Wall clock time and date at job start Sun Mar 7 2021 04:47:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86295 * 109.46922 * 2 1 4 4 C 1.50701 * 109.46980 * 239.99999 * 2 1 3 5 5 C 1.38244 * 119.96874 * 120.29327 * 4 2 1 6 6 C 1.38288 * 120.10735 * 180.25379 * 5 4 2 7 7 C 1.38126 * 120.05387 * 359.44975 * 6 5 4 8 8 C 1.38746 * 119.94556 * 0.28104 * 7 6 5 9 9 O 1.35900 * 120.05764 * 180.02562 * 8 7 6 10 10 C 1.42902 * 116.99943 * 359.97438 * 9 8 7 11 11 C 1.53004 * 109.47331 * 180.02562 * 10 9 8 12 12 C 1.52996 * 109.46845 * 179.97438 * 11 10 9 13 13 C 1.50705 * 109.46957 * 179.97438 * 12 11 10 14 14 O 1.21281 * 119.99576 * 0.02562 * 13 12 11 15 15 N 1.34770 * 120.00050 * 180.02562 * 13 12 11 16 16 C 1.46505 * 120.00152 * 179.97438 * 15 13 12 17 17 H 1.09000 * 112.84365 * 25.33558 * 16 15 13 18 18 C 1.53774 * 113.61508 * 156.52899 * 16 15 13 19 19 C 1.53786 * 87.08145 * 139.98774 * 18 16 15 20 20 H 1.08997 * 113.61598 * 89.11443 * 19 18 16 21 21 C 1.53000 * 113.61058 * 219.93640 * 19 18 16 22 22 F 1.39900 * 109.46924 * 184.99645 * 21 19 18 23 23 C 1.53778 * 113.61852 * 254.14051 * 16 15 13 24 24 C 1.38166 * 119.97212 * 299.99951 * 4 2 1 25 25 H 0.96705 * 114.00195 * 59.99789 * 1 2 3 26 26 H 1.08997 * 109.47022 * 119.99963 * 2 1 3 27 27 H 1.48497 * 110.00541 * 298.67979 * 3 2 1 28 28 H 1.48503 * 110.00248 * 60.00061 * 3 2 1 29 29 H 1.07993 * 119.94966 * 0.02562 * 5 4 2 30 30 H 1.08002 * 119.97455 * 179.73146 * 6 5 4 31 31 H 1.08000 * 120.02655 * 180.29782 * 7 6 5 32 32 H 1.09002 * 109.46947 * 300.00698 * 10 9 8 33 33 H 1.08998 * 109.47276 * 60.00138 * 10 9 8 34 34 H 1.08997 * 109.46741 * 300.00019 * 11 10 9 35 35 H 1.08992 * 109.46839 * 60.00090 * 11 10 9 36 36 H 1.08997 * 109.47587 * 299.99649 * 12 11 10 37 37 H 1.09006 * 109.47252 * 60.00333 * 12 11 10 38 38 H 0.97001 * 120.00583 * 0.02562 * 15 13 12 39 39 H 1.09001 * 113.61697 * 254.53336 * 18 16 15 40 40 H 1.09002 * 113.62024 * 25.43454 * 18 16 15 41 41 H 1.08997 * 109.47464 * 304.99482 * 21 19 18 42 42 H 1.09002 * 109.47538 * 64.99998 * 21 19 18 43 43 H 1.09000 * 113.61217 * 334.56304 * 23 16 15 44 44 H 1.09001 * 113.61231 * 105.46886 * 23 16 15 45 45 H 1.08007 * 120.02833 * 0.04906 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7311 -0.0397 -2.1370 6 6 3.1893 -0.6873 -3.2697 7 6 2.8581 -2.0097 -3.4922 8 6 2.0601 -2.6866 -2.5811 9 8 1.7333 -3.9878 -2.7975 10 6 2.2456 -4.5966 -3.9845 11 6 1.7751 -6.0508 -4.0558 12 6 2.3232 -6.7023 -5.3270 13 6 1.8603 -8.1348 -5.3970 14 8 1.1605 -8.5895 -4.5170 15 7 2.2239 -8.9104 -6.4374 16 6 1.7744 -10.3031 -6.5052 17 1 0.8498 -10.4766 -5.9546 18 6 1.7586 -10.8767 -7.9319 19 6 2.3027 -12.1824 -7.3285 20 1 1.5231 -12.8709 -7.0026 21 6 3.3696 -12.8585 -8.1920 22 9 3.7198 -14.0877 -7.6230 23 6 2.8804 -11.3236 -6.1888 24 6 1.5972 -2.0332 -1.4485 25 1 -0.3934 0.4417 -0.7651 26 1 1.7923 -0.5138 0.8900 27 1 1.5879 2.4586 -1.2242 28 1 1.5614 2.4679 1.2085 29 1 2.9954 0.9926 -1.9622 30 1 3.8103 -0.1600 -3.9787 31 1 3.2201 -2.5164 -4.3746 32 1 1.8819 -4.0541 -4.8572 33 1 3.3351 -4.5674 -3.9668 34 1 2.1386 -6.5934 -3.1832 35 1 0.6857 -6.0796 -4.0739 36 1 1.9593 -6.1596 -6.1995 37 1 3.4127 -6.6734 -5.3095 38 1 2.7839 -8.5469 -7.1411 39 1 0.7577 -10.9739 -8.3524 40 1 2.4570 -10.3839 -8.6084 41 1 2.9756 -13.0216 -9.1951 42 1 4.2510 -12.2195 -8.2472 43 1 3.8860 -10.9533 -6.3878 44 1 2.7837 -11.7811 -5.2042 45 1 0.9756 -2.5579 -0.7380 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_4549616.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:47:56 Heat of formation + Delta-G solvation = -116.862844 kcal Electronic energy + Delta-G solvation = -25736.990761 eV Core-core repulsion = 21636.056990 eV Total energy + Delta-G solvation = -4100.933771 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.157 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -48.55003 -41.36481 -41.16349 -39.59580 -39.12832 -37.36664 -34.94717 -34.70846 -32.46441 -31.27650 -29.76672 -28.22967 -26.93731 -26.81418 -24.34147 -23.67397 -22.90162 -21.87056 -21.56668 -20.80689 -19.21172 -18.19272 -17.89574 -17.67081 -17.53696 -17.17008 -17.07331 -16.85564 -16.83834 -16.39773 -16.13338 -15.84074 -15.65023 -15.46469 -14.96761 -14.73071 -14.66312 -14.19071 -14.05366 -13.73814 -13.68426 -13.45128 -13.29857 -13.05622 -12.98423 -12.75807 -12.56320 -12.42457 -12.29154 -12.16480 -11.91821 -11.68962 -11.66778 -11.54953 -11.39454 -10.87728 -10.64101 -10.13407 -9.91253 -9.22231 -4.94586 0.22037 0.42830 1.28006 1.55570 1.61496 1.84440 1.97939 2.30891 2.68522 3.17598 3.24653 3.37867 3.42429 3.52117 3.60340 3.63444 3.75943 3.78578 3.86775 3.92121 4.00805 4.03760 4.05597 4.13864 4.14732 4.20721 4.23863 4.36951 4.42016 4.44153 4.44874 4.56329 4.56766 4.66020 4.72829 4.81189 4.89856 4.92886 4.98660 5.11398 5.15473 5.28812 5.38051 5.42268 5.45186 5.70733 6.37053 6.41602 6.42082 7.14395 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.077 4.077 3 Si 0.689 3.311 4 C -0.079 4.079 5 C -0.156 4.156 6 C -0.074 4.074 7 C -0.205 4.205 8 C 0.132 3.868 9 O -0.311 6.311 10 C 0.060 3.940 11 C -0.106 4.106 12 C -0.138 4.138 13 C 0.515 3.485 14 O -0.533 6.533 15 N -0.723 5.723 16 C 0.123 3.877 17 H 0.117 0.883 18 C -0.137 4.137 19 C -0.145 4.145 20 H 0.107 0.893 21 C 0.073 3.927 22 F -0.216 7.216 23 C -0.147 4.147 24 C -0.126 4.126 25 H 0.376 0.624 26 H 0.120 0.880 27 H -0.260 1.260 28 H -0.257 1.257 29 H 0.129 0.871 30 H 0.130 0.870 31 H 0.129 0.871 32 H 0.064 0.936 33 H 0.065 0.935 34 H 0.084 0.916 35 H 0.083 0.917 36 H 0.098 0.902 37 H 0.098 0.902 38 H 0.402 0.598 39 H 0.082 0.918 40 H 0.091 0.909 41 H 0.077 0.923 42 H 0.075 0.925 43 H 0.088 0.912 44 H 0.077 0.923 45 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.826 2.332 -6.537 8.453 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.187 4.187 3 Si 0.590 3.410 4 C -0.080 4.080 5 C -0.173 4.173 6 C -0.092 4.092 7 C -0.224 4.224 8 C 0.087 3.913 9 O -0.225 6.225 10 C -0.015 4.015 11 C -0.143 4.143 12 C -0.178 4.178 13 C 0.301 3.699 14 O -0.409 6.409 15 N -0.374 5.374 16 C 0.018 3.982 17 H 0.135 0.865 18 C -0.176 4.176 19 C -0.164 4.164 20 H 0.125 0.875 21 C 0.018 3.982 22 F -0.198 7.198 23 C -0.185 4.185 24 C -0.145 4.145 25 H 0.224 0.776 26 H 0.138 0.862 27 H -0.185 1.185 28 H -0.182 1.182 29 H 0.146 0.854 30 H 0.148 0.852 31 H 0.147 0.853 32 H 0.082 0.918 33 H 0.083 0.917 34 H 0.102 0.898 35 H 0.102 0.898 36 H 0.117 0.883 37 H 0.117 0.883 38 H 0.236 0.764 39 H 0.101 0.899 40 H 0.109 0.891 41 H 0.095 0.905 42 H 0.093 0.907 43 H 0.106 0.894 44 H 0.096 0.904 45 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 4.071 2.372 -5.207 7.022 hybrid contribution -0.567 -0.107 -1.220 1.349 sum 3.504 2.265 -6.427 7.663 Atomic orbital electron populations 1.86613 1.17541 1.79985 1.49289 1.25095 0.84102 1.11121 0.98337 0.94919 0.91702 0.74156 0.80196 1.20089 0.97503 0.93824 0.96547 1.20914 1.00856 1.00066 0.95508 1.20909 0.97910 0.93698 0.96662 1.21314 1.03526 0.96477 1.01064 1.19021 0.94425 0.83478 0.94417 1.86089 1.70911 1.22386 1.43095 1.22823 0.98596 0.93893 0.86236 1.21231 1.03026 0.92303 0.97789 1.21539 1.03054 0.92931 1.00301 1.20626 0.79806 0.87960 0.81479 1.90757 1.37133 1.75002 1.37992 1.46003 1.53867 1.12215 1.25359 1.22486 0.98924 0.79605 0.97183 0.86473 1.23324 1.02651 0.95229 0.96348 1.23058 0.99186 0.96551 0.97607 0.87480 1.21974 0.98109 0.81476 0.96593 1.92791 1.93615 1.46229 1.87122 1.23589 0.99126 0.96394 0.99430 1.20277 1.03100 0.93961 0.97141 0.77613 0.86181 1.18510 1.18210 0.85395 0.85218 0.85272 0.91815 0.91726 0.89758 0.89808 0.88348 0.88337 0.76373 0.89949 0.89098 0.90487 0.90669 0.89380 0.90374 0.84786 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.01 12.77 -35.23 -0.45 -1.46 16 2 C -0.08 -0.03 2.82 36.01 0.10 0.08 16 3 Si 0.69 -0.52 29.79 -169.99 -5.06 -5.58 16 4 C -0.08 -0.07 5.39 -104.65 -0.56 -0.64 16 5 C -0.16 0.02 8.67 -39.56 -0.34 -0.32 16 6 C -0.07 0.03 10.04 -39.60 -0.40 -0.36 16 7 C -0.21 -0.04 9.04 -39.43 -0.36 -0.40 16 8 C 0.13 0.27 6.69 -39.22 -0.26 0.01 16 9 O -0.31 -0.73 10.14 -19.42 -0.20 -0.92 16 10 C 0.06 -0.07 4.74 37.16 0.18 0.11 16 11 C -0.11 0.06 4.87 -26.73 -0.13 -0.07 16 12 C -0.14 0.42 5.70 -27.88 -0.16 0.26 16 13 C 0.51 0.06 7.83 -10.99 -0.09 -0.02 16 14 O -0.53 -2.61 15.60 5.56 0.09 -2.52 16 15 N -0.72 1.71 5.36 -53.02 -0.28 1.42 16 16 C 0.12 -0.19 4.21 -67.12 -0.28 -0.47 16 17 H 0.12 0.06 7.50 -51.93 -0.39 -0.33 16 18 C -0.14 0.49 7.39 -25.92 -0.19 0.30 16 19 C -0.14 0.33 4.09 -89.71 -0.37 -0.04 16 20 H 0.11 -0.18 8.14 -51.93 -0.42 -0.60 16 21 C 0.07 -0.15 7.39 37.16 0.27 0.13 16 22 F -0.22 -0.44 17.36 2.25 0.04 -0.40 16 23 C -0.15 0.22 7.45 -25.83 -0.19 0.03 16 24 C -0.13 -0.29 9.55 -39.43 -0.38 -0.66 16 25 H 0.38 -0.36 8.70 45.56 0.40 0.04 16 26 H 0.12 -0.04 7.96 -51.93 -0.41 -0.45 16 27 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 28 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 29 H 0.13 -0.25 4.87 -52.49 -0.26 -0.51 16 30 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 31 H 0.13 -0.25 6.30 -52.49 -0.33 -0.58 16 32 H 0.06 -0.16 7.66 -51.93 -0.40 -0.55 16 33 H 0.06 -0.16 7.66 -51.93 -0.40 -0.56 16 34 H 0.08 0.09 8.10 -51.93 -0.42 -0.33 16 35 H 0.08 0.09 8.10 -51.93 -0.42 -0.33 16 36 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 37 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 38 H 0.40 -2.16 8.71 -40.82 -0.36 -2.52 16 39 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 40 H 0.09 -0.46 8.07 -51.93 -0.42 -0.88 16 41 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 42 H 0.08 -0.25 7.86 -51.93 -0.41 -0.66 16 43 H 0.09 -0.20 7.91 -51.93 -0.41 -0.61 16 44 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 45 H 0.13 0.35 8.06 -52.48 -0.42 -0.07 16 LS Contribution 375.47 15.07 5.66 5.66 Total: 0.00 -9.24 375.47 -10.17 -19.41 By element: Atomic # 1 Polarization: -6.73 SS G_CDS: -6.80 Total: -13.54 kcal Atomic # 6 Polarization: 1.08 SS G_CDS: -3.16 Total: -2.07 kcal Atomic # 7 Polarization: 1.71 SS G_CDS: -0.28 Total: 1.42 kcal Atomic # 8 Polarization: -4.34 SS G_CDS: -0.56 Total: -4.90 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.04 Total: -0.40 kcal Atomic # 14 Polarization: -0.52 SS G_CDS: -5.06 Total: -5.58 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -9.24 -10.17 -19.41 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_4549616.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -97.452 kcal (2) G-P(sol) polarization free energy of solvation -9.241 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.694 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.169 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.411 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.863 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds