Wall clock time and date at job start Sun Mar 7 2021 04:47:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86308 * 109.46836 * 2 1 4 4 C 1.50702 * 109.47186 * 240.00337 * 2 1 3 5 5 C 1.34855 * 125.88916 * 119.96981 * 4 2 1 6 6 C 1.40883 * 107.41351 * 180.02562 * 5 4 2 7 7 C 1.34850 * 107.41990 * 0.02562 * 6 5 4 8 8 C 1.50702 * 125.88832 * 179.97438 * 7 6 5 9 9 C 1.50703 * 109.47026 * 85.02636 * 8 7 6 10 10 O 1.21278 * 120.00183 * 359.97438 * 9 8 7 11 11 N 1.34783 * 119.99755 * 179.97438 * 9 8 7 12 12 C 1.46499 * 119.99531 * 180.02562 * 11 9 8 13 13 H 1.08996 * 112.85385 * 23.80181 * 12 11 9 14 14 C 1.53781 * 113.61225 * 155.00207 * 12 11 9 15 15 C 1.53786 * 87.17350 * 139.93836 * 14 12 11 16 16 H 1.08993 * 113.61491 * 89.15923 * 15 14 12 17 17 C 1.52999 * 113.61361 * 220.06273 * 15 14 12 18 18 F 1.39897 * 109.47277 * 184.99876 * 17 15 14 19 19 C 1.53782 * 113.61191 * 252.49880 * 12 11 9 20 20 N 1.36339 * 108.22053 * 0.26136 * 7 6 5 21 21 H 0.96703 * 114.00073 * 59.99888 * 1 2 3 22 22 H 1.09000 * 109.47511 * 119.99598 * 2 1 3 23 23 H 1.48503 * 109.99756 * 60.00097 * 3 2 1 24 24 H 1.48496 * 109.99999 * 181.31730 * 3 2 1 25 25 H 1.07998 * 126.28848 * 0.04419 * 5 4 2 26 26 H 1.08004 * 126.28945 * 179.97438 * 6 5 4 27 27 H 1.08994 * 109.47690 * 325.02144 * 8 7 6 28 28 H 1.09007 * 109.46898 * 205.02117 * 8 7 6 29 29 H 0.96997 * 119.99692 * 0.02562 * 11 9 8 30 30 H 1.09002 * 113.61445 * 254.52836 * 14 12 11 31 31 H 1.09002 * 113.61408 * 25.34566 * 14 12 11 32 32 H 1.09002 * 109.47053 * 305.00261 * 17 15 14 33 33 H 1.09004 * 109.47121 * 64.99898 * 17 15 14 34 34 H 1.08997 * 113.61668 * 334.56642 * 19 12 11 35 35 H 1.08994 * 113.61387 * 105.47377 * 19 12 11 36 36 H 0.96992 * 125.64133 * 179.73872 * 20 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7566 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.7095 -0.1723 -2.1916 6 6 2.9441 -1.1741 -3.1540 7 6 2.3001 -2.2859 -2.7447 8 6 2.2738 -3.6082 -3.4672 9 6 3.4921 -4.4111 -3.0899 10 8 4.3021 -3.9544 -2.3114 11 7 3.6814 -5.6368 -3.6176 12 6 4.8654 -6.4174 -3.2504 13 1 5.2828 -6.1254 -2.2868 14 6 4.6743 -7.9355 -3.4043 15 6 6.1091 -7.9834 -3.9559 16 1 6.8684 -8.1204 -3.1861 17 6 6.2797 -8.9399 -5.1377 18 9 7.6306 -9.0023 -5.4959 19 6 5.9117 -6.5146 -4.3731 20 7 1.6715 -2.0056 -1.5678 21 1 -0.3933 0.4417 -0.7651 22 1 1.7924 -0.5138 0.8900 23 1 1.5614 2.4679 1.2085 24 1 3.5345 1.7705 -0.0321 25 1 3.0841 0.8402 -2.2184 26 1 3.5312 -1.0704 -4.0546 27 1 2.2721 -3.4344 -4.5432 28 1 1.3753 -4.1578 -3.1865 29 1 3.0337 -6.0018 -4.2406 30 1 4.5535 -8.4588 -2.4558 31 1 3.9153 -8.2079 -4.1377 32 1 5.9327 -9.9335 -4.8540 33 1 5.6957 -8.5791 -5.9845 34 1 5.4921 -6.3986 -5.3724 35 1 6.7899 -5.8907 -4.2067 36 1 1.1314 -2.6259 -1.0538 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_14644196.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:47:34 Heat of formation + Delta-G solvation = -56.142170 kcal Electronic energy + Delta-G solvation = -19937.454998 eV Core-core repulsion = 16531.711933 eV Total energy + Delta-G solvation = -3405.743065 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 269.121 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -48.55439 -42.34206 -41.03984 -39.33025 -37.69367 -34.73042 -33.03093 -31.93180 -29.89719 -28.83434 -26.74786 -25.37877 -23.60109 -21.79993 -21.37047 -21.19179 -20.64288 -18.93711 -18.11473 -17.69057 -17.05120 -16.79289 -16.76898 -16.31758 -16.28377 -15.75269 -15.61197 -15.20560 -14.86812 -14.59562 -14.25933 -14.08353 -13.86092 -13.79963 -13.47532 -13.40578 -12.89995 -12.74573 -12.45757 -12.09955 -12.04209 -12.00688 -11.51354 -11.27858 -10.95515 -10.65036 -10.06094 -9.80670 -8.96172 -4.96861 1.10328 1.26167 1.58641 1.68824 1.86507 1.95228 2.30627 2.51709 3.35151 3.41699 3.49932 3.62074 3.66971 3.75275 3.78633 3.99401 4.14499 4.21213 4.22604 4.29755 4.38881 4.48031 4.57128 4.62327 4.69009 4.76793 4.78858 4.81468 4.99736 5.02847 5.24598 5.26863 5.28384 5.55761 5.99137 6.12635 6.53015 6.66569 6.70302 7.26079 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.053 4.053 3 Si 0.811 3.189 4 C -0.021 4.021 5 C -0.203 4.203 6 C -0.201 4.201 7 C 0.033 3.967 8 C -0.066 4.066 9 C 0.509 3.491 10 O -0.582 6.582 11 N -0.706 5.706 12 C 0.116 3.884 13 H 0.086 0.914 14 C -0.118 4.118 15 C -0.144 4.144 16 H 0.093 0.907 17 C 0.067 3.933 18 F -0.242 7.242 19 C -0.147 4.147 20 N -0.537 5.537 21 H 0.397 0.603 22 H 0.100 0.900 23 H -0.292 1.292 24 H -0.295 1.295 25 H 0.151 0.849 26 H 0.140 0.860 27 H 0.146 0.854 28 H 0.131 0.869 29 H 0.421 0.579 30 H 0.083 0.917 31 H 0.118 0.882 32 H 0.094 0.906 33 H 0.095 0.905 34 H 0.103 0.897 35 H 0.053 0.947 36 H 0.419 0.581 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.489 -2.994 -5.371 8.940 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.162 4.162 3 Si 0.715 3.285 4 C -0.134 4.134 5 C -0.228 4.228 6 C -0.226 4.226 7 C -0.081 4.081 8 C -0.106 4.106 9 C 0.296 3.704 10 O -0.462 6.462 11 N -0.358 5.358 12 C 0.011 3.989 13 H 0.104 0.896 14 C -0.156 4.156 15 C -0.163 4.163 16 H 0.111 0.889 17 C 0.012 3.988 18 F -0.223 7.223 19 C -0.186 4.186 20 N -0.132 5.132 21 H 0.248 0.752 22 H 0.117 0.883 23 H -0.220 1.220 24 H -0.222 1.222 25 H 0.168 0.832 26 H 0.158 0.842 27 H 0.163 0.837 28 H 0.148 0.852 29 H 0.259 0.741 30 H 0.102 0.898 31 H 0.136 0.864 32 H 0.112 0.888 33 H 0.113 0.887 34 H 0.121 0.879 35 H 0.072 0.928 36 H 0.256 0.744 Dipole moment (debyes) X Y Z Total from point charges -5.443 -2.502 -3.776 7.082 hybrid contribution 0.204 -1.004 0.402 1.100 sum -5.240 -3.506 -3.374 7.151 Atomic orbital electron populations 1.86439 1.17118 1.82229 1.50723 1.24926 0.85182 1.11271 0.94844 0.93062 0.77290 0.74011 0.84091 1.20970 1.06298 0.86055 1.00106 1.20912 1.04834 1.00770 0.96294 1.20853 1.05771 0.93437 1.02519 1.19938 1.01779 0.96779 0.89640 1.20262 0.96950 0.90115 1.03277 1.21150 0.87593 0.81935 0.79698 1.90756 1.47685 1.70822 1.36901 1.45846 1.25637 1.16521 1.47808 1.22372 0.86444 0.91730 0.98356 0.89560 1.23268 0.95880 0.93367 1.03083 1.22987 0.99335 0.95409 0.98596 0.88874 1.22249 0.76958 1.01733 0.97847 1.92738 1.38052 1.97929 1.93593 1.23611 0.99067 0.95806 1.00067 1.41873 1.40954 1.11116 1.19281 0.75229 0.88297 1.22000 1.22239 0.83170 0.84188 0.83672 0.85152 0.74130 0.89831 0.86375 0.88784 0.88661 0.87862 0.92793 0.74383 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.37 12.88 -148.98 -1.92 -2.29 16 2 C -0.05 -0.10 3.08 71.24 0.22 0.12 16 3 Si 0.81 0.00 30.58 68.60 2.10 2.10 16 4 C -0.02 -0.08 6.51 41.08 0.27 0.18 16 5 C -0.20 -1.01 9.37 22.14 0.21 -0.80 16 6 C -0.20 -1.07 10.76 22.14 0.24 -0.83 16 7 C 0.03 0.08 5.66 41.08 0.23 0.31 16 8 C -0.07 0.35 6.24 29.10 0.18 0.53 16 9 C 0.51 0.63 7.82 87.66 0.69 1.32 16 10 O -0.58 -7.65 15.63 -3.02 -0.05 -7.70 16 11 N -0.71 3.69 5.35 -440.03 -2.36 1.34 16 12 C 0.12 -0.27 4.24 45.52 0.19 -0.08 16 13 H 0.09 0.37 7.46 -2.39 -0.02 0.35 16 14 C -0.12 0.95 7.39 31.12 0.23 1.18 16 15 C -0.14 0.61 4.11 -10.20 -0.04 0.57 16 16 H 0.09 -0.15 8.14 -2.39 -0.02 -0.17 16 17 C 0.07 -0.31 7.39 71.98 0.53 0.22 16 18 F -0.24 -1.09 17.36 44.97 0.78 -0.31 16 19 C -0.15 0.34 7.44 31.18 0.23 0.57 16 20 N -0.54 -1.42 6.07 -171.11 -1.04 -2.46 16 21 H 0.40 -2.88 8.70 -74.06 -0.64 -3.53 16 22 H 0.10 0.37 7.96 -2.39 -0.02 0.35 16 23 H -0.29 -1.75 7.11 99.48 0.71 -1.04 16 24 H -0.30 -1.95 7.11 99.48 0.71 -1.25 16 25 H 0.15 0.24 6.22 -2.91 -0.02 0.22 16 26 H 0.14 0.46 8.06 -2.91 -0.02 0.43 16 27 H 0.15 -1.57 8.14 -2.39 -0.02 -1.59 16 28 H 0.13 -1.48 8.14 -2.38 -0.02 -1.50 16 29 H 0.42 -5.46 8.73 -92.71 -0.81 -6.27 16 30 H 0.08 -0.65 8.14 -2.39 -0.02 -0.66 16 31 H 0.12 -1.55 8.08 -2.39 -0.02 -1.57 16 32 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 33 H 0.10 -0.82 7.85 -2.38 -0.02 -0.84 16 34 H 0.10 -0.56 7.90 -2.39 -0.02 -0.57 16 35 H 0.05 0.14 8.14 -2.39 -0.02 0.12 16 36 H 0.42 -0.33 8.96 -92.71 -0.83 -1.16 16 Total: 0.00 -25.06 310.86 -0.43 -25.49 By element: Atomic # 1 Polarization: -18.34 SS G_CDS: -1.12 Total: -19.46 kcal Atomic # 6 Polarization: 0.12 SS G_CDS: 3.18 Total: 3.30 kcal Atomic # 7 Polarization: 2.27 SS G_CDS: -3.40 Total: -1.12 kcal Atomic # 8 Polarization: -8.02 SS G_CDS: -1.97 Total: -9.99 kcal Atomic # 9 Polarization: -1.09 SS G_CDS: 0.78 Total: -0.31 kcal Atomic # 14 Polarization: 0.00 SS G_CDS: 2.10 Total: 2.10 kcal Total: -25.06 -0.43 -25.49 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_14644196.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.656 kcal (2) G-P(sol) polarization free energy of solvation -25.058 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.714 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.428 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.486 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.142 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds