Wall clock time and date at job start Sun Mar 7 2021 04:47:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.46768 * 2 1 4 4 C 1.50699 * 109.47158 * 240.00413 * 2 1 3 5 5 C 1.38271 * 119.94563 * 119.72381 * 4 2 1 6 6 C 1.38146 * 120.05540 * 179.72476 * 5 4 2 7 7 C 1.38728 * 119.94378 * 0.55158 * 6 5 4 8 8 O 1.35895 * 120.05721 * 179.74753 * 7 6 5 9 9 C 1.42904 * 116.99866 * 359.97438 * 8 7 6 10 10 C 1.50703 * 109.47020 * 179.97438 * 9 8 7 11 11 O 1.21283 * 119.99887 * 359.97438 * 10 9 8 12 12 N 1.34775 * 119.99764 * 179.97438 * 10 9 8 13 13 C 1.46507 * 119.99956 * 180.02562 * 12 10 9 14 14 H 1.09005 * 112.84902 * 334.66797 * 13 12 10 15 15 C 1.53773 * 113.61461 * 105.86028 * 13 12 10 16 16 C 1.53957 * 87.02012 * 139.95388 * 15 13 12 17 17 H 1.08995 * 113.61508 * 89.19990 * 16 15 13 18 18 C 1.52998 * 113.67030 * 220.07143 * 16 15 13 19 19 F 1.39896 * 109.47356 * 162.55688 * 18 16 15 20 20 C 1.53775 * 113.61614 * 203.47158 * 13 12 10 21 21 C 1.38735 * 119.89088 * 359.71936 * 7 6 5 22 22 C 1.38147 * 119.94129 * 0.02562 * 21 7 6 23 23 H 0.96698 * 114.00355 * 60.00074 * 1 2 3 24 24 H 1.09000 * 109.47411 * 120.00061 * 2 1 3 25 25 H 1.48506 * 110.00048 * 60.00575 * 3 2 1 26 26 H 1.48502 * 109.99996 * 181.31901 * 3 2 1 27 27 H 1.08003 * 119.96765 * 359.97438 * 5 4 2 28 28 H 1.08003 * 120.02767 * 180.27535 * 6 5 4 29 29 H 1.08994 * 109.46578 * 299.99532 * 9 8 7 30 30 H 1.08990 * 109.47287 * 60.00031 * 9 8 7 31 31 H 0.96994 * 120.00281 * 359.97438 * 12 10 9 32 32 H 1.08993 * 113.62165 * 254.52926 * 15 13 12 33 33 H 1.09003 * 113.61456 * 25.43480 * 15 13 12 34 34 H 1.09001 * 109.47228 * 282.56074 * 18 16 15 35 35 H 1.09007 * 109.47072 * 42.55878 * 18 16 15 36 36 H 1.09005 * 113.61511 * 334.57014 * 20 13 12 37 37 H 1.09001 * 113.61503 * 105.38616 * 20 13 12 38 38 H 1.07994 * 120.03367 * 180.02562 * 21 7 6 39 39 H 1.07996 * 119.97399 * 179.97438 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7214 -0.0355 -2.1428 6 6 3.1879 -0.6861 -3.2687 7 6 2.8534 -2.0142 -3.4894 8 8 3.3068 -2.6549 -4.5988 9 6 4.1232 -1.8996 -5.4961 10 6 4.5291 -2.7687 -6.6584 11 8 4.1563 -3.9216 -6.7128 12 7 5.3062 -2.2649 -7.6375 13 6 5.7004 -3.1096 -8.7677 14 1 5.7017 -4.1716 -8.5222 15 6 4.9558 -2.7799 -10.0722 16 6 6.2959 -2.9984 -10.7979 17 1 6.4607 -4.0298 -11.1095 18 6 6.5592 -1.9901 -11.9182 19 9 7.9194 -2.0011 -12.2453 20 6 6.9842 -2.6383 -9.4708 21 6 2.0558 -2.6875 -2.5755 22 6 1.5963 -2.0340 -1.4484 23 1 -0.3934 0.4417 -0.7650 24 1 1.7923 -0.5138 0.8900 25 1 1.5614 2.4679 1.2086 26 1 3.5344 1.7704 -0.0321 27 1 2.9775 0.9999 -1.9728 28 1 3.8087 -0.1599 -3.9787 29 1 3.5612 -1.0408 -5.8630 30 1 5.0145 -1.5539 -4.9728 31 1 5.6040 -1.3428 -7.5942 32 1 4.1915 -3.5110 -10.3355 33 1 4.5950 -1.7525 -10.1214 34 1 5.9722 -2.2607 -12.7959 35 1 6.2740 -0.9926 -11.5837 36 1 7.1792 -1.5721 -9.3552 37 1 7.8554 -3.2544 -9.2480 38 1 1.7944 -3.7215 -2.7448 39 1 0.9751 -2.5574 -0.7368 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_2989410.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:47:47 Heat of formation + Delta-G solvation = -100.249563 kcal Electronic energy + Delta-G solvation = -22681.047753 eV Core-core repulsion = 18891.909626 eV Total energy + Delta-G solvation = -3789.138127 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.126 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -48.57955 -41.65764 -40.99757 -39.65884 -38.78437 -37.13243 -34.86226 -32.44872 -31.77691 -30.38734 -28.89915 -26.93105 -26.26517 -24.40749 -23.52789 -22.34712 -21.74603 -20.90421 -19.56281 -18.49829 -18.12530 -17.72424 -17.51142 -17.10219 -16.90039 -16.79120 -16.46475 -16.06760 -15.97698 -15.62023 -15.50652 -15.40487 -14.81306 -14.68891 -14.28202 -13.79890 -13.76603 -13.71533 -13.54212 -13.32073 -13.17171 -12.75264 -12.25020 -12.15134 -12.07518 -11.97986 -11.75773 -11.70083 -11.49685 -10.92516 -10.44438 -10.24307 -10.07879 -9.24430 -5.08107 0.25828 0.26790 1.27289 1.37931 1.39949 1.58702 1.94340 2.48567 2.63229 3.14848 3.20887 3.36092 3.45145 3.46764 3.56755 3.64761 3.69552 3.83190 3.83882 3.84420 3.87733 3.97088 4.06554 4.23377 4.40853 4.43062 4.48294 4.48921 4.58711 4.61259 4.65883 4.77976 4.85060 4.91936 5.04608 5.11688 5.21564 5.33303 5.47598 5.64958 6.16962 6.31194 6.56780 7.01204 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.064 4.064 3 Si 0.687 3.313 4 C -0.157 4.157 5 C -0.076 4.076 6 C -0.206 4.206 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.039 3.961 10 C 0.517 3.483 11 O -0.511 6.511 12 N -0.718 5.718 13 C 0.125 3.875 14 H 0.119 0.881 15 C -0.143 4.143 16 C -0.145 4.145 17 H 0.106 0.894 18 C 0.073 3.927 19 F -0.216 7.216 20 C -0.138 4.138 21 C -0.145 4.145 22 C -0.051 4.051 23 H 0.379 0.621 24 H 0.113 0.887 25 H -0.255 1.255 26 H -0.259 1.259 27 H 0.130 0.870 28 H 0.132 0.868 29 H 0.096 0.904 30 H 0.095 0.905 31 H 0.403 0.597 32 H 0.080 0.920 33 H 0.090 0.910 34 H 0.077 0.923 35 H 0.075 0.925 36 H 0.090 0.910 37 H 0.082 0.918 38 H 0.136 0.864 39 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.405 5.465 -3.131 6.311 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.175 4.175 3 Si 0.589 3.411 4 C -0.158 4.158 5 C -0.094 4.094 6 C -0.225 4.225 7 C 0.088 3.912 8 O -0.201 6.201 9 C -0.039 4.039 10 C 0.301 3.699 11 O -0.385 6.385 12 N -0.371 5.371 13 C 0.021 3.979 14 H 0.137 0.863 15 C -0.182 4.182 16 C -0.164 4.164 17 H 0.125 0.875 18 C 0.018 3.982 19 F -0.197 7.197 20 C -0.176 4.176 21 C -0.164 4.164 22 C -0.069 4.069 23 H 0.226 0.774 24 H 0.130 0.870 25 H -0.180 1.180 26 H -0.184 1.184 27 H 0.147 0.853 28 H 0.149 0.851 29 H 0.114 0.886 30 H 0.113 0.887 31 H 0.238 0.762 32 H 0.099 0.901 33 H 0.108 0.892 34 H 0.096 0.904 35 H 0.093 0.907 36 H 0.109 0.891 37 H 0.100 0.900 38 H 0.154 0.846 39 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 0.695 4.690 -2.236 5.242 hybrid contribution 0.472 0.073 0.060 0.482 sum 1.167 4.763 -2.176 5.366 Atomic orbital electron populations 1.86501 1.17172 1.81690 1.49262 1.24978 0.85188 1.09874 0.97413 0.94823 0.80816 0.78180 0.87260 1.20260 1.01864 0.95600 0.98041 1.20789 0.96280 0.99038 0.93253 1.21168 1.06217 0.94207 1.00913 1.19074 0.94294 0.91084 0.86723 1.86176 1.64267 1.38617 1.30996 1.22483 0.96427 0.94560 0.90467 1.20090 0.78733 0.88093 0.82951 1.90790 1.52899 1.17606 1.77164 1.45815 1.52625 1.15774 1.22927 1.22549 0.94890 0.96908 0.83578 0.86288 1.23487 0.96467 1.03153 0.95082 1.23029 0.97850 1.01157 0.94360 0.87536 1.21937 0.77823 1.00006 0.98428 1.92786 1.34900 1.97914 1.94107 1.23360 0.97305 1.02546 0.94369 1.20543 1.00389 1.01278 0.94178 1.20861 0.96769 0.93429 0.95836 0.77382 0.86963 1.18000 1.18390 0.85314 0.85062 0.88620 0.88712 0.76211 0.90093 0.89157 0.90437 0.90700 0.89129 0.89961 0.84625 0.84728 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.06 12.77 -35.23 -0.45 -0.51 16 2 C -0.06 0.02 2.82 36.01 0.10 0.13 16 3 Si 0.69 -0.95 29.78 -169.99 -5.06 -6.01 16 4 C -0.16 0.00 5.39 -104.60 -0.56 -0.57 16 5 C -0.08 0.07 8.66 -39.60 -0.34 -0.28 16 6 C -0.21 0.15 9.04 -39.43 -0.36 -0.20 16 7 C 0.13 0.18 6.69 -39.22 -0.26 -0.08 16 8 O -0.29 -0.69 9.67 -39.32 -0.38 -1.07 16 9 C 0.04 -0.06 5.22 36.01 0.19 0.13 16 10 C 0.52 0.35 7.91 -10.98 -0.09 0.27 16 11 O -0.51 -2.97 16.12 -14.35 -0.23 -3.21 16 12 N -0.72 1.82 5.36 -53.02 -0.28 1.54 16 13 C 0.13 -0.23 4.21 -67.12 -0.28 -0.51 16 14 H 0.12 0.02 7.50 -51.93 -0.39 -0.37 16 15 C -0.14 0.40 7.45 -25.83 -0.19 0.21 16 16 C -0.14 0.39 4.11 -89.72 -0.37 0.03 16 17 H 0.11 -0.26 8.14 -51.93 -0.42 -0.69 16 18 C 0.07 -0.18 7.33 37.16 0.27 0.10 16 19 F -0.22 -0.26 17.30 2.25 0.04 -0.22 16 20 C -0.14 0.40 7.34 -25.92 -0.19 0.21 16 21 C -0.15 -0.22 9.99 -39.43 -0.39 -0.61 16 22 C -0.05 -0.04 9.60 -39.60 -0.38 -0.42 16 23 H 0.38 -1.41 8.70 45.56 0.40 -1.02 16 24 H 0.11 0.01 7.96 -51.93 -0.41 -0.40 16 25 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 26 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 27 H 0.13 -0.37 4.87 -52.48 -0.26 -0.63 16 28 H 0.13 -0.47 6.30 -52.48 -0.33 -0.80 16 29 H 0.10 -0.41 7.66 -51.93 -0.40 -0.81 16 30 H 0.10 -0.38 7.66 -51.93 -0.40 -0.78 16 31 H 0.40 -2.33 8.71 -40.82 -0.36 -2.69 16 32 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 33 H 0.09 -0.35 8.04 -51.93 -0.42 -0.76 16 34 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 35 H 0.07 -0.29 8.06 -51.93 -0.42 -0.71 16 36 H 0.09 -0.36 8.07 -51.93 -0.42 -0.78 16 37 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 38 H 0.14 0.15 8.06 -52.49 -0.42 -0.27 16 39 H 0.13 0.00 8.06 -52.49 -0.42 -0.42 16 LS Contribution 333.19 15.07 5.02 5.02 Total: 0.00 -9.66 333.19 -9.34 -19.00 By element: Atomic # 1 Polarization: -7.79 SS G_CDS: -5.13 Total: -12.92 kcal Atomic # 6 Polarization: 1.24 SS G_CDS: -2.86 Total: -1.61 kcal Atomic # 7 Polarization: 1.82 SS G_CDS: -0.28 Total: 1.54 kcal Atomic # 8 Polarization: -3.72 SS G_CDS: -1.06 Total: -4.79 kcal Atomic # 9 Polarization: -0.26 SS G_CDS: 0.04 Total: -0.22 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: -5.06 Total: -6.01 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -9.66 -9.34 -19.00 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_2989410.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.251 kcal (2) G-P(sol) polarization free energy of solvation -9.658 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.909 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.340 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.999 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.250 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds