Wall clock time and date at job start Sun Mar 7 2021 04:48:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35978 * 116.99684 * 2 1 4 4 C 1.38686 * 119.99787 * 180.02562 * 3 2 1 5 5 C 1.38154 * 119.99824 * 179.97438 * 4 3 2 6 6 C 1.50701 * 119.99441 * 179.97438 * 5 4 3 7 7 O 1.42899 * 109.46966 * 255.01759 * 6 5 4 8 8 Si 1.86296 * 109.47402 * 15.02136 * 6 5 4 9 9 C 1.38674 * 120.00247 * 359.97438 * 5 4 3 10 10 O 1.35978 * 120.00011 * 180.02562 * 9 5 4 11 11 C 1.42897 * 116.99908 * 180.02562 * 10 9 5 12 12 C 1.50705 * 109.47099 * 179.97438 * 11 10 9 13 13 O 1.21276 * 119.99998 * 0.02562 * 12 11 10 14 14 N 1.34785 * 119.99918 * 179.97438 * 12 11 10 15 15 C 1.46497 * 119.99772 * 180.02562 * 14 12 11 16 16 H 1.09007 * 112.90884 * 336.25438 * 15 14 12 17 17 C 1.53777 * 113.61500 * 107.50337 * 15 14 12 18 18 C 1.53786 * 87.08052 * 139.97875 * 17 15 14 19 19 H 1.08998 * 113.68877 * 89.12868 * 18 17 15 20 20 C 1.52997 * 113.61520 * 220.02142 * 18 17 15 21 21 F 1.39905 * 109.47157 * 277.49760 * 20 18 17 22 22 C 1.53775 * 113.61166 * 205.00578 * 15 14 12 23 23 C 1.38722 * 119.99731 * 0.27127 * 9 5 4 24 24 C 1.38113 * 120.00241 * 359.45471 * 23 9 5 25 25 H 1.08998 * 109.47055 * 180.02562 * 1 2 3 26 26 H 1.08998 * 109.46883 * 299.99700 * 1 2 3 27 27 H 1.08997 * 109.47558 * 59.99894 * 1 2 3 28 28 H 1.07995 * 119.99514 * 359.97438 * 4 3 2 29 29 H 1.09004 * 109.46667 * 135.02166 * 6 5 4 30 30 H 0.96707 * 114.00300 * 300.00916 * 7 6 5 31 31 H 1.48497 * 110.00315 * 59.99994 * 8 6 5 32 32 H 1.48505 * 109.99874 * 181.31922 * 8 6 5 33 33 H 1.09000 * 109.47572 * 60.00101 * 11 10 9 34 34 H 1.09004 * 109.47317 * 299.99569 * 11 10 9 35 35 H 0.96998 * 119.99583 * 0.02562 * 14 12 11 36 36 H 1.09005 * 113.61106 * 25.43314 * 17 15 14 37 37 H 1.09001 * 113.61747 * 254.53059 * 17 15 14 38 38 H 1.09001 * 109.46832 * 157.49968 * 20 18 17 39 39 H 1.09004 * 109.47261 * 37.49949 * 20 18 17 40 40 H 1.08996 * 113.61925 * 105.47318 * 22 15 14 41 41 H 1.09003 * 113.69556 * 334.57579 * 22 15 14 42 42 H 1.07995 * 119.99731 * 179.70491 * 23 9 5 43 43 H 1.07997 * 120.00043 * 180.27344 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 3.4312 1.2842 -0.0005 5 6 4.0584 2.5152 -0.0011 6 6 5.5633 2.5940 -0.0011 7 8 6.0207 2.9673 1.3002 8 14 6.2723 0.9322 -0.4555 9 6 3.3031 3.6782 -0.0016 10 8 3.9204 4.8898 -0.0027 11 6 3.0805 6.0458 -0.0026 12 6 3.9347 7.2874 -0.0032 13 8 5.1436 7.1917 -0.0041 14 7 3.3550 8.5043 -0.0038 15 6 4.1853 9.7111 -0.0049 16 1 5.1832 9.5400 0.3991 17 6 4.1848 10.4579 -1.3492 18 6 4.1368 11.7618 -0.5352 19 1 5.1206 12.1526 -0.2756 20 6 3.2145 12.8251 -1.1349 21 9 3.8932 13.5151 -2.1451 22 6 3.4827 10.9428 0.5901 23 6 1.9178 3.6056 0.0041 24 6 1.2908 2.3750 -0.0011 25 1 -0.3633 -1.0276 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8899 28 1 4.0194 0.3785 -0.0005 29 1 5.8881 3.3387 -0.7278 30 1 5.6900 3.8243 1.6026 31 1 5.8041 0.5326 -1.8069 32 1 7.7560 0.9883 -0.4280 33 1 2.4518 6.0383 0.8878 34 1 2.4505 6.0374 -0.8922 35 1 2.3880 8.5807 -0.0034 36 1 3.2896 10.2824 -1.9458 37 1 5.1056 10.3325 -1.9188 38 1 2.9128 13.5255 -0.3561 39 1 2.3303 12.3447 -1.5540 40 1 3.8368 11.2088 1.5861 41 1 2.3955 10.9011 0.5246 42 1 1.3296 4.5113 0.0085 43 1 0.2123 2.3185 -0.0011 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_4974302.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:48:27 Heat of formation + Delta-G solvation = -136.624673 kcal Electronic energy + Delta-G solvation = -27287.168950 eV Core-core repulsion = 23022.233670 eV Total energy + Delta-G solvation = -4264.935281 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.141 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -48.57780 -41.87801 -41.24563 -40.18992 -39.30855 -37.97211 -36.84178 -34.89801 -32.79879 -31.23674 -30.14775 -28.87242 -28.07127 -26.97908 -26.50317 -24.37999 -23.23244 -22.40425 -21.78182 -20.94861 -19.56276 -18.84184 -18.52379 -17.89646 -17.71975 -17.56919 -17.35561 -17.09469 -16.86082 -16.70471 -16.09802 -15.97927 -15.85578 -15.54470 -15.48260 -15.26635 -14.97773 -14.40171 -14.15293 -14.05983 -13.76597 -13.68999 -13.64212 -13.42528 -13.10172 -13.04943 -12.69824 -12.66445 -12.26817 -12.18321 -11.87174 -11.72939 -11.53714 -11.44451 -11.16012 -11.01687 -10.91942 -10.26121 -10.08468 -8.83547 -4.74728 0.06209 0.33480 1.33865 1.36433 1.53237 1.78667 2.14230 2.24414 2.45823 2.54860 3.12563 3.18320 3.31322 3.43546 3.52073 3.54235 3.62963 3.70829 3.79823 3.88842 3.94816 3.98363 4.03971 4.07033 4.10364 4.11145 4.16368 4.32587 4.39138 4.40871 4.42595 4.50915 4.52477 4.63225 4.66125 4.74427 4.85316 5.01509 5.04723 5.09360 5.17197 5.30629 5.39352 6.04213 6.23209 6.37031 6.73417 6.97786 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.313 6.313 3 C 0.104 3.896 4 C -0.103 4.103 5 C -0.098 4.098 6 C -0.072 4.072 7 O -0.533 6.533 8 Si 0.743 3.257 9 C 0.099 3.901 10 O -0.290 6.290 11 C 0.041 3.959 12 C 0.517 3.483 13 O -0.510 6.510 14 N -0.718 5.718 15 C 0.126 3.874 16 H 0.120 0.880 17 C -0.147 4.147 18 C -0.144 4.144 19 H 0.108 0.892 20 C 0.074 3.926 21 F -0.216 7.216 22 C -0.137 4.137 23 C -0.165 4.165 24 C -0.165 4.165 25 H 0.103 0.897 26 H 0.056 0.944 27 H 0.055 0.945 28 H 0.147 0.853 29 H 0.078 0.922 30 H 0.368 0.632 31 H -0.251 1.251 32 H -0.254 1.254 33 H 0.095 0.905 34 H 0.093 0.907 35 H 0.403 0.597 36 H 0.088 0.912 37 H 0.079 0.921 38 H 0.077 0.923 39 H 0.075 0.925 40 H 0.083 0.917 41 H 0.091 0.909 42 H 0.133 0.867 43 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.847 1.203 1.794 9.107 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.227 6.227 3 C 0.058 3.942 4 C -0.121 4.121 5 C -0.099 4.099 6 C -0.181 4.181 7 O -0.339 6.339 8 Si 0.642 3.358 9 C 0.054 3.946 10 O -0.203 6.203 11 C -0.038 4.038 12 C 0.301 3.699 13 O -0.384 6.384 14 N -0.371 5.371 15 C 0.021 3.979 16 H 0.138 0.862 17 C -0.186 4.186 18 C -0.164 4.164 19 H 0.126 0.874 20 C 0.019 3.981 21 F -0.197 7.197 22 C -0.175 4.175 23 C -0.184 4.184 24 C -0.184 4.184 25 H 0.121 0.879 26 H 0.075 0.925 27 H 0.074 0.926 28 H 0.164 0.836 29 H 0.096 0.904 30 H 0.216 0.784 31 H -0.175 1.175 32 H -0.179 1.179 33 H 0.113 0.887 34 H 0.111 0.889 35 H 0.237 0.763 36 H 0.107 0.893 37 H 0.097 0.903 38 H 0.096 0.904 39 H 0.093 0.907 40 H 0.102 0.898 41 H 0.110 0.890 42 H 0.151 0.849 43 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -6.838 -0.034 1.172 6.938 hybrid contribution -1.558 2.147 -0.411 2.685 sum -8.396 2.113 0.761 8.691 Atomic orbital electron populations 1.23101 0.78061 1.04405 1.01316 1.86116 1.21545 1.26165 1.88870 1.18814 0.91912 0.84579 0.98850 1.20063 0.91640 0.96777 1.03590 1.19485 0.96625 0.90032 1.03799 1.25374 0.91484 1.12387 0.88817 1.86709 1.73776 1.41907 1.31463 0.93026 0.79783 0.80224 0.82801 1.18656 0.90828 0.84574 1.00522 1.86113 1.33877 1.11078 1.89278 1.22461 0.93185 0.84149 1.04016 1.20081 0.88870 0.84280 0.76633 1.90793 1.14162 1.86512 1.46899 1.45803 1.10300 1.04959 1.76057 1.22540 0.96510 0.81782 0.97056 0.86173 1.23559 1.03724 0.94240 0.97041 1.23015 1.01076 0.94706 0.97571 0.87403 1.21962 0.94064 0.93699 0.88418 1.92794 1.82423 1.81385 1.63105 1.23333 1.00822 0.94337 0.99002 1.21014 0.92812 0.98688 1.05882 1.21083 1.00329 0.91509 1.05479 0.87858 0.92541 0.92620 0.83622 0.90409 0.78397 1.17515 1.17885 0.88733 0.88873 0.76261 0.89311 0.90270 0.90447 0.90699 0.89799 0.89016 0.84929 0.84694 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.37 10.50 -19.67 -0.21 -0.58 16 3 C 0.10 0.15 6.69 -39.24 -0.26 -0.11 16 4 C -0.10 -0.19 8.59 -39.45 -0.34 -0.52 16 5 C -0.10 -0.24 5.27 -104.49 -0.55 -0.79 16 6 C -0.07 -0.22 2.33 36.01 0.08 -0.14 16 7 O -0.53 -2.08 12.65 -35.23 -0.45 -2.52 16 8 Si 0.74 1.35 30.17 -169.99 -5.13 -3.78 16 9 C 0.10 0.16 6.62 -39.24 -0.26 -0.10 16 10 O -0.29 -0.56 8.56 -39.58 -0.34 -0.90 16 11 C 0.04 -0.07 5.22 36.01 0.19 0.12 16 12 C 0.52 0.23 7.91 -10.98 -0.09 0.14 16 13 O -0.51 -2.79 16.10 -14.35 -0.23 -3.02 16 14 N -0.72 1.96 5.35 -53.02 -0.28 1.68 16 15 C 0.13 -0.24 4.24 -67.12 -0.28 -0.53 16 16 H 0.12 0.01 7.47 -51.93 -0.39 -0.37 16 17 C -0.15 0.27 7.43 -25.92 -0.19 0.08 16 18 C -0.14 0.38 4.10 -89.80 -0.37 0.01 16 19 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 20 C 0.07 -0.17 7.35 37.16 0.27 0.10 16 21 F -0.22 -0.38 17.36 2.25 0.04 -0.34 16 22 C -0.14 0.55 7.39 -25.92 -0.19 0.36 16 23 C -0.17 0.06 9.03 -39.45 -0.36 -0.29 16 24 C -0.17 0.03 9.03 -39.45 -0.36 -0.33 16 25 H 0.10 -0.38 8.14 -51.93 -0.42 -0.81 16 26 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 27 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 28 H 0.15 0.03 5.13 -52.49 -0.27 -0.24 16 29 H 0.08 0.30 7.82 -51.93 -0.41 -0.10 16 30 H 0.37 0.92 8.60 45.56 0.39 1.31 16 31 H -0.25 -0.74 7.11 56.52 0.40 -0.34 16 32 H -0.25 -1.15 7.11 56.52 0.40 -0.75 16 33 H 0.09 -0.41 7.65 -51.93 -0.40 -0.81 16 34 H 0.09 -0.38 7.67 -51.93 -0.40 -0.77 16 35 H 0.40 -2.43 8.73 -40.82 -0.36 -2.79 16 36 H 0.09 -0.23 7.96 -51.93 -0.41 -0.64 16 37 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 38 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 39 H 0.07 -0.28 7.94 -51.93 -0.41 -0.69 16 40 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 41 H 0.09 -0.52 8.08 -51.93 -0.42 -0.94 16 42 H 0.13 -0.45 6.29 -52.49 -0.33 -0.78 16 43 H 0.14 -0.34 6.29 -52.49 -0.33 -0.67 16 LS Contribution 361.59 15.07 5.45 5.45 Total: 0.00 -9.52 361.59 -8.69 -18.21 By element: Atomic # 1 Polarization: -7.29 SS G_CDS: -5.84 Total: -13.12 kcal Atomic # 6 Polarization: 0.64 SS G_CDS: -1.71 Total: -1.07 kcal Atomic # 7 Polarization: 1.96 SS G_CDS: -0.28 Total: 1.68 kcal Atomic # 8 Polarization: -5.80 SS G_CDS: -1.22 Total: -7.02 kcal Atomic # 9 Polarization: -0.38 SS G_CDS: 0.04 Total: -0.34 kcal Atomic # 14 Polarization: 1.35 SS G_CDS: -5.13 Total: -3.78 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -9.52 -8.69 -18.21 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_4974302.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.413 kcal (2) G-P(sol) polarization free energy of solvation -9.518 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.931 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.694 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.212 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.625 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds