * 113.61875 * 334.56875 * 21 14 13 42 42 H 1.09002 * 113.61521 * 105.47310 * 21 14 13 43 43 H 1.08002 * 126.00380 * 179.74087 * 22 9 8 44 44 H 1.09001 * 109.46790 * 225.25542 * 24 23 22 45 45 H 0.96699 * 113.99763 * 299.99472 * 25 24 23 46 46 H 1.48497 * 109.99753 * 58.68164 * 26 24 23 47 47 H 1.48498 * 110.00114 * 180.02562 * 26 24 23 48 48 H 1.07999 * 120.02669 * 179.72769 * 27 6 5 49 49 H 1.08002 * 119.96915 * 180.22911 * 28 27 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0458 1.2107 0.0000 4 6 3.4322 1.2819 -0.0005 5 6 4.0611 2.5094 0.0000 6 6 3.3034 3.6790 0.0005 7 6 3.9771 5.0013 0.0017 8 7 5.0243 5.3362 0.7253 9 7 5.3471 6.6677 0.4339 10 6 6.4485 7.4338 1.0223 11 6 6.3333 7.4061 2.5246 12 8 5.4214 6.8052 3.0519 13 7 7.2438 8.0491 3.2823 14 6 7.1354 8.0171 4.7429 15 1 6.5722 7.1577 5.1067 16 6 8.4771 8.2248 5.4649 17 6 7.7088 9.0918 6.4763 18 1 7.3017 8.5271 7.3151 19 6 8.4720 10.3432 6.9152 20 9 9.6770 9.9669 7.5183 21 6 6.6878 9.3541 5.3567 22 6 4.4635 7.1243 -0.4795 23 6 3.6085 6.1198 -0.7709 24 6 2.4614 6.1857 -1.7461 25 8 2.8067 5.4748 -2.9366 26 14 2.1053 7.9654 -2.1667 27 6 1.9118 3.6044 0.0059 28 6 1.2885 2.3741 0.0001 29 1 -0.3633 -1.0278 0.0005 30 1 -0.3634 0.5138 0.8900 31 1 -0.3634 0.5137 -0.8900 32 1 4.0189 0.3752 -0.0005 33 1 5.1397 2.5642 -0.0008 34 1 6.4007 8.4653 0.6732 35 1 7.3990 6.9924 0.7225 36 1 7.9734 8.5294 2.8605 37 1 8.8872 7.3114 5.8956 38 1 9.2076 8.7808 4.8774 39 1 8.6801 10.9658 6.0451 40 1 7.8686 10.9054 7.6279 41 1 6.9286 10.2201 4.7402 42 1 5.6533 9.3523 5.7002 43 1 4.4448 8.1173 -0.9037 44 1 1.5765 5.7345 -1.2971 45 1 3.5868 5.8225 -3.3900 46 1 3.3139 8.6009 -2.7503 47 1 0.9755 8.0441 -3.1271 48 1 1.3221 4.5092 0.0107 49 1 0.2101 2.3157 0.0004 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_12622750.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:46:34 Heat of formation + Delta-G solvation = -15.156377 kcal Electronic energy + Delta-G solvation = -33523.590448 eV Core-core repulsion = 28755.999139 eV Total energy + Delta-G solvation = -4767.591309 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.163 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -48.53026 -42.47976 -41.16528 -40.93567 -39.37618 -38.43101 -37.76601 -34.86187 -34.44621 -32.34370 -31.98719 -31.18125 -29.70942 -28.66656 -27.88762 -26.71024 -25.99587 -24.28399 -23.65256 -23.20858 -21.78651 -21.55320 -21.10232 -20.63873 -19.19802 -18.73193 -18.30274 -17.67615 -17.32269 -17.17537 -16.96848 -16.73640 -16.68418 -16.53871 -16.26400 -16.18970 -15.89881 -15.61984 -15.49752 -15.42814 -15.01587 -14.90098 -14.64255 -14.39697 -14.23219 -13.81528 -13.78060 -13.51246 -13.46800 -13.15941 -13.06732 -13.06012 -12.80600 -12.59889 -12.48649 -12.17530 -12.10374 -11.77919 -11.76185 -11.57953 -11.54432 -11.35753 -11.11588 -10.50554 -10.29157 -10.09685 -10.05323 -9.64907 -8.96875 -4.83141 0.09565 0.31720 0.82399 1.30881 1.43500 1.48911 1.63545 1.67553 2.04519 2.13083 2.32008 2.75920 3.35094 3.36708 3.40952 3.55421 3.58149 3.68695 3.71415 3.76532 3.79713 3.87551 3.97199 4.09693 4.14821 4.19045 4.20542 4.22254 4.27591 4.31128 4.37217 4.40929 4.51724 4.58866 4.65518 4.68882 4.70728 4.76399 4.78941 4.85132 4.88775 4.98919 5.00871 5.04708 5.05366 5.21927 5.24903 5.49289 5.52360 5.54504 5.67509 5.93738 6.37228 6.48704 6.61482 6.65664 7.18641 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.335 6.335 3 C 0.122 3.878 4 C -0.164 4.164 5 C -0.064 4.064 6 C -0.060 4.060 7 C 0.118 3.882 8 N -0.295 5.295 9 N -0.359 5.359 10 C 0.110 3.890 11 C 0.496 3.504 12 O -0.564 6.564 13 N -0.702 5.702 14 C 0.119 3.881 15 H 0.085 0.915 16 C -0.131 4.131 17 C -0.145 4.145 18 H 0.095 0.905 19 C 0.068 3.932 20 F -0.238 7.238 21 C -0.129 4.129 22 C 0.075 3.925 23 C -0.262 4.262 24 C -0.052 4.052 25 O -0.550 6.550 26 Si 0.772 3.228 27 C -0.058 4.058 28 C -0.207 4.207 29 H 0.117 0.883 30 H 0.066 0.934 31 H 0.066 0.934 32 H 0.139 0.861 33 H 0.128 0.872 34 H 0.180 0.820 35 H 0.139 0.861 36 H 0.422 0.578 37 H 0.068 0.932 38 H 0.108 0.892 39 H 0.097 0.903 40 H 0.086 0.914 41 H 0.111 0.889 42 H 0.068 0.932 43 H 0.218 0.782 44 H 0.107 0.893 45 H 0.382 0.618 46 H -0.257 1.257 47 H -0.305 1.305 48 H 0.143 0.857 49 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.451 9.249 -1.220 9.441 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.249 6.249 3 C 0.076 3.924 4 C -0.183 4.183 5 C -0.083 4.083 6 C -0.063 4.063 7 C -0.048 4.048 8 N -0.116 5.116 9 N -0.141 5.141 10 C -0.014 4.014 11 C 0.282 3.718 12 O -0.442 6.442 13 N -0.356 5.356 14 C 0.014 3.986 15 H 0.103 0.897 16 C -0.169 4.169 17 C -0.164 4.164 18 H 0.113 0.887 19 C 0.013 3.987 20 F -0.219 7.219 21 C -0.168 4.168 22 C -0.070 4.070 23 C -0.274 4.274 24 C -0.161 4.161 25 O -0.357 6.357 26 Si 0.674 3.326 27 C -0.077 4.077 28 C -0.225 4.225 29 H 0.136 0.864 30 H 0.084 0.916 31 H 0.084 0.916 32 H 0.157 0.843 33 H 0.146 0.854 34 H 0.197 0.803 35 H 0.157 0.843 36 H 0.260 0.740 37 H 0.087 0.913 38 H 0.127 0.873 39 H 0.115 0.885 40 H 0.105 0.895 41 H 0.130 0.870 42 H 0.087 0.913 43 H 0.235 0.765 44 H 0.125 0.875 45 H 0.231 0.769 46 H -0.182 1.182 47 H -0.233 1.233 48 H 0.161 0.839 49 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 1.369 8.586 -0.351 8.702 hybrid contribution 0.358 -0.592 -1.075 1.278 sum 1.727 7.994 -1.425 8.302 Atomic orbital electron populations 1.23366 0.76341 1.05636 1.02398 1.86051 1.23575 1.26824 1.88437 1.19286 0.92529 0.84833 0.95765 1.20503 0.91941 0.98713 1.07128 1.21027 0.99936 0.90832 0.96537 1.17842 0.93044 0.89510 1.05860 1.20677 0.94454 0.94247 0.95388 1.77724 1.17571 0.94265 1.22048 1.48128 1.24922 1.08683 1.32371 1.21997 0.89854 0.99990 0.89567 1.21117 0.82078 0.78260 0.90372 1.90824 1.34909 1.43491 1.74933 1.45761 1.29793 1.53764 1.06241 1.22385 0.98293 0.98720 0.79219 0.89655 1.23333 0.96035 1.00614 0.96928 1.22952 0.98047 0.97511 0.97898 0.88656 1.22163 0.80948 0.96442 0.99145 1.92742 1.49582 1.93388 1.86191 1.23394 0.99050 0.98137 0.96233 1.22833 0.90258 1.00802 0.93098 1.20537 1.05053 0.93759 1.08037 1.24727 0.96367 1.10633 0.84326 1.86591 1.51447 1.58697 1.38980 0.94243 0.78269 0.73968 0.86102 1.21113 0.92890 0.98080 0.95595 1.21395 1.01321 0.91413 1.08395 0.86444 0.91562 0.91550 0.84303 0.85393 0.80260 0.84343 0.74013 0.91335 0.87321 0.88458 0.89546 0.87033 0.91310 0.76538 0.87505 0.76929 1.18229 1.23273 0.83912 0.82814 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 113.37 1.11 1.11 16 2 O -0.34 -2.71 10.49 -92.20 -0.97 -3.68 16 3 C 0.12 1.14 6.69 22.55 0.15 1.29 16 4 C -0.16 -1.65 9.97 22.34 0.22 -1.43 16 5 C -0.06 -0.70 9.77 22.47 0.22 -0.48 16 6 C -0.06 -0.66 5.74 -20.03 -0.11 -0.78 16 7 C 0.12 1.19 6.66 42.52 0.28 1.47 16 8 N -0.29 -3.34 11.67 -48.16 -0.56 -3.90 16 9 N -0.36 -0.69 3.40 -351.92 -1.20 -1.89 16 10 C 0.11 -0.82 6.99 85.63 0.60 -0.22 16 11 C 0.50 -0.09 7.86 87.65 0.69 0.60 16 12 O -0.56 -7.06 15.30 -3.03 -0.05 -7.10 16 13 N -0.70 4.70 5.35 -440.06 -2.36 2.34 16 14 C 0.12 -0.38 4.24 45.51 0.19 -0.18 16 15 H 0.09 0.34 7.46 -2.39 -0.02 0.32 16 16 C -0.13 0.71 7.26 31.12 0.23 0.94 16 17 C -0.14 0.76 4.13 -10.27 -0.04 0.72 16 18 H 0.10 -0.32 8.14 -2.39 -0.02 -0.34 16 19 C 0.07 -0.39 7.40 71.98 0.53 0.15 16 20 F -0.24 -0.55 17.22 44.97 0.77 0.23 16 21 C -0.13 0.83 7.43 31.12 0.23 1.06 16 22 C 0.08 -0.13 9.96 83.47 0.83 0.70 16 23 C -0.26 -0.92 5.35 -19.95 -0.11 -1.02 16 24 C -0.05 -0.07 2.52 71.24 0.18 0.11 16 25 O -0.55 -2.67 12.88 -148.98 -1.92 -4.58 16 26 Si 0.77 -2.90 30.80 68.60 2.11 -0.79 16 27 C -0.06 -0.45 8.87 22.46 0.20 -0.25 16 28 C -0.21 -1.36 9.02 22.33 0.20 -1.16 16 29 H 0.12 -0.47 8.14 -2.38 -0.02 -0.48 16 30 H 0.07 -0.15 7.65 -2.39 -0.02 -0.16 16 31 H 0.07 -0.14 7.66 -2.39 -0.02 -0.16 16 32 H 0.14 1.04 8.06 -2.92 -0.02 1.01 16 33 H 0.13 1.28 8.06 -2.91 -0.02 1.25 16 34 H 0.18 -3.28 8.07 -2.39 -0.02 -3.29 16 35 H 0.14 -1.59 8.14 -2.39 -0.02 -1.61 16 36 H 0.42 -6.19 8.73 -92.71 -0.81 -7.00 16 37 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 38 H 0.11 -0.99 8.08 -2.39 -0.02 -1.01 16 39 H 0.10 -0.99 7.94 -2.39 -0.02 -1.01 16 40 H 0.09 -0.65 8.14 -2.38 -0.02 -0.67 16 41 H 0.11 -1.19 7.96 -2.39 -0.02 -1.20 16 42 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 43 H 0.22 -2.40 6.32 -2.91 -0.02 -2.42 16 44 H 0.11 0.18 5.56 -2.39 -0.01 0.17 16 45 H 0.38 -0.56 8.70 -74.06 -0.64 -1.21 16 46 H -0.26 1.03 7.00 99.48 0.70 1.72 16 47 H -0.30 -1.40 7.11 99.48 0.71 -0.69 16 48 H 0.14 0.54 6.23 -2.91 -0.02 0.52 16 49 H 0.15 0.15 6.28 -2.91 -0.02 0.13 16 Total: 0.00 -34.40 412.51 1.03 -33.37 By element: Atomic # 1 Polarization: -16.20 SS G_CDS: -0.41 Total: -16.61 kcal Atomic # 6 Polarization: -2.99 SS G_CDS: 5.61 Total: 2.61 kcal Atomic # 7 Polarization: 0.67 SS G_CDS: -4.12 Total: -3.45 kcal Atomic # 8 Polarization: -12.43 SS G_CDS: -2.93 Total: -15.36 kcal Atomic # 9 Polarization: -0.55 SS G_CDS: 0.77 Total: 0.23 kcal Atomic # 14 Polarization: -2.90 SS G_CDS: 2.11 Total: -0.79 kcal Total: -34.40 1.03 -33.37 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_12622750.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.210 kcal (2) G-P(sol) polarization free energy of solvation -34.399 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.189 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.032 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.366 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.156 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds