Wall clock time and date at job start Sun Mar 7 2021 04:47:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86302 * 109.47226 * 2 1 4 4 C 1.50700 * 109.47362 * 119.99952 * 2 1 3 5 5 C 1.38246 * 119.97337 * 245.00019 * 4 2 1 6 6 C 1.38294 * 120.11045 * 179.97438 * 5 4 2 7 7 C 1.38112 * 120.05536 * 0.04808 * 6 5 4 8 8 C 1.38756 * 119.94997 * 359.97438 * 7 6 5 9 9 O 1.35898 * 120.05928 * 180.02562 * 8 7 6 10 10 C 1.42899 * 117.00025 * 359.97438 * 9 8 7 11 11 C 1.52995 * 109.47096 * 180.02562 * 10 9 8 12 12 C 1.50705 * 109.47120 * 180.02562 * 11 10 9 13 13 O 1.21276 * 119.99998 * 0.02562 * 12 11 10 14 14 N 1.34785 * 119.99918 * 179.97438 * 12 11 10 15 15 C 1.46497 * 119.99772 * 180.02562 * 14 12 11 16 16 H 1.09001 * 112.85054 * 336.19628 * 15 14 12 17 17 C 1.53777 * 113.61500 * 107.50337 * 15 14 12 18 18 C 1.53786 * 87.08052 * 139.97875 * 17 15 14 19 19 H 1.08998 * 113.68877 * 89.12868 * 18 17 15 20 20 C 1.52997 * 113.61520 * 220.02142 * 18 17 15 21 21 F 1.39905 * 109.47157 * 277.49760 * 20 18 17 22 22 C 1.53775 * 113.61166 * 205.00578 * 15 14 12 23 23 C 1.38168 * 119.97346 * 65.29400 * 4 2 1 24 24 H 0.96696 * 114.00229 * 59.99947 * 1 2 3 25 25 H 1.08995 * 109.47383 * 239.99884 * 2 1 3 26 26 H 1.48500 * 109.99726 * 298.68388 * 3 2 1 27 27 H 1.48496 * 110.00072 * 59.99877 * 3 2 1 28 28 H 1.07998 * 119.94410 * 359.97438 * 5 4 2 29 29 H 1.07997 * 119.96492 * 180.02562 * 6 5 4 30 30 H 1.08003 * 120.02779 * 179.97438 * 7 6 5 31 31 H 1.08996 * 109.47109 * 60.00406 * 10 9 8 32 32 H 1.09008 * 109.47167 * 300.00148 * 10 9 8 33 33 H 1.09000 * 109.47634 * 60.00266 * 11 10 9 34 34 H 1.09004 * 109.47235 * 299.99746 * 11 10 9 35 35 H 0.96998 * 119.99583 * 0.02562 * 14 12 11 36 36 H 1.09005 * 113.61106 * 25.43314 * 17 15 14 37 37 H 1.09001 * 113.61747 * 254.53059 * 17 15 14 38 38 H 1.09001 * 109.46832 * 157.49968 * 20 18 17 39 39 H 1.09004 * 109.47261 * 37.49949 * 20 18 17 40 40 H 1.08996 * 113.61925 * 105.47318 * 22 15 14 41 41 H 1.09000 * 113.61724 * 334.56302 * 22 15 14 42 42 H 1.08001 * 120.02800 * 0.02562 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6387 -0.0116 2.1909 6 6 3.1006 -0.6606 3.3214 7 6 2.8570 -2.0092 3.4930 8 6 2.1476 -2.7129 2.5303 9 8 1.9061 -4.0398 2.6971 10 6 2.4124 -4.6467 3.8876 11 6 2.0456 -6.1320 3.8986 12 6 2.5790 -6.7719 5.1545 13 8 3.1918 -6.1055 5.9614 14 7 2.3741 -8.0847 5.3813 15 6 2.8922 -8.7066 6.6023 16 1 3.7374 -8.1651 7.0274 17 6 1.8004 -9.0519 7.6287 18 6 2.5714 -10.3561 7.8927 19 1 3.3285 -10.2673 8.6718 20 6 1.6668 -11.5758 8.0796 21 9 1.2050 -11.6159 9.3997 22 6 3.1344 -10.2192 6.4681 23 6 1.6898 -2.0608 1.3948 24 1 -0.3933 0.4417 -0.7650 25 1 1.7923 -0.5138 -0.8899 26 1 1.5878 2.4585 -1.2242 27 1 1.5615 2.4679 1.2084 28 1 2.8310 1.0428 2.0582 29 1 3.6527 -0.1124 4.0705 30 1 3.2182 -2.5156 4.3759 31 1 1.9759 -4.1579 4.7586 32 1 3.4969 -4.5405 3.9167 33 1 2.4824 -6.6207 3.0277 34 1 0.9611 -6.2387 3.8694 35 1 1.8837 -8.6175 4.7360 36 1 0.8173 -9.2081 7.1846 37 1 1.7769 -8.3776 8.4848 38 1 2.2312 -12.4831 7.8644 39 1 0.8177 -11.5061 7.3996 40 1 4.1877 -10.4874 6.3874 41 1 2.5160 -10.6946 5.7068 42 1 1.1416 -2.6074 0.6418 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_4549614.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:47:53 Heat of formation + Delta-G solvation = -108.385299 kcal Electronic energy + Delta-G solvation = -24234.633246 eV Core-core repulsion = 20289.604708 eV Total energy + Delta-G solvation = -3945.028538 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -48.55004 -41.45442 -41.04656 -39.61871 -38.91322 -37.37981 -34.81440 -33.26743 -32.52482 -30.82110 -29.47544 -27.01563 -26.93121 -25.64242 -23.59190 -23.41797 -21.88146 -21.55559 -20.81243 -19.10141 -18.52303 -17.95997 -17.74307 -17.46783 -17.15909 -17.14403 -16.88236 -16.83385 -16.06327 -15.82282 -15.79432 -15.62804 -15.44294 -14.63625 -14.47371 -14.33082 -14.23822 -13.87298 -13.71557 -13.57334 -13.40407 -13.01134 -12.95155 -12.91952 -12.62055 -12.30853 -12.14845 -11.89562 -11.77277 -11.69086 -11.59275 -11.40731 -10.97774 -10.51185 -10.18320 -9.82747 -9.15697 -4.94661 0.29900 0.50426 1.27446 1.46879 1.60441 1.68963 1.96711 2.45258 2.71048 3.16919 3.23594 3.36803 3.43643 3.49374 3.58256 3.76422 3.82721 3.88545 3.91690 3.95621 4.01811 4.08770 4.13625 4.25076 4.29565 4.32929 4.43842 4.44901 4.48633 4.55147 4.58838 4.64432 4.70407 4.75227 4.79814 4.89133 5.05606 5.10772 5.34376 5.38002 5.46777 5.55353 5.75698 6.29715 6.43956 6.44315 7.05019 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.077 4.077 3 Si 0.688 3.312 4 C -0.036 4.036 5 C -0.153 4.153 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.132 3.868 9 O -0.317 6.317 10 C 0.074 3.926 11 C -0.142 4.142 12 C 0.522 3.478 13 O -0.537 6.537 14 N -0.719 5.719 15 C 0.123 3.877 16 H 0.119 0.881 17 C -0.147 4.147 18 C -0.145 4.145 19 H 0.107 0.893 20 C 0.073 3.927 21 F -0.216 7.216 22 C -0.137 4.137 23 C -0.125 4.125 24 H 0.380 0.620 25 H 0.078 0.922 26 H -0.261 1.261 27 H -0.255 1.255 28 H 0.129 0.871 29 H 0.131 0.869 30 H 0.133 0.867 31 H 0.072 0.928 32 H 0.073 0.927 33 H 0.108 0.892 34 H 0.107 0.893 35 H 0.404 0.596 36 H 0.088 0.912 37 H 0.078 0.922 38 H 0.077 0.923 39 H 0.075 0.925 40 H 0.082 0.918 41 H 0.091 0.909 42 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.943 -2.977 -3.738 5.158 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.187 4.187 3 Si 0.589 3.411 4 C -0.036 4.036 5 C -0.171 4.171 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.087 3.913 9 O -0.231 6.231 10 C -0.001 4.001 11 C -0.182 4.182 12 C 0.308 3.692 13 O -0.413 6.413 14 N -0.370 5.370 15 C 0.018 3.982 16 H 0.137 0.863 17 C -0.185 4.185 18 C -0.164 4.164 19 H 0.125 0.875 20 C 0.018 3.982 21 F -0.197 7.197 22 C -0.176 4.176 23 C -0.143 4.143 24 H 0.228 0.772 25 H 0.096 0.904 26 H -0.187 1.187 27 H -0.180 1.180 28 H 0.146 0.854 29 H 0.149 0.851 30 H 0.151 0.849 31 H 0.091 0.909 32 H 0.091 0.909 33 H 0.126 0.874 34 H 0.126 0.874 35 H 0.239 0.761 36 H 0.107 0.893 37 H 0.096 0.904 38 H 0.095 0.905 39 H 0.093 0.907 40 H 0.101 0.899 41 H 0.110 0.890 42 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 2.160 -2.101 -2.694 4.042 hybrid contribution -1.316 -0.509 -0.558 1.517 sum 0.844 -2.610 -3.252 4.255 Atomic orbital electron populations 1.86600 1.17661 1.80197 1.49754 1.24837 0.84591 1.11132 0.98130 0.94916 0.91702 0.74356 0.80133 1.18995 0.96998 0.92814 0.94802 1.20913 1.01594 0.99765 0.94783 1.20902 0.97673 0.93658 0.96851 1.21383 1.04157 0.95963 1.00560 1.18914 0.95276 0.82637 0.94506 1.85965 1.74498 1.20309 1.42283 1.22411 0.99702 0.91760 0.86259 1.21481 1.04285 0.95146 0.97293 1.20352 0.79256 0.82210 0.87371 1.90752 1.40750 1.62320 1.47519 1.45944 1.57852 1.09642 1.23607 1.22521 0.97876 0.92703 0.85093 0.86303 1.23548 0.98561 0.96641 0.99777 1.23017 0.99411 0.95311 0.98651 0.87477 1.21968 0.97922 0.98883 0.79401 1.92791 1.90583 1.97744 1.38621 1.23330 1.02654 0.95238 0.96331 1.20211 1.03085 0.93757 0.97270 0.77212 0.90413 1.18676 1.17965 0.85394 0.85064 0.84941 0.90933 0.90862 0.87399 0.87448 0.76143 0.89319 0.90352 0.90470 0.90672 0.89895 0.89037 0.85007 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.96 12.81 -35.23 -0.45 -1.41 16 2 C -0.08 -0.04 2.79 36.01 0.10 0.06 16 3 Si 0.69 -0.36 29.85 -169.99 -5.07 -5.43 16 4 C -0.04 -0.08 5.38 -104.64 -0.56 -0.64 16 5 C -0.15 -0.22 8.67 -39.56 -0.34 -0.56 16 6 C -0.07 -0.09 10.04 -39.61 -0.40 -0.49 16 7 C -0.20 -0.39 9.04 -39.44 -0.36 -0.75 16 8 C 0.13 0.38 6.69 -39.22 -0.26 0.12 16 9 O -0.32 -0.73 10.14 -19.42 -0.20 -0.93 16 10 C 0.07 0.04 4.03 37.16 0.15 0.19 16 11 C -0.14 0.26 6.07 -27.88 -0.17 0.09 16 12 C 0.52 0.06 7.83 -10.98 -0.09 -0.03 16 13 O -0.54 -2.26 15.58 5.56 0.09 -2.17 16 14 N -0.72 1.68 5.35 -53.02 -0.28 1.39 16 15 C 0.12 -0.21 4.24 -67.12 -0.28 -0.50 16 16 H 0.12 0.01 7.46 -51.93 -0.39 -0.37 16 17 C -0.15 0.24 7.43 -25.92 -0.19 0.04 16 18 C -0.14 0.35 4.10 -89.80 -0.37 -0.02 16 19 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 20 C 0.07 -0.15 7.35 37.16 0.27 0.13 16 21 F -0.22 -0.43 17.36 2.25 0.04 -0.39 16 22 C -0.14 0.51 7.39 -25.92 -0.19 0.31 16 23 C -0.12 -0.37 9.63 -39.43 -0.38 -0.75 16 24 H 0.38 -0.90 8.74 45.56 0.40 -0.50 16 25 H 0.08 -0.10 7.96 -51.93 -0.41 -0.51 16 26 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 27 H -0.26 -0.66 7.05 56.52 0.40 -0.27 16 28 H 0.13 -0.04 4.86 -52.49 -0.26 -0.30 16 29 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 30 H 0.13 0.11 6.30 -52.48 -0.33 -0.22 16 31 H 0.07 0.08 7.62 -51.93 -0.40 -0.32 16 32 H 0.07 0.05 7.62 -51.92 -0.40 -0.34 16 33 H 0.11 -0.36 8.14 -51.93 -0.42 -0.79 16 34 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 35 H 0.40 -2.07 8.73 -40.82 -0.36 -2.43 16 36 H 0.09 -0.20 7.96 -51.93 -0.41 -0.61 16 37 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 38 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 39 H 0.08 -0.25 7.94 -51.93 -0.41 -0.67 16 40 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 41 H 0.09 -0.46 8.08 -51.93 -0.42 -0.88 16 42 H 0.13 0.32 8.06 -52.49 -0.42 -0.10 16 LS Contribution 354.16 15.07 5.34 5.34 Total: 0.00 -8.87 354.16 -9.58 -18.45 By element: Atomic # 1 Polarization: -6.09 SS G_CDS: -5.96 Total: -12.05 kcal Atomic # 6 Polarization: 0.27 SS G_CDS: -3.07 Total: -2.80 kcal Atomic # 7 Polarization: 1.68 SS G_CDS: -0.28 Total: 1.39 kcal Atomic # 8 Polarization: -3.95 SS G_CDS: -0.56 Total: -4.51 kcal Atomic # 9 Polarization: -0.43 SS G_CDS: 0.04 Total: -0.39 kcal Atomic # 14 Polarization: -0.36 SS G_CDS: -5.07 Total: -5.43 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -8.87 -9.58 -18.45 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_4549614.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.935 kcal (2) G-P(sol) polarization free energy of solvation -8.873 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.807 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.578 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.451 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.385 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds