Wall clock time and date at job start Sun Mar 7 2021 04:46:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86302 * 109.47181 * 2 1 4 4 C 1.50699 * 109.47399 * 119.99942 * 2 1 3 5 5 C 1.38337 * 119.87199 * 65.00211 * 4 2 1 6 6 C 1.37993 * 120.12917 * 180.02562 * 5 4 2 7 7 C 1.39404 * 119.87421 * 359.97438 * 6 5 4 8 8 C 1.48272 * 120.12884 * 180.02562 * 7 6 5 9 9 C 1.39508 * 119.97397 * 180.02562 * 8 7 6 10 10 C 1.37668 * 120.02477 * 180.02562 * 9 8 7 11 11 C 1.39714 * 119.97352 * 0.02562 * 10 9 8 12 12 C 1.47718 * 120.02136 * 179.97438 * 11 10 9 13 13 O 1.21571 * 120.00334 * 0.02562 * 12 11 10 14 14 N 1.34779 * 119.99660 * 180.02562 * 12 11 10 15 15 C 1.46500 * 119.99895 * 180.02562 * 14 12 11 16 16 H 1.09003 * 112.85046 * 336.19048 * 15 14 12 17 17 C 1.53775 * 113.61656 * 107.50207 * 15 14 12 18 18 C 1.53779 * 87.08438 * 139.98199 * 17 15 14 19 19 H 1.09002 * 113.61731 * 89.11293 * 18 17 15 20 20 C 1.53000 * 113.69071 * 220.00724 * 18 17 15 21 21 F 1.39898 * 109.47327 * 164.06129 * 20 18 17 22 22 C 1.53777 * 113.61534 * 204.99945 * 15 14 12 23 23 C 1.39704 * 119.95155 * 0.25807 * 11 10 9 24 24 C 1.37667 * 119.97357 * 359.46147 * 23 11 10 25 25 C 1.39404 * 119.74146 * 0.28254 * 7 6 5 26 26 C 1.38005 * 119.87210 * 359.46933 * 25 7 6 27 27 H 0.96697 * 114.00552 * 299.99666 * 1 2 3 28 28 H 1.08997 * 109.47513 * 239.99990 * 2 1 3 29 29 H 1.48499 * 110.00390 * 178.68079 * 3 2 1 30 30 H 1.48498 * 110.00103 * 299.99988 * 3 2 1 31 31 H 1.08001 * 119.93294 * 359.97438 * 5 4 2 32 32 H 1.07998 * 120.06812 * 179.97438 * 6 5 4 33 33 H 1.07994 * 119.98981 * 359.97438 * 9 8 7 34 34 H 1.07993 * 120.01456 * 180.02562 * 10 9 8 35 35 H 0.97002 * 120.00021 * 359.97438 * 14 12 11 36 36 H 1.08993 * 113.61636 * 25.42563 * 17 15 14 37 37 H 1.09008 * 113.61006 * 254.52805 * 17 15 14 38 38 H 1.08997 * 109.47255 * 284.06405 * 20 18 17 39 39 H 1.09000 * 109.46911 * 44.06126 * 20 18 17 40 40 H 1.08997 * 113.61941 * 105.46412 * 22 15 14 41 41 H 1.09009 * 113.68972 * 334.57492 * 22 15 14 42 42 H 1.08006 * 120.01497 * 179.72377 * 23 11 10 43 43 H 1.08009 * 119.98779 * 180.27735 * 24 23 11 44 44 H 1.08004 * 120.06439 * 179.72258 * 25 7 6 45 45 H 1.07995 * 119.93201 * 180.23356 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6831 -2.0612 1.3958 6 6 2.1402 -2.7169 2.5207 7 6 2.8539 -2.0155 3.4913 8 6 3.3481 -2.7145 4.7019 9 6 4.0615 -2.0093 5.6714 10 6 4.5214 -2.6574 6.7956 11 6 4.2739 -4.0219 6.9650 12 6 4.7673 -4.7185 8.1706 13 8 5.3886 -4.1043 9.0160 14 7 4.5287 -6.0350 8.3332 15 6 5.0176 -6.7257 9.5291 16 1 5.8704 -6.2255 9.9879 17 6 3.9060 -7.0920 10.5266 18 6 4.6426 -8.4254 10.7371 19 1 5.3924 -8.3901 11.5275 20 6 3.7087 -9.6313 10.8576 21 9 4.4427 -10.8092 10.6814 22 6 5.2252 -8.2359 9.3266 23 6 3.5645 -4.7284 5.9906 24 6 3.1006 -4.0770 4.8700 25 6 3.0963 -0.6532 3.3218 26 6 2.6387 -0.0091 2.1903 27 1 -0.3934 0.4416 0.7650 28 1 1.7923 -0.5138 -0.8899 29 1 3.5345 1.7704 0.0321 30 1 1.5615 2.4679 -1.2085 31 1 1.1298 -2.6035 0.6433 32 1 1.9455 -3.7714 2.6489 33 1 4.2538 -0.9548 5.5397 34 1 5.0733 -2.1112 7.5462 35 1 4.0326 -6.5249 7.6588 36 1 2.9248 -7.2033 10.0654 37 1 3.8887 -6.4581 11.4132 38 1 3.2462 -9.6356 11.8446 39 1 2.9337 -9.5684 10.0936 40 1 6.2727 -8.5256 9.2442 41 1 4.6051 -8.6613 8.5373 42 1 3.3764 -5.7842 6.1184 43 1 2.5483 -4.6220 4.1186 44 1 3.6448 -0.1037 4.0727 45 1 2.8293 1.0454 2.0563 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_13158362.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:46:45 Heat of formation + Delta-G solvation = -41.971489 kcal Electronic energy + Delta-G solvation = -27506.470725 eV Core-core repulsion = 23370.099736 eV Total energy + Delta-G solvation = -4136.370988 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.142 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -48.54505 -41.58209 -40.92956 -39.92396 -38.89076 -37.56215 -34.92841 -33.95650 -32.66903 -31.67933 -30.99457 -29.42172 -27.07670 -26.86972 -24.91083 -24.75489 -23.45508 -22.67586 -22.15694 -21.40624 -20.87994 -19.24295 -18.46630 -17.88935 -17.68033 -17.12452 -16.93813 -16.78745 -16.42663 -16.30603 -16.05719 -16.00371 -15.69969 -15.52012 -15.36894 -15.09038 -15.01090 -14.77991 -14.35729 -14.27988 -14.11476 -13.68682 -13.62346 -13.52952 -13.20209 -13.10849 -12.80469 -12.67985 -12.61182 -12.06070 -12.03340 -11.94977 -11.69880 -11.63947 -11.44432 -10.92738 -10.80693 -10.47216 -10.14667 -10.12726 -10.06218 -9.14505 -5.09029 -0.74116 0.25781 0.30029 0.45741 1.23047 1.58376 1.80942 1.92792 2.04524 2.55182 2.93951 3.21471 3.26571 3.32078 3.41956 3.47631 3.49959 3.59037 3.65407 3.72278 3.75974 3.87222 3.90964 3.93493 4.00953 4.11202 4.14973 4.18441 4.25340 4.41705 4.48383 4.52475 4.53771 4.59828 4.63967 4.70298 4.77273 4.82023 4.84547 4.89874 4.95312 5.04618 5.11094 5.12450 5.20097 5.32773 5.39969 5.44176 5.56152 5.71821 5.82137 6.40195 6.50091 7.14745 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.070 4.070 3 Si 0.686 3.314 4 C -0.114 4.114 5 C -0.090 4.090 6 C -0.105 4.105 7 C -0.049 4.049 8 C -0.017 4.017 9 C -0.118 4.118 10 C -0.053 4.053 11 C -0.137 4.137 12 C 0.560 3.440 13 O -0.533 6.533 14 N -0.717 5.717 15 C 0.124 3.876 16 H 0.120 0.880 17 C -0.143 4.143 18 C -0.145 4.145 19 H 0.106 0.894 20 C 0.073 3.927 21 F -0.216 7.216 22 C -0.139 4.139 23 C -0.082 4.082 24 C -0.118 4.118 25 C -0.100 4.100 26 C -0.113 4.113 27 H 0.379 0.621 28 H 0.114 0.886 29 H -0.257 1.257 30 H -0.254 1.254 31 H 0.129 0.871 32 H 0.129 0.871 33 H 0.135 0.865 34 H 0.140 0.860 35 H 0.401 0.599 36 H 0.089 0.911 37 H 0.080 0.920 38 H 0.077 0.923 39 H 0.074 0.926 40 H 0.081 0.919 41 H 0.089 0.911 42 H 0.128 0.872 43 H 0.133 0.867 44 H 0.132 0.868 45 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.046 0.192 0.058 3.052 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.180 4.180 3 Si 0.588 3.412 4 C -0.114 4.114 5 C -0.109 4.109 6 C -0.122 4.122 7 C -0.049 4.049 8 C -0.017 4.017 9 C -0.136 4.136 10 C -0.072 4.072 11 C -0.141 4.141 12 C 0.348 3.652 13 O -0.411 6.411 14 N -0.368 5.368 15 C 0.019 3.981 16 H 0.138 0.862 17 C -0.182 4.182 18 C -0.164 4.164 19 H 0.124 0.876 20 C 0.018 3.982 21 F -0.197 7.197 22 C -0.177 4.177 23 C -0.100 4.100 24 C -0.136 4.136 25 C -0.118 4.118 26 C -0.131 4.131 27 H 0.227 0.773 28 H 0.131 0.869 29 H -0.182 1.182 30 H -0.179 1.179 31 H 0.147 0.853 32 H 0.147 0.853 33 H 0.153 0.847 34 H 0.158 0.842 35 H 0.237 0.763 36 H 0.108 0.892 37 H 0.098 0.902 38 H 0.095 0.905 39 H 0.093 0.907 40 H 0.100 0.900 41 H 0.108 0.892 42 H 0.145 0.855 43 H 0.151 0.849 44 H 0.150 0.850 45 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -1.995 0.890 -0.316 2.208 hybrid contribution -0.130 -1.023 -0.492 1.142 sum -2.125 -0.133 -0.808 2.277 Atomic orbital electron populations 1.86512 1.16968 1.81704 1.49265 1.25075 0.85335 1.10163 0.97465 0.94763 0.81131 0.77999 0.87355 1.20458 0.99152 0.95042 0.96761 1.20975 0.98598 0.93740 0.97541 1.21313 0.97319 1.00119 0.93497 1.18817 0.98806 0.93491 0.93827 1.18992 0.96180 0.93308 0.93224 1.21252 0.98328 1.00516 0.93483 1.21236 0.96138 0.92935 0.96919 1.19978 1.03218 0.95111 0.95743 1.18320 0.79096 0.81890 0.85860 1.90799 1.40325 1.66003 1.43924 1.45904 1.57795 1.09356 1.23792 1.22531 0.97999 0.91797 0.85781 0.86230 1.23450 0.98759 0.95627 1.00336 1.23001 0.99597 0.94785 0.99011 0.87557 1.21940 0.92917 0.80112 1.03228 1.92785 1.79838 1.49995 1.97114 1.23373 1.02839 0.94695 0.96804 1.21191 0.96094 0.99532 0.93219 1.21163 1.00650 0.93746 0.98067 1.21233 0.99357 0.93600 0.97605 1.20943 0.98666 0.99364 0.94089 0.77317 0.86856 1.18199 1.17888 0.85302 0.85301 0.84719 0.84209 0.76345 0.89230 0.90152 0.90456 0.90723 0.90025 0.89243 0.85451 0.84908 0.84999 0.85245 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.12 12.83 -35.23 -0.45 -0.33 16 2 C -0.07 0.05 2.80 36.01 0.10 0.15 16 3 Si 0.69 -0.97 29.79 -169.99 -5.06 -6.04 16 4 C -0.11 0.06 5.36 -104.55 -0.56 -0.50 16 5 C -0.09 0.02 9.67 -39.63 -0.38 -0.36 16 6 C -0.10 0.07 9.43 -39.24 -0.37 -0.30 16 7 C -0.05 0.01 5.88 -104.90 -0.62 -0.60 16 8 C -0.02 0.00 5.88 -104.83 -0.62 -0.61 16 9 C -0.12 0.03 9.41 -39.32 -0.37 -0.34 16 10 C -0.05 -0.05 9.58 -39.24 -0.38 -0.42 16 11 C -0.14 -0.11 5.88 -104.93 -0.62 -0.72 16 12 C 0.56 1.17 7.77 -12.39 -0.10 1.08 16 13 O -0.53 -3.11 15.93 5.30 0.08 -3.02 16 14 N -0.72 0.63 5.30 -54.00 -0.29 0.34 16 15 C 0.12 -0.11 4.24 -67.12 -0.28 -0.40 16 16 H 0.12 0.10 7.46 -51.93 -0.39 -0.29 16 17 C -0.14 0.29 7.44 -25.92 -0.19 0.10 16 18 C -0.14 0.30 4.10 -89.81 -0.37 -0.07 16 19 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 20 C 0.07 -0.14 7.31 37.16 0.27 0.14 16 21 F -0.22 -0.37 17.32 2.25 0.04 -0.33 16 22 C -0.14 0.29 7.36 -25.92 -0.19 0.10 16 23 C -0.08 0.11 9.52 -39.24 -0.37 -0.26 16 24 C -0.12 0.14 9.41 -39.32 -0.37 -0.23 16 25 C -0.10 0.09 9.43 -39.23 -0.37 -0.28 16 26 C -0.11 0.13 8.65 -39.63 -0.34 -0.21 16 27 H 0.38 -1.53 8.70 45.56 0.40 -1.13 16 28 H 0.11 -0.03 7.96 -51.93 -0.41 -0.45 16 29 H -0.26 -0.26 7.11 56.52 0.40 0.15 16 30 H -0.25 -0.50 7.11 56.52 0.40 -0.09 16 31 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 32 H 0.13 -0.31 6.19 -52.49 -0.33 -0.64 16 33 H 0.14 -0.30 6.19 -52.49 -0.32 -0.63 16 34 H 0.14 0.14 7.64 -52.49 -0.40 -0.26 16 35 H 0.40 -1.40 6.75 -40.82 -0.28 -1.68 16 36 H 0.09 -0.26 8.06 -51.93 -0.42 -0.68 16 37 H 0.08 -0.11 8.14 -51.92 -0.42 -0.54 16 38 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 39 H 0.07 -0.24 8.09 -51.93 -0.42 -0.66 16 40 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 41 H 0.09 -0.27 8.08 -51.92 -0.42 -0.69 16 42 H 0.13 -0.53 6.39 -52.48 -0.34 -0.87 16 43 H 0.13 -0.41 6.19 -52.48 -0.32 -0.74 16 44 H 0.13 -0.37 6.19 -52.48 -0.33 -0.69 16 45 H 0.13 -0.40 4.89 -52.49 -0.26 -0.66 16 LS Contribution 373.89 15.07 5.63 5.63 Total: 0.00 -8.69 373.89 -11.71 -20.40 By element: Atomic # 1 Polarization: -7.36 SS G_CDS: -5.54 Total: -12.90 kcal Atomic # 6 Polarization: 2.38 SS G_CDS: -6.12 Total: -3.75 kcal Atomic # 7 Polarization: 0.63 SS G_CDS: -0.29 Total: 0.34 kcal Atomic # 8 Polarization: -2.99 SS G_CDS: -0.37 Total: -3.36 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.04 Total: -0.33 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: -5.06 Total: -6.04 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -8.69 -11.71 -20.40 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_13158362.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.573 kcal (2) G-P(sol) polarization free energy of solvation -8.688 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.261 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.711 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.399 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.971 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds