Wall clock time and date at job start Sun Mar 7 2021 04:48:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86304 * 109.47123 * 2 1 4 4 C 1.50694 * 109.47552 * 239.99486 * 2 1 3 5 5 C 1.38253 * 119.94543 * 119.97551 * 4 2 1 6 6 C 1.38159 * 120.05637 * 179.77030 * 5 4 2 7 7 C 1.38706 * 119.94487 * 0.48956 * 6 5 4 8 8 O 1.35899 * 120.05784 * 179.79070 * 7 6 5 9 9 C 1.42903 * 117.00040 * 359.72458 * 8 7 6 10 10 C 1.50693 * 109.47071 * 180.02562 * 9 8 7 11 11 O 1.21280 * 120.00552 * 359.97438 * 10 9 8 12 12 N 1.34781 * 119.99995 * 179.97438 * 10 9 8 13 13 C 1.46495 * 120.00320 * 179.97438 * 12 10 9 14 14 H 1.09003 * 112.85229 * 23.80532 * 13 12 10 15 15 C 1.53787 * 113.61698 * 154.99912 * 13 12 10 16 16 C 1.53781 * 87.07987 * 140.06629 * 15 13 12 17 17 H 1.09002 * 113.61228 * 89.11929 * 16 15 13 18 18 C 1.52995 * 113.61293 * 219.93573 * 16 15 13 19 19 F 1.39902 * 109.47433 * 298.47490 * 18 16 15 20 20 C 1.53779 * 113.69143 * 252.53744 * 13 12 10 21 21 C 1.38752 * 119.88798 * 359.51180 * 7 6 5 22 22 N 1.48006 * 120.03010 * 180.22946 * 21 7 6 23 23 O 1.21799 * 120.00252 * 180.02562 * 22 21 7 24 24 O 1.21803 * 119.99615 * 0.02562 * 22 21 7 25 25 C 1.38123 * 119.94741 * 0.25847 * 21 7 6 26 26 H 0.96705 * 114.00061 * 300.00428 * 1 2 3 27 27 H 1.09003 * 109.46987 * 119.99777 * 2 1 3 28 28 H 1.48496 * 109.99755 * 178.67771 * 3 2 1 29 29 H 1.48498 * 109.99812 * 299.99819 * 3 2 1 30 30 H 1.08003 * 119.96513 * 0.03017 * 5 4 2 31 31 H 1.08001 * 120.02904 * 180.26120 * 6 5 4 32 32 H 1.08997 * 109.47241 * 59.99843 * 9 8 7 33 33 H 1.08999 * 109.46426 * 299.99804 * 9 8 7 34 34 H 0.97002 * 119.99641 * 359.97438 * 12 10 9 35 35 H 1.09005 * 113.61051 * 25.52033 * 15 13 12 36 36 H 1.08993 * 113.61359 * 254.62070 * 15 13 12 37 37 H 1.09005 * 109.47494 * 58.47441 * 18 16 15 38 38 H 1.09002 * 109.47422 * 178.47250 * 18 16 15 39 39 H 1.09003 * 113.61775 * 105.46447 * 20 13 12 40 40 H 1.08996 * 113.61960 * 334.55173 * 20 13 12 41 41 H 1.07991 * 119.97776 * 179.97438 * 25 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2303 5 6 2.7258 -0.0374 -2.1399 6 6 3.1916 -0.6879 -3.2662 7 6 2.8533 -2.0145 -3.4893 8 8 3.3067 -2.6553 -4.5986 9 6 4.1228 -1.9000 -5.4961 10 6 4.5277 -2.7689 -6.6589 11 8 4.1547 -3.9216 -6.7134 12 7 5.3046 -2.2650 -7.6383 13 6 5.6987 -3.1098 -8.7684 14 1 5.0125 -3.9400 -8.9358 15 6 6.0295 -2.3173 -10.0441 16 6 7.1901 -3.3026 -10.2608 17 1 6.9117 -4.1855 -10.8362 18 6 8.4699 -2.6389 -10.7731 19 9 8.2232 -2.0482 -12.0170 20 6 7.1779 -3.5294 -8.7398 21 6 2.0559 -2.6878 -2.5749 22 7 1.6971 -4.1048 -2.8073 23 8 0.9968 -4.6952 -2.0046 24 8 2.1024 -4.6805 -3.8012 25 6 1.5966 -2.0344 -1.4480 26 1 -0.3933 0.4418 0.7650 27 1 1.7923 -0.5138 0.8900 28 1 3.5346 1.7703 0.0322 29 1 1.5615 2.4679 -1.2085 30 1 2.9859 0.9966 -1.9676 31 1 3.8156 -0.1629 -3.9743 32 1 5.0142 -1.5540 -4.9729 33 1 3.5606 -1.0414 -5.8631 34 1 5.6027 -1.3430 -7.5949 35 1 6.3549 -1.2950 -9.8509 36 1 5.2558 -2.3788 -10.8093 37 1 8.7914 -1.8747 -10.0653 38 1 9.2527 -3.3904 -10.8766 39 1 7.3313 -4.5696 -8.4523 40 1 7.8172 -2.8386 -8.1902 41 1 0.9756 -2.5579 -0.7363 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_4549638.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:48:15 Heat of formation + Delta-G solvation = -90.064548 kcal Electronic energy + Delta-G solvation = -29029.788727 eV Core-core repulsion = 24410.075820 eV Total energy + Delta-G solvation = -4619.712907 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.120 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -48.58952 -43.03716 -41.81948 -41.14474 -39.92300 -39.02866 -37.58006 -37.13773 -34.89986 -33.57348 -32.50418 -30.64463 -29.07342 -27.62067 -26.93211 -26.70121 -24.53522 -23.52180 -22.68643 -21.82312 -20.95022 -20.41876 -19.49818 -19.16000 -18.72276 -18.45223 -18.32085 -17.81610 -17.68698 -17.42488 -17.09341 -16.81046 -16.64684 -16.13783 -16.03636 -15.81902 -15.65013 -15.39749 -15.02488 -14.59090 -14.41296 -14.15372 -13.89505 -13.74209 -13.46644 -13.18436 -13.06573 -12.87411 -12.76147 -12.54194 -12.22682 -12.21052 -11.96908 -11.81859 -11.74415 -11.72392 -11.50500 -10.98201 -10.95565 -10.66079 -10.26264 -9.89880 -5.24206 -1.15515 -0.39791 0.36217 0.51222 0.97970 1.05069 1.34442 1.36229 1.64274 1.89730 2.15979 2.86581 2.99009 3.06478 3.14297 3.19875 3.32039 3.40561 3.45895 3.50104 3.51417 3.53590 3.64556 3.72478 3.85667 3.96412 4.03189 4.05980 4.12452 4.26177 4.37732 4.41757 4.49002 4.58616 4.64805 4.65799 4.76528 4.84982 4.89429 5.02443 5.29480 5.42370 5.68524 6.19507 6.36950 6.93374 6.97288 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.071 4.071 3 Si 0.691 3.309 4 C -0.111 4.111 5 C -0.032 4.032 6 C -0.208 4.208 7 C 0.200 3.800 8 O -0.252 6.252 9 C 0.030 3.970 10 C 0.515 3.485 11 O -0.494 6.494 12 N -0.718 5.718 13 C 0.126 3.874 14 H 0.122 0.878 15 C -0.137 4.137 16 C -0.145 4.145 17 H 0.107 0.893 18 C 0.073 3.927 19 F -0.216 7.216 20 C -0.143 4.143 21 C -0.074 4.074 22 N 0.029 4.971 23 O -0.174 6.174 24 O -0.118 6.118 25 C 0.013 3.987 26 H 0.388 0.612 27 H 0.083 0.917 28 H -0.251 1.251 29 H -0.247 1.247 30 H 0.140 0.860 31 H 0.156 0.844 32 H 0.101 0.899 33 H 0.102 0.898 34 H 0.402 0.598 35 H 0.090 0.910 36 H 0.082 0.918 37 H 0.074 0.926 38 H 0.077 0.923 39 H 0.081 0.919 40 H 0.089 0.911 41 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.174 9.916 3.525 11.322 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.181 4.181 3 Si 0.591 3.409 4 C -0.113 4.113 5 C -0.049 4.049 6 C -0.227 4.227 7 C 0.150 3.850 8 O -0.162 6.162 9 C -0.049 4.049 10 C 0.298 3.702 11 O -0.366 6.366 12 N -0.372 5.372 13 C 0.021 3.979 14 H 0.139 0.861 15 C -0.176 4.176 16 C -0.164 4.164 17 H 0.125 0.875 18 C 0.018 3.982 19 F -0.197 7.197 20 C -0.182 4.182 21 C -0.158 4.158 22 N 0.549 4.451 23 O -0.384 6.384 24 O -0.341 6.341 25 C -0.006 4.006 26 H 0.236 0.764 27 H 0.101 0.899 28 H -0.176 1.176 29 H -0.172 1.172 30 H 0.157 0.843 31 H 0.174 0.826 32 H 0.119 0.881 33 H 0.119 0.881 34 H 0.237 0.763 35 H 0.108 0.892 36 H 0.101 0.899 37 H 0.092 0.908 38 H 0.096 0.904 39 H 0.100 0.900 40 H 0.108 0.892 41 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 4.558 9.811 2.573 11.119 hybrid contribution 0.233 -0.124 -0.239 0.356 sum 4.790 9.687 2.333 11.056 Atomic orbital electron populations 1.86492 1.16664 1.81994 1.50042 1.24644 0.86305 1.10649 0.96515 0.94647 0.80647 0.77576 0.88013 1.19251 1.01090 0.93219 0.97695 1.21113 0.92897 0.99292 0.91631 1.21197 1.07103 0.92842 1.01530 1.18641 0.90041 0.90670 0.85663 1.86504 1.62868 1.37390 1.29403 1.22748 0.96344 0.94992 0.90813 1.19845 0.79046 0.88167 0.83093 1.90865 1.52325 1.17051 1.76363 1.45785 1.52711 1.15811 1.22855 1.22573 0.95872 0.94842 0.84583 0.86052 1.23359 0.98326 0.98786 0.97087 1.23002 0.95675 1.00370 0.97369 0.87476 1.21934 0.97416 0.97379 0.81461 1.92788 1.95818 1.85971 1.45113 1.23467 0.96873 1.03309 0.94552 1.20577 1.10445 0.84151 1.00657 1.43303 0.99195 1.02189 1.00367 1.94551 1.35147 1.66602 1.42062 1.94698 1.54732 1.67500 1.17215 1.20812 0.93032 0.93479 0.93235 0.76358 0.89928 1.17614 1.17168 0.84274 0.82631 0.88068 0.88052 0.76323 0.89186 0.89931 0.90756 0.90423 0.90023 0.89227 0.81599 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.95 12.74 -35.23 -0.45 0.50 16 2 C -0.07 0.17 2.81 36.00 0.10 0.27 16 3 Si 0.69 -2.65 29.78 -169.99 -5.06 -7.71 16 4 C -0.11 0.00 5.42 -104.60 -0.57 -0.57 16 5 C -0.03 0.04 8.66 -39.60 -0.34 -0.31 16 6 C -0.21 0.30 9.04 -39.44 -0.36 -0.06 16 7 C 0.20 0.38 6.67 -39.22 -0.26 0.12 16 8 O -0.25 -0.74 7.68 -49.78 -0.38 -1.12 16 9 C 0.03 -0.06 5.22 36.00 0.19 0.13 16 10 C 0.51 0.39 7.91 -10.99 -0.09 0.30 16 11 O -0.49 -3.11 16.10 -14.35 -0.23 -3.34 16 12 N -0.72 1.84 5.36 -53.02 -0.28 1.56 16 13 C 0.13 -0.21 4.24 -67.12 -0.28 -0.50 16 14 H 0.12 0.05 7.46 -51.93 -0.39 -0.33 16 15 C -0.14 0.38 7.29 -25.92 -0.19 0.19 16 16 C -0.14 0.37 4.12 -89.81 -0.37 0.00 16 17 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 18 C 0.07 -0.17 7.38 37.16 0.27 0.11 16 19 F -0.22 -0.28 17.24 2.25 0.04 -0.24 16 20 C -0.14 0.38 7.44 -25.92 -0.19 0.19 16 21 C -0.07 -0.29 6.87 -79.81 -0.55 -0.83 16 22 N 0.03 0.21 4.45 34.03 0.15 0.36 16 23 O -0.17 -1.32 18.45 -29.46 -0.54 -1.87 16 24 O -0.12 -1.07 17.24 -36.49 -0.63 -1.69 16 25 C 0.01 0.02 9.12 -39.60 -0.36 -0.34 16 26 H 0.39 -2.59 8.74 45.56 0.40 -2.19 16 27 H 0.08 -0.34 7.96 -51.93 -0.41 -0.75 16 28 H -0.25 0.48 7.11 56.52 0.40 0.89 16 29 H -0.25 0.25 7.11 56.52 0.40 0.65 16 30 H 0.14 -0.38 4.87 -52.48 -0.26 -0.64 16 31 H 0.16 -0.81 6.30 -52.49 -0.33 -1.14 16 32 H 0.10 -0.53 7.65 -51.93 -0.40 -0.92 16 33 H 0.10 -0.50 7.67 -51.93 -0.40 -0.90 16 34 H 0.40 -2.40 8.73 -40.82 -0.36 -2.76 16 35 H 0.09 -0.34 8.08 -51.93 -0.42 -0.76 16 36 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 37 H 0.07 -0.28 7.98 -51.93 -0.41 -0.70 16 38 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 39 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 40 H 0.09 -0.34 7.99 -51.93 -0.41 -0.75 16 41 H 0.17 0.20 7.61 -52.49 -0.40 -0.20 16 LS Contribution 359.06 15.07 5.41 5.41 Total: 0.00 -12.80 359.06 -9.66 -22.46 By element: Atomic # 1 Polarization: -8.34 SS G_CDS: -4.68 Total: -13.02 kcal Atomic # 6 Polarization: 1.72 SS G_CDS: -3.00 Total: -1.28 kcal Atomic # 7 Polarization: 2.05 SS G_CDS: -0.13 Total: 1.92 kcal Atomic # 8 Polarization: -5.30 SS G_CDS: -2.24 Total: -7.53 kcal Atomic # 9 Polarization: -0.28 SS G_CDS: 0.04 Total: -0.24 kcal Atomic # 14 Polarization: -2.65 SS G_CDS: -5.06 Total: -7.71 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -12.80 -9.66 -22.46 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_4549638.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.606 kcal (2) G-P(sol) polarization free energy of solvation -12.804 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.409 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.655 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.459 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.065 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds