Wall clock time and date at job start Sun Mar 7 2021 04:47:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86306 * 109.46700 * 2 1 4 4 C 1.50702 * 109.47230 * 119.99755 * 2 1 3 5 5 C 1.34856 * 125.89847 * 217.29252 * 4 2 1 6 6 C 1.40940 * 107.46552 * 179.97438 * 5 4 2 7 7 C 1.34848 * 107.46825 * 0.22655 * 6 5 4 8 8 N 1.36562 * 125.89990 * 37.25289 * 4 2 1 9 9 C 1.40205 * 125.66893 * 0.03114 * 8 4 2 10 10 C 1.38821 * 120.06600 * 235.27733 * 9 8 4 11 11 C 1.38128 * 119.93494 * 179.74997 * 10 9 8 12 12 C 1.38273 * 120.06170 * 0.52643 * 11 10 9 13 13 C 1.50699 * 119.93321 * 179.72485 * 12 11 10 14 14 C 1.50700 * 109.46974 * 270.02178 * 13 12 11 15 15 O 1.21278 * 120.00402 * 0.02562 * 14 13 12 16 16 N 1.34776 * 119.99869 * 179.97438 * 14 13 12 17 17 C 1.46503 * 120.00268 * 180.02562 * 16 14 13 18 18 H 1.08998 * 112.84447 * 336.19402 * 17 16 14 19 19 C 1.53777 * 113.61540 * 107.50007 * 17 16 14 20 20 C 1.53777 * 87.07925 * 139.98308 * 19 17 16 21 21 H 1.08998 * 113.69226 * 89.12836 * 20 19 17 22 22 C 1.53002 * 113.61449 * 220.02013 * 20 19 17 23 23 F 1.39904 * 109.47396 * 162.49927 * 22 20 19 24 24 C 1.53777 * 87.08509 * 334.56855 * 20 19 17 25 25 C 1.38282 * 120.13392 * 359.74984 * 12 11 10 26 26 C 1.38130 * 120.06169 * 359.97438 * 25 12 11 27 27 H 0.96700 * 114.00363 * 305.49823 * 1 2 3 28 28 H 1.08993 * 109.47415 * 240.00060 * 2 1 3 29 29 H 1.48500 * 109.99908 * 299.99896 * 3 2 1 30 30 H 1.48491 * 110.00158 * 61.32191 * 3 2 1 31 31 H 1.08004 * 126.26384 * 359.96520 * 5 4 2 32 32 H 1.07998 * 126.26743 * 179.97438 * 6 5 4 33 33 H 1.08007 * 125.90002 * 179.77693 * 7 6 5 34 34 H 1.08003 * 120.03615 * 0.02784 * 10 9 8 35 35 H 1.07992 * 119.96944 * 180.30138 * 11 10 9 36 36 H 1.08997 * 109.47002 * 30.02786 * 13 12 11 37 37 H 1.09007 * 109.46960 * 150.02556 * 13 12 11 38 38 H 0.97009 * 120.00143 * 0.02562 * 16 14 13 39 39 H 1.09000 * 113.61478 * 254.53338 * 19 17 16 40 40 H 1.08998 * 113.61199 * 25.43713 * 19 17 16 41 41 H 1.09003 * 109.47211 * 282.49411 * 22 20 19 42 42 H 1.08994 * 109.47373 * 42.49797 * 22 20 19 43 43 H 1.09005 * 113.61488 * 270.88607 * 24 20 19 44 44 H 1.08993 * 113.61883 * 139.98109 * 24 20 19 45 45 H 1.07995 * 119.96964 * 179.97438 * 25 12 11 46 46 H 1.07994 * 120.03033 * 180.02562 * 26 25 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 3.0143 -0.3650 1.9561 6 6 3.1254 -1.2879 3.0156 7 6 2.1093 -2.1662 2.8956 8 7 1.3681 -1.8145 1.8037 9 6 0.2225 -2.4797 1.3445 10 6 -0.8558 -2.6766 2.1964 11 6 -1.9851 -3.3277 1.7396 12 6 -2.0379 -3.7928 0.4385 13 6 -3.2690 -4.5082 -0.0549 14 6 -3.1278 -5.9865 0.2019 15 8 -2.1263 -6.4166 0.7337 16 7 -4.1149 -6.8304 -0.1585 17 6 -3.9778 -8.2674 0.0917 18 1 -2.9386 -8.5853 0.1745 19 6 -4.8743 -8.7828 1.2298 20 6 -5.1296 -10.0252 0.3603 21 1 -4.4064 -10.8255 0.5169 22 6 -6.5779 -10.5164 0.4036 23 9 -6.8152 -11.3651 -0.6831 24 6 -4.8153 -9.1406 -0.8576 25 6 -0.9631 -3.6032 -0.4106 26 6 0.1666 -2.9477 0.0389 27 1 -0.3934 0.5130 0.7192 28 1 1.7923 -0.5138 -0.8899 29 1 1.5613 2.4679 -1.2085 30 1 1.5878 2.4586 1.2242 31 1 3.6754 0.4664 1.7610 32 1 3.8874 -1.2933 3.7809 33 1 1.9138 -3.0019 3.5512 34 1 -0.8135 -2.3171 3.2140 35 1 -2.8261 -3.4769 2.4004 36 1 -4.1449 -4.1299 0.4722 37 1 -3.3858 -4.3349 -1.1247 38 1 -4.9161 -6.4863 -0.5835 39 1 -4.3312 -8.9980 2.1501 40 1 -5.7638 -8.1748 1.3944 41 1 -6.7498 -11.0596 1.3329 42 1 -7.2530 -9.6623 0.3517 43 1 -5.6888 -8.6303 -1.2637 44 1 -4.2246 -9.6445 -1.6226 45 1 -1.0071 -3.9679 -1.4262 46 1 1.0055 -2.7996 -0.6249 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_13287746.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:47:08 Heat of formation + Delta-G solvation = -11.838598 kcal Electronic energy + Delta-G solvation = -29107.760451 eV Core-core repulsion = 24879.958733 eV Total energy + Delta-G solvation = -4227.801718 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.153 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -48.56185 -42.58693 -41.32900 -40.12953 -39.07616 -37.75855 -34.82601 -34.67734 -32.09982 -31.83646 -30.96987 -29.61066 -27.73389 -26.88788 -25.98423 -24.17421 -23.91187 -22.86661 -21.60482 -21.32264 -20.82561 -20.52516 -19.21480 -18.11926 -17.88529 -17.45350 -17.13970 -17.04015 -16.78489 -16.55554 -16.28440 -15.97271 -15.76137 -15.66243 -15.50999 -15.20471 -14.75127 -14.57703 -14.46567 -14.30388 -14.09696 -13.84076 -13.70476 -13.60599 -13.25977 -13.18665 -13.11073 -12.97368 -12.78585 -12.56089 -12.23463 -12.07683 -11.95429 -11.78667 -11.66353 -11.45356 -10.92851 -10.84981 -10.16109 -10.12345 -9.93022 -9.13819 -8.96322 -4.91697 0.07286 0.41279 1.11259 1.44237 1.58040 1.67913 1.87996 2.05759 2.09798 2.19388 2.74985 3.19521 3.26027 3.29660 3.46906 3.54466 3.61206 3.73265 3.75522 3.83097 3.92362 3.93279 3.99459 4.11036 4.12325 4.22280 4.29037 4.40200 4.46635 4.50630 4.52560 4.54262 4.61860 4.63230 4.67979 4.69532 4.82673 4.86609 4.88968 4.99192 5.11610 5.25017 5.28037 5.33633 5.43421 5.45509 5.52525 5.81743 6.02069 6.26923 6.39804 6.41157 6.60693 7.17070 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.052 4.052 3 Si 0.710 3.290 4 C -0.013 4.013 5 C -0.186 4.186 6 C -0.190 4.190 7 C -0.005 4.005 8 N -0.391 5.391 9 C 0.131 3.869 10 C -0.116 4.116 11 C -0.091 4.091 12 C -0.063 4.063 13 C -0.104 4.104 14 C 0.515 3.485 15 O -0.527 6.527 16 N -0.723 5.723 17 C 0.124 3.876 18 H 0.117 0.883 19 C -0.143 4.143 20 C -0.145 4.145 21 H 0.106 0.894 22 C 0.073 3.927 23 F -0.216 7.216 24 C -0.138 4.138 25 C -0.088 4.088 26 C -0.092 4.092 27 H 0.373 0.627 28 H 0.115 0.885 29 H -0.256 1.256 30 H -0.257 1.257 31 H 0.147 0.853 32 H 0.142 0.858 33 H 0.163 0.837 34 H 0.127 0.873 35 H 0.127 0.873 36 H 0.106 0.894 37 H 0.106 0.894 38 H 0.402 0.598 39 H 0.078 0.922 40 H 0.089 0.911 41 H 0.077 0.923 42 H 0.074 0.926 43 H 0.089 0.911 44 H 0.080 0.920 45 H 0.127 0.873 46 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.622 1.128 -0.229 2.864 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.161 4.161 3 Si 0.609 3.391 4 C -0.122 4.122 5 C -0.210 4.210 6 C -0.214 4.214 7 C -0.133 4.133 8 N -0.064 5.064 9 C 0.041 3.959 10 C -0.135 4.135 11 C -0.110 4.110 12 C -0.064 4.064 13 C -0.144 4.144 14 C 0.301 3.699 15 O -0.402 6.402 16 N -0.375 5.375 17 C 0.019 3.981 18 H 0.135 0.865 19 C -0.182 4.182 20 C -0.164 4.164 21 H 0.124 0.876 22 C 0.018 3.982 23 F -0.197 7.197 24 C -0.177 4.177 25 C -0.107 4.107 26 C -0.111 4.111 27 H 0.220 0.780 28 H 0.133 0.867 29 H -0.181 1.181 30 H -0.181 1.181 31 H 0.165 0.835 32 H 0.160 0.840 33 H 0.181 0.819 34 H 0.145 0.855 35 H 0.145 0.855 36 H 0.124 0.876 37 H 0.124 0.876 38 H 0.236 0.764 39 H 0.097 0.903 40 H 0.107 0.893 41 H 0.095 0.905 42 H 0.093 0.907 43 H 0.108 0.892 44 H 0.099 0.901 45 H 0.145 0.855 46 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -2.283 1.126 -0.494 2.593 hybrid contribution -1.437 -0.231 0.392 1.507 sum -3.719 0.895 -0.102 3.827 Atomic orbital electron populations 1.86613 1.17512 1.74366 1.54640 1.24740 0.84020 1.11012 0.96371 0.94444 0.91653 0.72644 0.80351 1.21001 0.98619 0.92449 1.00149 1.20678 0.99262 1.03190 0.97895 1.20927 1.01004 0.97783 1.01716 1.22030 0.95338 1.03055 0.92840 1.41427 1.20390 1.21866 1.22766 1.17603 0.86339 0.97861 0.94109 1.20988 0.92147 1.00625 0.99784 1.20788 0.97734 0.97509 0.94921 1.19265 0.94899 0.98081 0.94128 1.20698 0.98039 0.91490 1.04148 1.20614 0.82898 0.88386 0.77957 1.90758 1.29410 1.78518 1.41516 1.46014 1.21228 1.07148 1.63117 1.22490 1.00646 0.79263 0.95723 0.86464 1.23444 1.00568 0.95775 0.98387 1.23002 0.97464 0.97755 0.98211 0.87627 1.21943 0.95986 0.93002 0.87268 1.92787 1.95618 1.73428 1.57894 1.23360 1.00358 0.96995 0.96953 1.20813 0.92237 0.97931 0.99713 1.20898 0.98680 0.97145 0.94402 0.77977 0.86683 1.18105 1.18144 0.83524 0.83982 0.81931 0.85525 0.85502 0.87605 0.87564 0.76354 0.90305 0.89268 0.90491 0.90725 0.89221 0.90128 0.85522 0.85745 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.89 10.88 -35.23 -0.38 -1.27 16 2 C -0.05 -0.04 2.49 36.01 0.09 0.05 16 3 Si 0.71 -0.38 30.82 -169.99 -5.24 -5.62 16 4 C -0.01 -0.03 6.12 -81.68 -0.50 -0.53 16 5 C -0.19 -0.30 9.40 -39.76 -0.37 -0.67 16 6 C -0.19 -0.38 10.86 -39.76 -0.43 -0.81 16 7 C 0.00 -0.01 11.20 -16.64 -0.19 -0.20 16 8 N -0.39 -1.14 2.84 -56.73 -0.16 -1.30 16 9 C 0.13 0.37 4.69 -83.60 -0.39 -0.02 16 10 C -0.12 -0.22 9.76 -39.41 -0.38 -0.61 16 11 C -0.09 -0.10 9.69 -39.61 -0.38 -0.48 16 12 C -0.06 -0.06 4.38 -104.59 -0.46 -0.51 16 13 C -0.10 0.20 5.83 -29.04 -0.17 0.03 16 14 C 0.52 0.26 7.82 -10.99 -0.09 0.17 16 15 O -0.53 -2.69 15.63 5.56 0.09 -2.60 16 16 N -0.72 1.46 5.35 -53.02 -0.28 1.17 16 17 C 0.12 -0.16 4.24 -67.12 -0.28 -0.45 16 18 H 0.12 0.09 7.46 -51.93 -0.39 -0.30 16 19 C -0.14 0.33 7.43 -25.92 -0.19 0.13 16 20 C -0.15 0.31 4.11 -89.81 -0.37 -0.05 16 21 H 0.11 -0.20 8.14 -51.93 -0.42 -0.63 16 22 C 0.07 -0.14 7.33 37.16 0.27 0.13 16 23 F -0.22 -0.36 17.30 2.25 0.04 -0.32 16 24 C -0.14 0.31 7.34 -25.92 -0.19 0.12 16 25 C -0.09 -0.14 9.69 -39.60 -0.38 -0.52 16 26 C -0.09 -0.24 8.48 -39.41 -0.33 -0.57 16 27 H 0.37 -0.07 8.60 45.56 0.39 0.33 16 28 H 0.12 0.00 7.96 -51.93 -0.41 -0.41 16 29 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 30 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 31 H 0.15 -0.13 6.62 -52.48 -0.35 -0.48 16 32 H 0.14 0.04 8.06 -52.49 -0.42 -0.38 16 33 H 0.16 0.14 8.06 -52.48 -0.42 -0.29 16 34 H 0.13 0.12 8.06 -52.48 -0.42 -0.30 16 35 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 36 H 0.11 -0.43 8.08 -51.93 -0.42 -0.85 16 37 H 0.11 -0.41 8.08 -51.93 -0.42 -0.83 16 38 H 0.40 -1.94 8.73 -40.82 -0.36 -2.30 16 39 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 40 H 0.09 -0.29 8.03 -51.93 -0.42 -0.70 16 41 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 42 H 0.07 -0.25 8.05 -51.93 -0.42 -0.67 16 43 H 0.09 -0.29 8.08 -51.93 -0.42 -0.70 16 44 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 45 H 0.13 0.00 8.06 -52.49 -0.42 -0.43 16 46 H 0.12 0.28 8.06 -52.49 -0.42 -0.15 16 LS Contribution 388.52 15.07 5.85 5.85 Total: 0.00 -9.02 388.52 -11.48 -20.50 By element: Atomic # 1 Polarization: -4.99 SS G_CDS: -6.63 Total: -11.63 kcal Atomic # 6 Polarization: -0.03 SS G_CDS: -4.76 Total: -4.79 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -0.45 Total: -0.13 kcal Atomic # 8 Polarization: -3.58 SS G_CDS: -0.30 Total: -3.87 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.04 Total: -0.32 kcal Atomic # 14 Polarization: -0.38 SS G_CDS: -5.24 Total: -5.62 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -9.02 -11.48 -20.50 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_13287746.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.663 kcal (2) G-P(sol) polarization free energy of solvation -9.025 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.362 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.477 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.502 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.839 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds