Wall clock time and date at job start Sun Mar 7 2021 04:47:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86302 * 109.47226 * 2 1 4 4 C 1.50700 * 109.47362 * 119.99952 * 2 1 3 5 5 C 1.38246 * 119.97337 * 245.00019 * 4 2 1 6 6 C 1.38294 * 120.11045 * 179.97438 * 5 4 2 7 7 C 1.38112 * 120.05536 * 0.04808 * 6 5 4 8 8 C 1.38756 * 119.94997 * 359.97438 * 7 6 5 9 9 O 1.35898 * 120.05928 * 180.02562 * 8 7 6 10 10 C 1.42899 * 117.00025 * 359.97438 * 9 8 7 11 11 C 1.52995 * 109.47096 * 180.02562 * 10 9 8 12 12 C 1.50705 * 109.47120 * 180.02562 * 11 10 9 13 13 O 1.21276 * 119.99998 * 0.02562 * 12 11 10 14 14 N 1.34785 * 119.99918 * 179.97438 * 12 11 10 15 15 C 1.46497 * 119.99772 * 180.02562 * 14 12 11 16 16 H 1.09001 * 112.85054 * 336.19628 * 15 14 12 17 17 C 1.53777 * 113.61500 * 107.50337 * 15 14 12 18 18 C 1.53786 * 87.08052 * 139.97875 * 17 15 14 19 19 H 1.08998 * 113.68877 * 89.12868 * 18 17 15 20 20 C 1.52997 * 113.61520 * 220.02142 * 18 17 15 21 21 F 1.39905 * 109.47157 * 277.49760 * 20 18 17 22 22 C 1.53775 * 113.61166 * 205.00578 * 15 14 12 23 23 C 1.38168 * 119.97346 * 65.29400 * 4 2 1 24 24 H 0.96696 * 114.00229 * 59.99947 * 1 2 3 25 25 H 1.08995 * 109.47383 * 239.99884 * 2 1 3 26 26 H 1.48500 * 109.99726 * 298.68388 * 3 2 1 27 27 H 1.48496 * 110.00072 * 59.99877 * 3 2 1 28 28 H 1.07998 * 119.94410 * 359.97438 * 5 4 2 29 29 H 1.07997 * 119.96492 * 180.02562 * 6 5 4 30 30 H 1.08003 * 120.02779 * 179.97438 * 7 6 5 31 31 H 1.08996 * 109.47109 * 60.00406 * 10 9 8 32 32 H 1.09008 * 109.47167 * 300.00148 * 10 9 8 33 33 H 1.09000 * 109.47634 * 60.00266 * 11 10 9 34 34 H 1.09004 * 109.47235 * 299.99746 * 11 10 9 35 35 H 0.96998 * 119.99583 * 0.02562 * 14 12 11 36 36 H 1.09005 * 113.61106 * 25.43314 * 17 15 14 37 37 H 1.09001 * 113.61747 * 254.53059 * 17 15 14 38 38 H 1.09001 * 109.46832 * 157.49968 * 20 18 17 39 39 H 1.09004 * 109.47261 * 37.49949 * 20 18 17 40 40 H 1.08996 * 113.61925 * 105.47318 * 22 15 14 41 41 H 1.09000 * 113.61724 * 334.56302 * 22 15 14 42 42 H 1.08001 * 120.02800 * 0.02562 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6387 -0.0116 2.1909 6 6 3.1006 -0.6606 3.3214 7 6 2.8570 -2.0092 3.4930 8 6 2.1476 -2.7129 2.5303 9 8 1.9061 -4.0398 2.6971 10 6 2.4124 -4.6467 3.8876 11 6 2.0456 -6.1320 3.8986 12 6 2.5790 -6.7719 5.1545 13 8 3.1918 -6.1055 5.9614 14 7 2.3741 -8.0847 5.3813 15 6 2.8922 -8.7066 6.6023 16 1 3.7374 -8.1651 7.0274 17 6 1.8004 -9.0519 7.6287 18 6 2.5714 -10.3561 7.8927 19 1 3.3285 -10.2673 8.6718 20 6 1.6668 -11.5758 8.0796 21 9 1.2050 -11.6159 9.3997 22 6 3.1344 -10.2192 6.4681 23 6 1.6898 -2.0608 1.3948 24 1 -0.3933 0.4417 -0.7650 25 1 1.7923 -0.5138 -0.8899 26 1 1.5878 2.4585 -1.2242 27 1 1.5615 2.4679 1.2084 28 1 2.8310 1.0428 2.0582 29 1 3.6527 -0.1124 4.0705 30 1 3.2182 -2.5156 4.3759 31 1 1.9759 -4.1579 4.7586 32 1 3.4969 -4.5405 3.9167 33 1 2.4824 -6.6207 3.0277 34 1 0.9611 -6.2387 3.8694 35 1 1.8837 -8.6175 4.7360 36 1 0.8173 -9.2081 7.1846 37 1 1.7769 -8.3776 8.4848 38 1 2.2312 -12.4831 7.8644 39 1 0.8177 -11.5061 7.3996 40 1 4.1877 -10.4874 6.3874 41 1 2.5160 -10.6946 5.7068 42 1 1.1416 -2.6074 0.6418 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_4549614.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:47:52 Heat of formation + Delta-G solvation = -107.813589 kcal Electronic energy + Delta-G solvation = -24234.608455 eV Core-core repulsion = 20289.604708 eV Total energy + Delta-G solvation = -3945.003746 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -48.55111 -41.47733 -41.07395 -39.57595 -38.98363 -37.45518 -34.78941 -33.25217 -32.62180 -30.90068 -29.34567 -27.06555 -26.74614 -25.63697 -23.68738 -23.33174 -21.92799 -21.52928 -20.66791 -19.16483 -18.57839 -17.96768 -17.66953 -17.49220 -17.22432 -17.10133 -16.89109 -16.75429 -16.08468 -15.87550 -15.76743 -15.63072 -15.46200 -14.65496 -14.55112 -14.39970 -14.22888 -13.93966 -13.59244 -13.48079 -13.44602 -12.97330 -12.94612 -12.89522 -12.50077 -12.35604 -12.02177 -11.99347 -11.82670 -11.68231 -11.52311 -11.29421 -11.00200 -10.54224 -10.10739 -9.94205 -9.29109 -4.91469 0.17697 0.37384 1.27833 1.48103 1.60577 1.70363 1.95061 2.48123 2.60754 3.35262 3.37593 3.41800 3.53789 3.63023 3.73211 3.76753 3.82877 3.88467 3.96417 4.08449 4.12684 4.21115 4.21576 4.24108 4.27563 4.35182 4.47183 4.59081 4.62124 4.66423 4.68879 4.75139 4.77742 4.81059 4.95964 4.99277 5.03817 5.22666 5.24896 5.35872 5.43738 5.52706 5.67429 6.30741 6.45565 6.58073 7.14373 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.090 4.090 3 Si 0.772 3.228 4 C -0.047 4.047 5 C -0.160 4.160 6 C -0.076 4.076 7 C -0.211 4.211 8 C 0.117 3.883 9 O -0.323 6.323 10 C 0.073 3.927 11 C -0.133 4.133 12 C 0.520 3.480 13 O -0.586 6.586 14 N -0.704 5.704 15 C 0.116 3.884 16 H 0.095 0.905 17 C -0.149 4.149 18 C -0.143 4.143 19 H 0.097 0.903 20 C 0.066 3.934 21 F -0.241 7.241 22 C -0.118 4.118 23 C -0.141 4.141 24 H 0.396 0.604 25 H 0.097 0.903 26 H -0.284 1.284 27 H -0.298 1.298 28 H 0.144 0.856 29 H 0.154 0.846 30 H 0.138 0.862 31 H 0.061 0.939 32 H 0.067 0.933 33 H 0.130 0.870 34 H 0.125 0.875 35 H 0.420 0.580 36 H 0.099 0.901 37 H 0.056 0.944 38 H 0.094 0.906 39 H 0.093 0.907 40 H 0.087 0.913 41 H 0.115 0.885 42 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.934 -3.787 -5.004 6.566 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.198 4.198 3 Si 0.676 3.324 4 C -0.047 4.047 5 C -0.178 4.178 6 C -0.093 4.093 7 C -0.230 4.230 8 C 0.072 3.928 9 O -0.237 6.237 10 C -0.003 4.003 11 C -0.172 4.172 12 C 0.307 3.693 13 O -0.466 6.466 14 N -0.356 5.356 15 C 0.011 3.989 16 H 0.113 0.887 17 C -0.187 4.187 18 C -0.163 4.163 19 H 0.115 0.885 20 C 0.011 3.989 21 F -0.223 7.223 22 C -0.156 4.156 23 C -0.160 4.160 24 H 0.246 0.754 25 H 0.115 0.885 26 H -0.211 1.211 27 H -0.226 1.226 28 H 0.161 0.839 29 H 0.171 0.829 30 H 0.156 0.844 31 H 0.080 0.920 32 H 0.086 0.914 33 H 0.148 0.852 34 H 0.143 0.857 35 H 0.259 0.741 36 H 0.117 0.883 37 H 0.075 0.925 38 H 0.112 0.888 39 H 0.111 0.889 40 H 0.106 0.894 41 H 0.134 0.866 42 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 2.137 -2.966 -3.997 5.417 hybrid contribution -1.350 -0.247 -0.145 1.380 sum 0.787 -3.212 -4.142 5.300 Atomic orbital electron populations 1.86551 1.18437 1.80796 1.51089 1.25099 0.84174 1.12263 0.98222 0.93968 0.90331 0.71643 0.76412 1.19287 0.97016 0.92781 0.95637 1.21166 1.01397 1.00531 0.94705 1.21224 0.97343 0.93502 0.97272 1.21547 1.04258 0.96494 1.00681 1.19117 0.95762 0.83041 0.94911 1.85944 1.74682 1.20181 1.42890 1.22452 0.99293 0.93129 0.85377 1.21445 1.05372 0.93391 0.96992 1.20686 0.78563 0.82671 0.87372 1.90736 1.43114 1.63532 1.49209 1.45837 1.57100 1.09023 1.23598 1.22469 0.97201 0.93927 0.85326 0.88715 1.23572 0.99220 0.96801 0.99137 1.22959 0.99103 0.94799 0.99403 0.88487 1.22244 0.98845 0.99573 0.78222 1.92739 1.90946 1.97865 1.40737 1.23270 1.03362 0.93165 0.95848 1.20342 1.03759 0.94332 0.97532 0.75371 0.88509 1.21060 1.22598 0.83892 0.82870 0.84413 0.92023 0.91439 0.85236 0.85686 0.74146 0.88253 0.92499 0.88796 0.88851 0.89438 0.86642 0.85140 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.09 12.81 -148.98 -1.91 -4.00 16 2 C -0.09 -0.08 2.79 71.24 0.20 0.12 16 3 Si 0.77 -1.04 29.85 68.60 2.05 1.00 16 4 C -0.05 -0.23 5.38 -19.88 -0.11 -0.33 16 5 C -0.16 -0.48 8.67 22.28 0.19 -0.29 16 6 C -0.08 -0.20 10.04 22.25 0.22 0.03 16 7 C -0.21 -1.03 9.04 22.36 0.20 -0.83 16 8 C 0.12 0.81 6.69 22.51 0.15 0.96 16 9 O -0.32 -1.76 10.14 -92.40 -0.94 -2.70 16 10 C 0.07 0.15 4.03 71.98 0.29 0.44 16 11 C -0.13 0.52 6.07 29.85 0.18 0.70 16 12 C 0.52 0.34 7.83 87.66 0.69 1.02 16 13 O -0.59 -6.00 15.58 -3.02 -0.05 -6.04 16 14 N -0.70 3.61 5.35 -440.04 -2.36 1.25 16 15 C 0.12 -0.36 4.24 45.51 0.19 -0.17 16 16 H 0.09 0.21 7.46 -2.39 -0.02 0.19 16 17 C -0.15 0.40 7.43 31.12 0.23 0.63 16 18 C -0.14 0.69 4.10 -10.26 -0.04 0.65 16 19 H 0.10 -0.28 8.14 -2.39 -0.02 -0.30 16 20 C 0.07 -0.32 7.35 71.98 0.53 0.21 16 21 F -0.24 -1.04 17.36 44.97 0.78 -0.26 16 22 C -0.12 1.01 7.39 31.12 0.23 1.24 16 23 C -0.14 -0.96 9.63 22.37 0.22 -0.75 16 24 H 0.40 -1.91 8.74 -74.06 -0.65 -2.55 16 25 H 0.10 -0.31 7.96 -2.39 -0.02 -0.33 16 26 H -0.28 -0.63 7.11 99.48 0.71 0.07 16 27 H -0.30 -1.74 7.05 99.48 0.70 -1.04 16 28 H 0.14 -0.13 4.86 -2.91 -0.01 -0.15 16 29 H 0.15 -0.40 8.06 -2.91 -0.02 -0.42 16 30 H 0.14 0.42 6.30 -2.91 -0.02 0.40 16 31 H 0.06 0.25 7.62 -2.39 -0.02 0.23 16 32 H 0.07 0.20 7.62 -2.38 -0.02 0.18 16 33 H 0.13 -1.05 8.14 -2.39 -0.02 -1.07 16 34 H 0.13 -0.91 8.14 -2.38 -0.02 -0.93 16 35 H 0.42 -5.05 8.73 -92.71 -0.81 -5.86 16 36 H 0.10 -0.49 7.96 -2.38 -0.02 -0.51 16 37 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 38 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 39 H 0.09 -0.79 7.94 -2.38 -0.02 -0.81 16 40 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 41 H 0.12 -1.50 8.08 -2.39 -0.02 -1.52 16 42 H 0.13 0.78 8.06 -2.91 -0.02 0.76 16 Total: 0.00 -22.82 354.16 0.58 -22.24 By element: Atomic # 1 Polarization: -14.76 SS G_CDS: -0.37 Total: -15.13 kcal Atomic # 6 Polarization: 0.26 SS G_CDS: 3.38 Total: 3.64 kcal Atomic # 7 Polarization: 3.61 SS G_CDS: -2.36 Total: 1.25 kcal Atomic # 8 Polarization: -9.85 SS G_CDS: -2.89 Total: -12.74 kcal Atomic # 9 Polarization: -1.04 SS G_CDS: 0.78 Total: -0.26 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: 2.05 Total: 1.00 kcal Total: -22.82 0.58 -22.24 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_4549614.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.571 kcal (2) G-P(sol) polarization free energy of solvation -22.822 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.393 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.580 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.243 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.814 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds