Wall clock time and date at job start Sun Mar 7 2021 04:46:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.39284 * 121.03202 * 2 1 4 4 C 1.46495 * 134.19867 * 359.85896 * 3 2 1 5 5 C 1.50698 * 126.59865 * 0.33912 * 4 3 2 6 6 O 1.42902 * 109.47102 * 284.99431 * 5 4 3 7 7 Si 1.86303 * 109.47288 * 164.99389 * 5 4 3 8 8 C 1.34174 * 106.80213 * 180.35247 * 4 3 2 9 9 N 1.36945 * 109.95266 * 0.02562 * 8 4 3 10 10 C 1.37152 * 110.11319 * 359.97438 * 9 8 4 11 11 N 1.32823 * 132.96301 * 179.97438 * 10 9 8 12 12 C 1.31307 * 121.88629 * 180.02562 * 11 10 9 13 13 C 1.39745 * 121.03200 * 179.72585 * 2 1 3 14 14 C 1.47670 * 120.45637 * 0.02562 * 13 2 1 15 15 O 1.21576 * 119.99566 * 353.70836 * 14 13 2 16 16 N 1.34773 * 120.00249 * 173.70817 * 14 13 2 17 17 C 1.46500 * 119.99813 * 179.97438 * 16 14 13 18 18 H 1.08995 * 112.91196 * 23.74271 * 17 16 14 19 19 C 1.53780 * 113.61369 * 155.00274 * 17 16 14 20 20 C 1.53782 * 87.08445 * 139.97998 * 19 17 16 21 21 H 1.08996 * 113.61597 * 89.19851 * 20 19 17 22 22 C 1.53004 * 113.61233 * 220.02003 * 20 19 17 23 23 F 1.39901 * 109.46586 * 184.99596 * 22 20 19 24 24 C 1.53784 * 87.07978 * 334.56557 * 20 19 17 25 25 H 1.09007 * 109.47170 * 263.97406 * 1 2 3 26 26 H 1.08997 * 109.47177 * 23.97886 * 1 2 3 27 27 H 1.09000 * 109.47230 * 143.98002 * 1 2 3 28 28 H 1.09001 * 109.47521 * 44.99575 * 5 4 3 29 29 H 0.96697 * 113.99876 * 300.00303 * 6 5 4 30 30 H 1.48507 * 109.99736 * 58.68253 * 7 5 4 31 31 H 1.48502 * 110.00316 * 179.97438 * 7 5 4 32 32 H 1.08011 * 125.02437 * 179.97438 * 8 4 3 33 33 H 0.97007 * 124.94149 * 180.02562 * 9 8 4 34 34 H 1.08007 * 119.30995 * 179.97438 * 12 11 10 35 35 H 0.97002 * 120.00386 * 0.02562 * 16 14 13 36 36 H 1.09004 * 113.61397 * 25.43107 * 19 17 16 37 37 H 1.08999 * 113.61378 * 254.52759 * 19 17 16 38 38 H 1.09000 * 109.46798 * 304.99381 * 22 20 19 39 39 H 1.08997 * 109.47212 * 64.99849 * 22 20 19 40 40 H 1.09001 * 113.61670 * 139.98179 * 24 20 19 41 41 H 1.09000 * 113.61604 * 270.88597 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8516 2.6100 -0.0026 5 6 0.4527 3.1704 0.0009 6 8 -0.1238 3.0203 -1.2980 7 14 0.5086 4.9775 0.4505 8 6 2.9947 3.3125 -0.0090 9 7 4.0668 2.4604 -0.0112 10 6 3.6347 1.1588 -0.0057 11 7 4.2721 -0.0066 -0.0056 12 6 3.6267 -1.1501 0.0000 13 6 2.2274 -1.1974 0.0057 14 6 1.5225 -2.4950 0.0114 15 8 0.3127 -2.5290 0.1265 16 7 2.2203 -3.6415 -0.1111 17 6 1.5210 -4.9288 -0.1049 18 1 0.4768 -4.8459 -0.4064 19 6 2.2850 -6.0484 -0.8313 20 6 1.8286 -6.9859 0.2991 21 1 0.8693 -7.4664 0.1073 22 6 2.9076 -7.9723 0.7503 23 9 2.3688 -8.8527 1.6947 24 6 1.7265 -5.7354 1.1883 25 1 -0.3634 -0.1079 1.0220 26 1 -0.3633 0.9389 -0.4176 27 1 -0.3634 -0.8312 -0.6043 28 1 -0.1523 2.6330 0.7312 29 1 0.3635 3.4738 -1.9994 30 1 1.3564 5.7162 -0.5196 31 1 -0.8648 5.5422 0.4568 32 1 3.0598 4.3907 -0.0127 33 1 4.9965 2.7373 -0.0154 34 1 4.1870 -2.0734 -0.0006 35 1 3.1856 -3.6145 -0.2025 36 1 3.3634 -5.8929 -0.8610 37 1 1.8659 -6.3023 -1.8050 38 1 3.2661 -8.5373 -0.1101 39 1 3.7373 -7.4242 1.1965 40 1 0.8566 -5.7364 1.8451 41 1 2.6522 -5.4943 1.7108 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_12890568.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:46:42 Heat of formation + Delta-G solvation = -19.083039 kcal Electronic energy + Delta-G solvation = -26527.909508 eV Core-core repulsion = 22518.131496 eV Total energy + Delta-G solvation = -4009.778012 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.132 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -48.49627 -42.86112 -41.22656 -39.72477 -38.56938 -37.85509 -35.20537 -34.58065 -31.97219 -31.18024 -29.36970 -28.66917 -26.85824 -26.54581 -24.96943 -24.15605 -23.14900 -21.72809 -20.95847 -20.64751 -19.31529 -18.72400 -17.79506 -17.67600 -17.37662 -16.99507 -16.82175 -16.70913 -16.43698 -16.04569 -15.88014 -15.65396 -15.44053 -15.40769 -14.85317 -14.71052 -14.07140 -14.04579 -13.70048 -13.63687 -13.56635 -13.43442 -13.18486 -13.03892 -12.89062 -12.52437 -12.38018 -12.10320 -11.86026 -11.60200 -11.31989 -11.10563 -11.06287 -10.54083 -10.22645 -10.05526 -9.59893 -9.16150 -5.01691 -0.23820 -0.06727 1.22066 1.36141 1.49149 1.59114 1.90117 1.92925 2.09804 2.83800 3.23425 3.26413 3.33714 3.36558 3.47316 3.52538 3.57599 3.67714 3.72519 3.78981 3.98748 4.07718 4.10113 4.13678 4.23321 4.26639 4.48777 4.52619 4.53981 4.63573 4.65650 4.74561 4.80390 4.87900 4.95823 4.97633 5.05973 5.17408 5.20987 5.41112 5.48535 5.58832 5.77296 6.07891 6.42544 6.46789 6.84067 7.24125 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C 0.086 3.914 3 C -0.149 4.149 4 C -0.176 4.176 5 C -0.044 4.044 6 O -0.527 6.527 7 Si 0.686 3.314 8 C 0.067 3.933 9 N -0.570 5.570 10 C 0.308 3.692 11 N -0.504 5.504 12 C 0.181 3.819 13 C -0.235 4.235 14 C 0.573 3.427 15 O -0.528 6.528 16 N -0.719 5.719 17 C 0.126 3.874 18 H 0.120 0.880 19 C -0.138 4.138 20 C -0.144 4.144 21 H 0.107 0.893 22 C 0.073 3.927 23 F -0.217 7.217 24 C -0.147 4.147 25 H 0.083 0.917 26 H 0.083 0.917 27 H 0.097 0.903 28 H 0.119 0.881 29 H 0.375 0.625 30 H -0.258 1.258 31 H -0.254 1.254 32 H 0.184 0.816 33 H 0.425 0.575 34 H 0.162 0.838 35 H 0.399 0.601 36 H 0.091 0.909 37 H 0.082 0.918 38 H 0.076 0.924 39 H 0.075 0.925 40 H 0.078 0.922 41 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.723 2.724 -0.191 5.455 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C 0.078 3.922 3 C -0.156 4.156 4 C -0.184 4.184 5 C -0.155 4.155 6 O -0.333 6.333 7 Si 0.587 3.413 8 C -0.059 4.059 9 N -0.175 5.175 10 C 0.075 3.925 11 N -0.217 5.217 12 C 0.012 3.988 13 C -0.242 4.242 14 C 0.361 3.639 15 O -0.405 6.405 16 N -0.370 5.370 17 C 0.021 3.979 18 H 0.138 0.862 19 C -0.177 4.177 20 C -0.164 4.164 21 H 0.125 0.875 22 C 0.018 3.982 23 F -0.198 7.198 24 C -0.186 4.186 25 H 0.101 0.899 26 H 0.102 0.898 27 H 0.116 0.884 28 H 0.137 0.863 29 H 0.222 0.778 30 H -0.183 1.183 31 H -0.178 1.178 32 H 0.200 0.800 33 H 0.264 0.736 34 H 0.179 0.821 35 H 0.235 0.765 36 H 0.109 0.891 37 H 0.101 0.899 38 H 0.095 0.905 39 H 0.094 0.906 40 H 0.097 0.903 41 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 4.242 3.331 -0.020 5.394 hybrid contribution 0.423 -0.220 -1.157 1.251 sum 4.665 3.111 -1.176 5.730 Atomic orbital electron populations 1.21273 0.88774 1.04974 1.03912 1.19928 0.97185 0.89139 0.85949 1.19470 0.92766 0.93522 1.09840 1.20615 0.95221 0.91034 1.11506 1.24415 0.90890 1.11859 0.88302 1.86620 1.54322 1.75923 1.16439 0.95116 0.82714 0.73536 0.89968 1.21802 0.85115 0.95968 1.03057 1.41515 1.09596 1.02716 1.63686 1.18496 0.89360 0.85877 0.98809 1.66436 1.40567 0.96015 1.18699 1.22495 0.90083 0.94426 0.91816 1.20444 0.94753 0.93797 1.15199 1.17914 0.86855 0.83319 0.75825 1.90762 1.13598 1.87039 1.49146 1.45873 1.10542 1.05482 1.75148 1.22488 0.98419 0.80451 0.96511 0.86216 1.23346 1.01184 0.94665 0.98460 1.23022 1.00537 0.95017 0.97788 0.87470 1.21984 0.95535 0.90078 0.90597 1.92788 1.88153 1.71208 1.67645 1.23575 1.03445 0.94313 0.97219 0.89904 0.89838 0.88434 0.86326 0.77778 1.18276 1.17817 0.79958 0.73597 0.82140 0.76527 0.89083 0.89929 0.90529 0.90641 0.90339 0.89329 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.38 8.45 36.01 0.30 -0.08 16 2 C 0.09 0.25 5.98 -103.67 -0.62 -0.37 16 3 C -0.15 -0.34 6.16 -105.13 -0.65 -0.99 16 4 C -0.18 0.01 5.57 -102.73 -0.57 -0.56 16 5 C -0.04 0.03 1.88 36.00 0.07 0.10 16 6 O -0.53 -0.34 11.64 -35.23 -0.41 -0.76 16 7 Si 0.69 -1.57 30.83 -169.99 -5.24 -6.81 16 8 C 0.07 -0.14 10.44 -16.70 -0.17 -0.31 16 9 N -0.57 0.63 6.04 -12.12 -0.07 0.55 16 10 C 0.31 0.61 8.42 -155.71 -1.31 -0.70 16 11 N -0.50 -1.15 10.37 -11.96 -0.12 -1.27 16 12 C 0.18 0.12 10.67 -17.11 -0.18 -0.06 16 13 C -0.23 -0.47 5.89 -104.82 -0.62 -1.09 16 14 C 0.57 1.28 7.72 -12.41 -0.10 1.18 16 15 O -0.53 -2.78 13.10 5.30 0.07 -2.71 16 16 N -0.72 0.69 5.31 -54.01 -0.29 0.41 16 17 C 0.13 -0.13 4.24 -67.11 -0.28 -0.42 16 18 H 0.12 0.08 7.46 -51.93 -0.39 -0.31 16 19 C -0.14 0.43 7.39 -25.92 -0.19 0.24 16 20 C -0.14 0.29 4.10 -89.80 -0.37 -0.08 16 21 H 0.11 -0.16 8.14 -51.93 -0.42 -0.59 16 22 C 0.07 -0.12 7.39 37.16 0.27 0.15 16 23 F -0.22 -0.49 17.36 2.25 0.04 -0.45 16 24 C -0.15 0.18 7.43 -25.91 -0.19 -0.01 16 25 H 0.08 0.22 8.14 -51.93 -0.42 -0.20 16 26 H 0.08 0.22 4.80 -51.93 -0.25 -0.03 16 27 H 0.10 0.42 5.96 -51.93 -0.31 0.11 16 28 H 0.12 -0.08 7.15 -51.93 -0.37 -0.45 16 29 H 0.37 -0.83 8.70 45.56 0.40 -0.44 16 30 H -0.26 0.32 7.00 56.52 0.40 0.72 16 31 H -0.25 -0.36 7.11 56.52 0.40 0.05 16 32 H 0.18 -0.94 6.28 -52.48 -0.33 -1.27 16 33 H 0.43 -1.54 8.96 -40.82 -0.37 -1.90 16 34 H 0.16 -0.49 6.43 -52.48 -0.34 -0.82 16 35 H 0.40 -1.46 6.80 -40.82 -0.28 -1.74 16 36 H 0.09 -0.41 8.08 -51.93 -0.42 -0.83 16 37 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 38 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 39 H 0.08 -0.23 7.84 -51.93 -0.41 -0.64 16 40 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 41 H 0.09 -0.17 7.90 -51.93 -0.41 -0.58 16 LS Contribution 337.54 15.07 5.09 5.09 Total: 0.00 -9.29 337.54 -10.34 -19.63 By element: Atomic # 1 Polarization: -5.89 SS G_CDS: -4.79 Total: -10.67 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: -4.61 Total: -3.00 kcal Atomic # 7 Polarization: 0.17 SS G_CDS: -0.48 Total: -0.31 kcal Atomic # 8 Polarization: -3.13 SS G_CDS: -0.34 Total: -3.47 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.04 Total: -0.45 kcal Atomic # 14 Polarization: -1.57 SS G_CDS: -5.24 Total: -6.81 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -9.29 -10.34 -19.63 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_12890568.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.546 kcal (2) G-P(sol) polarization free energy of solvation -9.294 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.747 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.336 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.629 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.083 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds