Wall clock time and date at job start Sun Mar 7 2021 04:46:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86303 * 109.47149 * 2 1 4 4 C 1.50698 * 109.46949 * 120.00097 * 2 1 3 5 5 C 1.34705 * 125.66735 * 64.98231 * 4 2 1 6 6 C 1.40972 * 107.03146 * 180.02562 * 5 4 2 7 7 C 1.35930 * 106.74042 * 0.02562 * 6 5 4 8 8 C 1.47818 * 125.92857 * 180.02562 * 7 6 5 9 9 C 1.39799 * 120.00337 * 0.02562 * 8 7 6 10 10 C 1.37808 * 120.24940 * 179.97438 * 9 8 7 11 11 C 1.38782 * 120.24349 * 0.04461 * 10 9 8 12 12 O 1.35643 * 120.00435 * 179.97438 * 11 10 9 13 13 C 1.40245 * 119.99170 * 359.97438 * 11 10 9 14 14 C 1.47567 * 120.12037 * 179.97438 * 13 11 10 15 15 O 1.21590 * 119.99644 * 359.97438 * 14 13 11 16 16 N 1.34777 * 120.00222 * 179.97438 * 14 13 11 17 17 C 1.46501 * 120.00026 * 180.02562 * 16 14 13 18 18 H 1.09007 * 112.85086 * 23.80093 * 17 16 14 19 19 C 1.53775 * 113.61588 * 154.99862 * 17 16 14 20 20 C 1.53777 * 87.08244 * 139.98147 * 19 17 16 21 21 H 1.08999 * 113.61634 * 89.11562 * 20 19 17 22 22 C 1.53000 * 113.61657 * 220.02004 * 20 19 17 23 23 F 1.39899 * 109.47048 * 300.00028 * 22 20 19 24 24 C 1.53772 * 87.08128 * 334.56789 * 20 19 17 25 25 C 1.39218 * 119.99978 * 179.74763 * 8 7 6 26 26 O 1.34347 * 125.66599 * 245.02626 * 4 2 1 27 27 H 0.96701 * 113.99712 * 300.00170 * 1 2 3 28 28 H 1.09000 * 109.46890 * 240.00090 * 2 1 3 29 29 H 1.48492 * 109.99974 * 299.99852 * 3 2 1 30 30 H 1.48501 * 109.99968 * 61.31939 * 3 2 1 31 31 H 1.07998 * 126.48430 * 0.03297 * 5 4 2 32 32 H 1.07994 * 126.62472 * 179.97438 * 6 5 4 33 33 H 1.08005 * 119.87382 * 0.02562 * 9 8 7 34 34 H 1.07994 * 119.87929 * 180.02562 * 10 9 8 35 35 H 0.96700 * 114.00255 * 90.00039 * 12 11 10 36 36 H 0.96995 * 119.99886 * 359.97438 * 16 14 13 37 37 H 1.09005 * 113.61578 * 254.52874 * 19 17 16 38 38 H 1.09004 * 113.61628 * 25.34660 * 19 17 16 39 39 H 1.08999 * 109.46926 * 59.99565 * 22 20 19 40 40 H 1.09002 * 109.47684 * 179.97438 * 22 20 19 41 41 H 1.09000 * 113.61946 * 270.88236 * 24 20 19 42 42 H 1.09001 * 113.61856 * 139.98093 * 24 20 19 43 43 H 1.08000 * 120.11803 * 0.02562 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.7568 -2.0166 1.5095 6 6 2.3811 -2.2610 2.7496 7 6 2.9070 -1.0777 3.1630 8 6 3.6573 -0.8528 4.4166 9 6 3.8795 -1.9146 5.2984 10 6 4.5788 -1.7107 6.4683 11 6 5.0669 -0.4496 6.7802 12 8 5.7541 -0.2543 7.9332 13 6 4.8496 0.6229 5.9031 14 6 5.3669 1.9652 6.2321 15 8 5.9824 2.1429 7.2656 16 7 5.1571 2.9941 5.3872 17 6 5.6712 4.3265 5.7137 18 1 6.5176 4.2972 6.3999 19 6 5.9081 5.2145 4.4808 20 6 5.3426 6.3801 5.3092 21 1 6.0986 6.9134 5.8856 22 6 4.4334 7.3157 4.5099 23 9 5.1540 7.8702 3.4467 24 6 4.5767 5.3254 6.1250 25 6 4.1478 0.4152 4.7164 26 8 2.6269 -0.1460 2.2317 27 1 -0.3933 0.4417 0.7651 28 1 1.7923 -0.5138 -0.8900 29 1 1.5616 2.4679 -1.2084 30 1 1.5880 2.4586 1.2242 31 1 1.2370 -2.7399 0.8987 32 1 2.4311 -3.2055 3.2707 33 1 3.5023 -2.8985 5.0616 34 1 4.7473 -2.5353 7.1450 35 1 6.7084 -0.3865 7.8496 36 1 4.6664 2.8522 4.5627 37 1 6.9608 5.3322 4.2233 38 1 5.2903 4.9459 3.6239 39 1 3.5857 6.7526 4.1197 40 1 4.0716 8.1131 5.1591 41 1 3.5937 5.0879 5.7182 42 1 4.5542 5.5325 7.1949 43 1 3.9808 1.2360 4.0346 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_13259648.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:46:55 Heat of formation + Delta-G solvation = -85.853348 kcal Electronic energy + Delta-G solvation = -29950.600506 eV Core-core repulsion = 25458.726033 eV Total energy + Delta-G solvation = -4491.874473 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.125 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -48.53957 -43.75981 -41.66366 -40.46835 -38.94393 -38.25443 -37.84516 -34.83642 -34.21543 -32.81779 -32.42028 -30.13115 -29.43489 -26.85030 -26.46486 -25.64428 -23.99915 -23.38791 -22.69677 -21.70504 -21.39750 -20.82726 -19.61537 -19.19292 -18.37841 -17.87383 -17.58576 -17.46008 -17.11862 -16.78703 -16.70028 -16.60570 -16.35935 -15.99828 -15.89434 -15.65133 -15.49294 -15.29595 -14.64412 -14.42897 -14.37357 -14.03338 -13.84632 -13.69962 -13.64823 -13.38574 -13.28706 -13.18669 -13.07717 -12.93688 -12.68282 -12.12827 -11.91052 -11.84482 -11.65261 -11.43018 -11.12083 -10.86572 -10.77446 -10.51538 -10.35974 -10.06568 -8.96589 -5.08438 -0.61177 -0.27497 0.71568 1.04279 1.39270 1.43743 1.62533 1.84616 1.89120 2.02303 2.57942 3.04395 3.08811 3.21035 3.22975 3.27933 3.42108 3.51279 3.53189 3.68074 3.81582 3.89726 3.92096 3.95376 4.02114 4.10632 4.12178 4.25738 4.33076 4.50611 4.52453 4.54559 4.59462 4.65495 4.70456 4.72726 4.77813 4.86019 4.91621 4.95370 5.04796 5.09722 5.14075 5.35336 5.39200 5.45674 5.91416 6.17256 6.39914 6.62951 7.16466 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.034 4.034 3 Si 0.698 3.302 4 C -0.050 4.050 5 C -0.169 4.169 6 C -0.188 4.188 7 C 0.035 3.965 8 C -0.034 4.034 9 C -0.052 4.052 10 C -0.149 4.149 11 C 0.180 3.820 12 O -0.475 6.475 13 C -0.165 4.165 14 C 0.561 3.439 15 O -0.516 6.516 16 N -0.719 5.719 17 C 0.125 3.875 18 H 0.120 0.880 19 C -0.138 4.138 20 C -0.144 4.144 21 H 0.106 0.894 22 C 0.073 3.927 23 F -0.216 7.216 24 C -0.144 4.144 25 C -0.054 4.054 26 O -0.166 6.166 27 H 0.380 0.620 28 H 0.138 0.862 29 H -0.248 1.248 30 H -0.255 1.255 31 H 0.154 0.846 32 H 0.155 0.845 33 H 0.140 0.860 34 H 0.146 0.854 35 H 0.400 0.600 36 H 0.400 0.600 37 H 0.082 0.918 38 H 0.089 0.911 39 H 0.074 0.926 40 H 0.077 0.923 41 H 0.088 0.912 42 H 0.080 0.920 43 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.578 -2.019 -2.130 2.991 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.144 4.144 3 Si 0.597 3.403 4 C -0.100 4.100 5 C -0.188 4.188 6 C -0.207 4.207 7 C -0.014 4.014 8 C -0.034 4.034 9 C -0.071 4.071 10 C -0.167 4.167 11 C 0.133 3.867 12 O -0.287 6.287 13 C -0.168 4.168 14 C 0.349 3.651 15 O -0.392 6.392 16 N -0.371 5.371 17 C 0.021 3.979 18 H 0.138 0.862 19 C -0.176 4.176 20 C -0.164 4.164 21 H 0.124 0.876 22 C 0.018 3.982 23 F -0.197 7.197 24 C -0.183 4.183 25 C -0.073 4.073 26 O -0.064 6.064 27 H 0.229 0.771 28 H 0.155 0.845 29 H -0.172 1.172 30 H -0.179 1.179 31 H 0.172 0.828 32 H 0.172 0.828 33 H 0.158 0.842 34 H 0.164 0.836 35 H 0.259 0.741 36 H 0.235 0.765 37 H 0.100 0.900 38 H 0.108 0.892 39 H 0.092 0.908 40 H 0.095 0.905 41 H 0.107 0.893 42 H 0.098 0.902 43 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 0.467 -0.911 -1.696 1.981 hybrid contribution -0.986 -0.629 -0.087 1.173 sum -0.519 -1.539 -1.783 2.412 Atomic orbital electron populations 1.86673 1.16687 1.80121 1.49220 1.24346 0.83984 1.12159 0.93899 0.94554 0.91358 0.73365 0.81065 1.22844 1.01160 0.93815 0.92147 1.21576 1.03632 0.95679 0.97894 1.21864 1.02817 0.98448 0.97570 1.20269 1.03068 0.87461 0.90650 1.17571 1.00231 0.94169 0.91454 1.21129 0.95308 0.98470 0.92161 1.21404 1.00875 0.96828 0.97584 1.18600 0.93069 0.90577 0.84418 1.84748 1.23944 1.92194 1.27827 1.20290 1.05484 0.94783 0.96291 1.18025 0.79652 0.83854 0.83610 1.90836 1.39930 1.84206 1.24205 1.45920 1.58027 1.08868 1.24276 1.22520 0.97719 0.79593 0.98110 0.86196 1.23350 1.02885 0.94423 0.96944 1.22998 0.99650 0.95171 0.98550 0.87552 1.21938 0.93308 0.96895 0.86101 1.92784 1.80498 1.87311 1.59089 1.23469 0.98724 0.94846 1.01240 1.21291 0.94458 0.96586 0.94923 1.83922 1.57970 1.37975 1.26497 0.77143 0.84496 1.17225 1.17910 0.82788 0.82780 0.84199 0.83619 0.74109 0.76462 0.89957 0.89203 0.90779 0.90494 0.89319 0.90160 0.84724 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.02 12.88 -35.23 -0.45 -0.44 16 2 C -0.03 0.04 2.98 36.00 0.11 0.15 16 3 Si 0.70 -1.26 32.11 -169.99 -5.46 -6.71 16 4 C -0.05 0.01 6.20 -35.56 -0.22 -0.21 16 5 C -0.17 0.00 10.78 -39.80 -0.43 -0.43 16 6 C -0.19 0.06 10.26 -39.37 -0.40 -0.34 16 7 C 0.04 0.01 7.03 -36.49 -0.26 -0.25 16 8 C -0.03 0.01 5.87 -105.03 -0.62 -0.60 16 9 C -0.05 0.08 9.54 -39.16 -0.37 -0.29 16 10 C -0.15 0.15 9.96 -39.54 -0.39 -0.24 16 11 C 0.18 0.17 6.72 -38.63 -0.26 -0.09 16 12 O -0.48 -0.82 11.55 -40.58 -0.47 -1.29 16 13 C -0.16 -0.15 5.88 -104.90 -0.62 -0.77 16 14 C 0.56 1.21 7.76 -12.46 -0.10 1.11 16 15 O -0.52 -2.85 14.74 -16.66 -0.25 -3.09 16 16 N -0.72 0.45 5.30 -54.05 -0.29 0.17 16 17 C 0.13 -0.10 4.24 -67.12 -0.28 -0.39 16 18 H 0.12 0.08 7.46 -51.92 -0.39 -0.31 16 19 C -0.14 0.28 7.26 -25.92 -0.19 0.09 16 20 C -0.14 0.29 4.13 -89.81 -0.37 -0.08 16 21 H 0.11 -0.22 8.14 -51.93 -0.42 -0.64 16 22 C 0.07 -0.12 7.40 37.16 0.28 0.16 16 23 F -0.22 -0.36 17.22 2.25 0.04 -0.33 16 24 C -0.14 0.24 7.43 -25.92 -0.19 0.05 16 25 C -0.05 0.03 9.20 -38.78 -0.36 -0.33 16 26 O -0.17 -0.05 8.80 4.57 0.04 -0.01 16 27 H 0.38 -1.03 8.70 45.56 0.40 -0.63 16 28 H 0.14 -0.37 7.96 -51.93 -0.41 -0.78 16 29 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 30 H -0.26 -0.10 7.11 56.52 0.40 0.30 16 31 H 0.15 -0.15 8.06 -52.49 -0.42 -0.58 16 32 H 0.15 -0.37 7.24 -52.49 -0.38 -0.75 16 33 H 0.14 -0.52 6.96 -52.48 -0.37 -0.88 16 34 H 0.15 -0.41 8.06 -52.49 -0.42 -0.83 16 35 H 0.40 -0.83 9.06 45.56 0.41 -0.41 16 36 H 0.40 -1.15 6.75 -40.82 -0.28 -1.42 16 37 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 38 H 0.09 -0.25 8.08 -51.93 -0.42 -0.67 16 39 H 0.07 -0.21 7.94 -51.93 -0.41 -0.62 16 40 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 41 H 0.09 -0.20 7.96 -51.93 -0.41 -0.61 16 42 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 43 H 0.14 -0.33 6.24 -52.49 -0.33 -0.66 16 LS Contribution 372.51 15.07 5.61 5.61 Total: 0.00 -9.37 372.51 -10.22 -19.59 By element: Atomic # 1 Polarization: -6.71 SS G_CDS: -4.32 Total: -11.03 kcal Atomic # 6 Polarization: 2.21 SS G_CDS: -4.68 Total: -2.47 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -0.29 Total: 0.17 kcal Atomic # 8 Polarization: -3.70 SS G_CDS: -1.13 Total: -4.82 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.04 Total: -0.33 kcal Atomic # 14 Polarization: -1.26 SS G_CDS: -5.46 Total: -6.71 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -9.37 -10.22 -19.59 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_13259648.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.266 kcal (2) G-P(sol) polarization free energy of solvation -9.370 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.636 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.218 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.588 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.853 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds