Wall clock time and date at job start Sun Mar 7 2021 04:46:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47206 * 2 1 4 4 C 1.50704 * 109.47221 * 119.99823 * 2 1 3 5 5 C 1.34833 * 125.65107 * 65.29854 * 4 2 1 6 6 C 1.40795 * 107.04981 * 180.15919 * 5 4 2 7 7 C 1.36109 * 106.73337 * 359.56997 * 6 5 4 8 8 C 1.47560 * 125.94613 * 180.28489 * 7 6 5 9 9 C 1.39921 * 119.95672 * 359.72916 * 8 7 6 10 10 C 1.36433 * 120.28012 * 179.75983 * 9 8 7 11 11 C 1.39873 * 120.18490 * 0.51431 * 10 9 8 12 12 C 1.47294 * 120.04781 * 179.76178 * 11 10 9 13 13 O 1.21620 * 120.00126 * 179.97438 * 12 11 10 14 14 N 1.34771 * 120.00015 * 359.97438 * 12 11 10 15 15 C 1.46503 * 120.00534 * 180.02562 * 14 12 11 16 16 H 1.09002 * 112.84099 * 23.79709 * 15 14 12 17 17 C 1.53774 * 113.61657 * 154.99572 * 15 14 12 18 18 C 1.53780 * 87.07827 * 139.98164 * 17 15 14 19 19 H 1.08999 * 113.61525 * 89.19935 * 18 17 15 20 20 C 1.53003 * 113.61574 * 220.01612 * 18 17 15 21 21 F 1.39902 * 109.47398 * 300.00584 * 20 18 17 22 22 C 1.53774 * 113.61144 * 252.49728 * 15 14 12 23 23 C 1.40409 * 119.90516 * 359.73601 * 11 10 9 24 24 O 1.35686 * 120.13473 * 179.97438 * 23 11 10 25 25 C 1.38269 * 119.72816 * 0.02562 * 23 11 10 26 26 O 1.34226 * 125.65161 * 244.97880 * 4 2 1 27 27 H 0.96697 * 113.99755 * 300.00378 * 1 2 3 28 28 H 1.08999 * 109.47490 * 239.99782 * 2 1 3 29 29 H 1.48500 * 110.00036 * 299.99940 * 3 2 1 30 30 H 1.48497 * 110.00030 * 61.31762 * 3 2 1 31 31 H 1.08005 * 126.47473 * 359.97438 * 5 4 2 32 32 H 1.08002 * 126.63743 * 179.83926 * 6 5 4 33 33 H 1.08004 * 119.86060 * 0.02562 * 9 8 7 34 34 H 1.07995 * 119.90865 * 180.27344 * 10 9 8 35 35 H 0.97010 * 119.99913 * 359.97438 * 14 12 11 36 36 H 1.09002 * 113.61751 * 254.53256 * 17 15 14 37 37 H 1.09001 * 113.61685 * 25.43731 * 17 15 14 38 38 H 1.09008 * 109.46829 * 59.99796 * 20 18 17 39 39 H 1.08994 * 109.47734 * 179.97438 * 20 18 17 40 40 H 1.08997 * 113.61797 * 334.56095 * 22 15 14 41 41 H 1.09002 * 113.61796 * 105.46583 * 22 15 14 42 42 H 0.96691 * 114.00443 * 270.02927 * 24 23 11 43 43 H 1.08003 * 120.09644 * 180.02562 * 25 23 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.7617 -2.0192 1.5067 6 6 2.3802 -2.2627 2.7478 7 6 2.9080 -1.0784 3.1618 8 6 3.6577 -0.8543 4.4128 9 6 3.8738 -1.9164 5.2977 10 6 4.5703 -1.7177 6.4539 11 6 5.0643 -0.4473 6.7679 12 6 5.8113 -0.2351 8.0194 13 8 6.2408 0.8698 8.2914 14 7 6.0189 -1.2652 8.8633 15 6 6.7614 -1.0541 10.1084 16 1 6.7351 -0.0181 10.4463 17 6 6.4182 -2.0704 11.2102 18 6 7.9178 -2.0896 11.5503 19 1 8.2088 -1.3378 12.2839 20 6 8.4528 -3.4837 11.8839 21 9 7.7670 -3.9937 12.9916 22 6 8.1730 -1.6639 10.0948 23 6 4.8474 0.6252 5.8880 24 8 5.3241 1.8596 6.1882 25 6 4.1453 0.4185 4.7149 26 8 2.6271 -0.1463 2.2303 27 1 -0.3933 0.4417 0.7650 28 1 1.7924 -0.5139 -0.8899 29 1 1.5615 2.4679 -1.2085 30 1 1.5879 2.4586 1.2242 31 1 1.2458 -2.7432 0.8933 32 1 2.4304 -3.2076 3.2685 33 1 3.4913 -2.8987 5.0624 34 1 4.7374 -2.5427 7.1304 35 1 5.6759 -2.1464 8.6466 36 1 5.7955 -1.6594 12.0049 37 1 6.0451 -3.0203 10.8273 38 1 8.3045 -4.1439 11.0293 39 1 9.5165 -3.4195 12.1127 40 1 8.2796 -2.5027 9.4069 41 1 8.9670 -0.9248 9.9888 42 1 4.7076 2.4072 6.6931 43 1 3.9754 1.2392 4.0336 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_12807986.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:46:39 Heat of formation + Delta-G solvation = -85.245285 kcal Electronic energy + Delta-G solvation = -29162.837443 eV Core-core repulsion = 24670.989338 eV Total energy + Delta-G solvation = -4491.848106 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.125 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -48.54667 -43.77824 -41.66914 -40.47249 -38.94631 -38.21725 -37.85832 -34.87667 -34.23679 -33.31004 -31.37075 -30.62928 -29.42355 -27.11563 -26.85558 -24.87579 -24.14903 -23.50516 -22.39634 -21.87425 -21.37137 -20.94538 -19.72566 -18.78135 -18.58942 -17.83771 -17.68671 -17.48336 -17.13040 -16.78585 -16.67320 -16.58922 -16.25797 -16.05424 -15.86525 -15.70939 -15.43663 -15.24308 -14.77459 -14.41521 -14.22739 -14.05201 -13.81166 -13.71636 -13.65970 -13.63139 -13.33447 -13.10792 -12.97942 -12.78433 -12.68582 -12.08564 -11.90980 -11.85532 -11.65924 -11.43656 -11.17561 -10.87369 -10.77921 -10.66367 -10.10974 -10.00182 -9.06172 -5.02240 -0.82921 0.06629 0.61501 1.07189 1.39117 1.41669 1.66598 1.88297 1.93596 2.03372 2.59040 2.97333 3.10734 3.21746 3.27066 3.30057 3.46232 3.50834 3.57873 3.69432 3.80518 3.85881 3.89872 3.91576 4.01614 4.10214 4.12786 4.27278 4.33412 4.49403 4.50715 4.56278 4.62472 4.64934 4.70308 4.73643 4.79881 4.85340 4.91127 4.95323 5.03607 5.10878 5.14845 5.33971 5.40635 5.46033 5.90866 6.18413 6.40668 6.65028 7.17754 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.035 4.035 3 Si 0.698 3.302 4 C -0.043 4.043 5 C -0.173 4.173 6 C -0.177 4.177 7 C 0.023 3.977 8 C 0.031 3.969 9 C -0.116 4.116 10 C -0.064 4.064 11 C -0.166 4.166 12 C 0.560 3.440 13 O -0.517 6.517 14 N -0.719 5.719 15 C 0.125 3.875 16 H 0.119 0.881 17 C -0.138 4.138 18 C -0.145 4.145 19 H 0.106 0.894 20 C 0.073 3.927 21 F -0.216 7.216 22 C -0.143 4.143 23 C 0.179 3.821 24 O -0.474 6.474 25 C -0.141 4.141 26 O -0.162 6.162 27 H 0.381 0.619 28 H 0.139 0.861 29 H -0.248 1.248 30 H -0.255 1.255 31 H 0.156 0.844 32 H 0.156 0.844 33 H 0.139 0.861 34 H 0.136 0.864 35 H 0.399 0.601 36 H 0.081 0.919 37 H 0.089 0.911 38 H 0.075 0.925 39 H 0.077 0.923 40 H 0.089 0.911 41 H 0.080 0.920 42 H 0.399 0.601 43 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.050 -3.656 -0.552 3.697 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.144 4.144 3 Si 0.597 3.403 4 C -0.093 4.093 5 C -0.192 4.192 6 C -0.196 4.196 7 C -0.027 4.027 8 C 0.030 3.970 9 C -0.134 4.134 10 C -0.083 4.083 11 C -0.170 4.170 12 C 0.347 3.653 13 O -0.393 6.393 14 N -0.371 5.371 15 C 0.020 3.980 16 H 0.137 0.863 17 C -0.176 4.176 18 C -0.164 4.164 19 H 0.124 0.876 20 C 0.018 3.982 21 F -0.197 7.197 22 C -0.182 4.182 23 C 0.132 3.868 24 O -0.285 6.285 25 C -0.159 4.159 26 O -0.059 6.059 27 H 0.229 0.771 28 H 0.156 0.844 29 H -0.172 1.172 30 H -0.179 1.179 31 H 0.173 0.827 32 H 0.174 0.826 33 H 0.157 0.843 34 H 0.154 0.846 35 H 0.235 0.765 36 H 0.099 0.901 37 H 0.108 0.892 38 H 0.093 0.907 39 H 0.095 0.905 40 H 0.108 0.892 41 H 0.098 0.902 42 H 0.257 0.743 43 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 0.692 -2.183 -1.155 2.565 hybrid contribution -1.651 -0.840 0.727 1.990 sum -0.958 -3.023 -0.428 3.200 Atomic orbital electron populations 1.86668 1.16637 1.80151 1.49246 1.24359 0.84017 1.12213 0.93830 0.94409 0.91478 0.73292 0.81095 1.22943 1.00552 0.93788 0.92059 1.21589 1.04025 0.95653 0.97964 1.21913 1.01999 0.98376 0.97299 1.20322 1.03797 0.87562 0.91000 1.17754 0.95596 0.93678 0.89946 1.20706 1.00219 0.98707 0.93802 1.20809 0.95378 0.95516 0.96575 1.20498 1.04814 0.95119 0.96567 1.18015 0.79533 0.84623 0.83104 1.90845 1.49730 1.23673 1.75044 1.45908 1.57549 1.12173 1.21468 1.22513 0.91171 1.00870 0.83422 0.86268 1.23348 0.96228 0.99685 0.98338 1.23005 0.97223 0.97830 0.98365 0.87591 1.21944 0.96237 0.93784 0.86274 1.92784 1.82172 1.88556 1.56216 1.23464 0.98187 1.01464 0.95081 1.18285 0.91306 0.85771 0.91402 1.84774 1.44622 1.22730 1.76410 1.21595 0.98712 0.97529 0.98099 1.83950 1.57542 1.37924 1.26468 0.77108 0.84397 1.17167 1.17923 0.82658 0.82609 0.84332 0.84632 0.76478 0.90054 0.89245 0.90720 0.90469 0.89238 0.90165 0.74251 0.83830 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.12 12.88 -35.23 -0.45 -0.58 16 2 C -0.03 0.03 2.98 36.01 0.11 0.14 16 3 Si 0.70 -0.69 32.11 -169.99 -5.46 -6.15 16 4 C -0.04 -0.01 6.21 -35.51 -0.22 -0.23 16 5 C -0.17 -0.03 10.78 -39.82 -0.43 -0.46 16 6 C -0.18 0.04 10.26 -39.38 -0.40 -0.36 16 7 C 0.02 0.02 7.02 -36.55 -0.26 -0.24 16 8 C 0.03 0.00 5.87 -104.95 -0.62 -0.61 16 9 C -0.12 0.21 9.48 -39.60 -0.38 -0.17 16 10 C -0.06 0.13 9.47 -39.62 -0.38 -0.24 16 11 C -0.17 -0.11 5.89 -104.79 -0.62 -0.73 16 12 C 0.56 1.08 7.75 -12.58 -0.10 0.98 16 13 O -0.52 -2.89 14.74 -16.69 -0.25 -3.13 16 14 N -0.72 0.83 5.30 -54.14 -0.29 0.54 16 15 C 0.13 -0.13 4.24 -67.12 -0.28 -0.42 16 16 H 0.12 0.08 7.46 -51.93 -0.39 -0.31 16 17 C -0.14 0.31 7.26 -25.92 -0.19 0.12 16 18 C -0.15 0.32 4.13 -89.81 -0.37 -0.05 16 19 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 20 C 0.07 -0.14 7.40 37.16 0.28 0.13 16 21 F -0.22 -0.33 17.22 2.25 0.04 -0.29 16 22 C -0.14 0.29 7.43 -25.92 -0.19 0.10 16 23 C 0.18 0.27 6.71 -38.75 -0.26 0.01 16 24 O -0.47 -1.10 11.56 -40.71 -0.47 -1.57 16 25 C -0.14 -0.10 9.65 -39.06 -0.38 -0.48 16 26 O -0.16 -0.19 8.79 4.72 0.04 -0.15 16 27 H 0.38 -0.93 8.70 45.56 0.40 -0.53 16 28 H 0.14 -0.33 7.96 -51.93 -0.41 -0.75 16 29 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 30 H -0.26 -0.41 7.11 56.52 0.40 -0.01 16 31 H 0.16 -0.16 8.06 -52.48 -0.42 -0.58 16 32 H 0.16 -0.41 7.24 -52.49 -0.38 -0.79 16 33 H 0.14 -0.57 6.95 -52.48 -0.36 -0.93 16 34 H 0.14 -0.70 6.37 -52.49 -0.33 -1.03 16 35 H 0.40 -1.56 6.73 -40.82 -0.27 -1.83 16 36 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 37 H 0.09 -0.28 8.08 -51.93 -0.42 -0.70 16 38 H 0.07 -0.25 7.94 -51.92 -0.41 -0.66 16 39 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 40 H 0.09 -0.25 7.96 -51.93 -0.41 -0.67 16 41 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 42 H 0.40 -0.55 9.06 45.56 0.41 -0.14 16 43 H 0.14 0.02 7.90 -52.48 -0.41 -0.39 16 LS Contribution 372.34 15.07 5.61 5.61 Total: 0.00 -9.69 372.34 -10.22 -19.91 By element: Atomic # 1 Polarization: -7.37 SS G_CDS: -4.32 Total: -11.69 kcal Atomic # 6 Polarization: 2.17 SS G_CDS: -4.68 Total: -2.51 kcal Atomic # 7 Polarization: 0.83 SS G_CDS: -0.29 Total: 0.54 kcal Atomic # 8 Polarization: -4.30 SS G_CDS: -1.13 Total: -5.43 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.04 Total: -0.29 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: -5.46 Total: -6.15 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -9.69 -10.22 -19.91 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_12807986.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.331 kcal (2) G-P(sol) polarization free energy of solvation -9.690 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.021 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.224 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.915 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.245 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds