Wall clock time and date at job start Sun Mar 7 2021 04:48:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35992 * 117.00044 * 2 1 4 4 C 1.39158 * 120.07380 * 180.02562 * 3 2 1 5 5 O 1.35989 * 120.07062 * 0.02562 * 4 3 2 6 6 C 1.42904 * 117.00003 * 179.97438 * 5 4 3 7 7 C 1.50698 * 109.47209 * 179.97438 * 6 5 4 8 8 O 1.21284 * 120.00119 * 0.02562 * 7 6 5 9 9 N 1.34780 * 120.00142 * 179.97438 * 7 6 5 10 10 C 1.46497 * 120.00267 * 180.02562 * 9 7 6 11 11 H 1.09007 * 112.84877 * 336.19174 * 10 9 7 12 12 C 1.53780 * 113.61566 * 107.50227 * 10 9 7 13 13 C 1.53781 * 87.07885 * 139.98217 * 12 10 9 14 14 H 1.09001 * 113.69468 * 89.12832 * 13 12 10 15 15 C 1.52998 * 113.61221 * 220.01603 * 13 12 10 16 16 F 1.39904 * 109.47587 * 277.49528 * 15 13 12 17 17 C 1.53778 * 87.08411 * 334.56681 * 13 12 10 18 18 C 1.38566 * 119.85189 * 179.97438 * 4 3 2 19 19 C 1.38242 * 120.00253 * 359.97438 * 18 4 3 20 20 C 1.38249 * 120.14424 * 0.02620 * 19 18 4 21 21 C 1.50693 * 119.92305 * 179.97438 * 20 19 18 22 22 O 1.42907 * 109.47661 * 119.99735 * 21 20 19 23 23 Si 1.86298 * 109.47618 * 359.97438 * 21 20 19 24 24 C 1.38238 * 120.14735 * 0.22609 * 20 19 18 25 25 H 1.09000 * 109.46933 * 60.00512 * 1 2 3 26 26 H 1.08997 * 109.47269 * 180.02562 * 1 2 3 27 27 H 1.09000 * 109.47227 * 300.01021 * 1 2 3 28 28 H 1.08997 * 109.47111 * 300.00217 * 6 5 4 29 29 H 1.08996 * 109.47140 * 60.00090 * 6 5 4 30 30 H 0.97000 * 119.99452 * 0.02562 * 9 7 6 31 31 H 1.08998 * 113.61350 * 254.52739 * 12 10 9 32 32 H 1.08999 * 113.61564 * 25.43406 * 12 10 9 33 33 H 1.08998 * 109.47162 * 37.49747 * 15 13 12 34 34 H 1.09005 * 109.47116 * 157.49529 * 15 13 12 35 35 H 1.09002 * 113.61322 * 270.88938 * 17 13 12 36 36 H 1.08997 * 113.69491 * 139.99511 * 17 13 12 37 37 H 1.08007 * 119.99707 * 180.02562 * 18 4 3 38 38 H 1.07996 * 119.92316 * 180.02562 * 19 18 4 39 39 H 1.09000 * 109.46936 * 239.99359 * 21 20 19 40 40 H 0.96697 * 114.00527 * 179.97438 * 22 21 20 41 41 H 1.48506 * 109.99834 * 298.68714 * 23 21 20 42 42 H 1.48502 * 110.00011 * 59.99978 * 23 21 20 43 43 H 1.08008 * 119.99836 * 179.74773 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1795 0.1477 -0.0016 6 6 5.6003 0.3006 -0.0027 7 6 6.2518 -1.0582 -0.0031 8 8 5.5669 -2.0592 -0.0030 9 7 7.5957 -1.1613 -0.0046 10 6 8.2291 -2.4823 -0.0056 11 1 7.5838 -3.2614 0.4005 12 6 8.8760 -2.8543 -1.3502 13 6 10.0313 -3.4613 -0.5368 14 1 9.8807 -4.5090 -0.2765 15 6 11.4121 -3.1911 -1.1377 16 9 11.6719 -4.1238 -2.1476 17 6 9.6476 -2.4857 0.5883 18 6 4.0603 2.5234 -0.0011 19 6 3.3029 3.6799 -0.0016 20 6 1.9224 3.6057 -0.0011 21 6 1.1017 4.8696 -0.0011 22 8 0.2769 4.9021 -1.1676 23 14 2.2365 6.3471 -0.0011 24 6 1.2933 2.3748 0.0047 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0276 0.0005 27 1 -0.3634 0.5140 0.8899 28 1 5.9058 0.8508 -0.8926 29 1 5.9073 0.8500 0.8873 30 1 8.1434 -0.3608 -0.0051 31 1 8.3084 -3.5907 -1.9189 32 1 9.1690 -1.9908 -1.9475 33 1 11.4353 -2.1854 -1.5574 34 1 12.1704 -3.2776 -0.3594 35 1 10.1514 -1.5215 0.5210 36 1 9.7025 -2.9233 1.5851 37 1 5.1386 2.5840 -0.0019 38 1 3.7908 4.6433 -0.0024 39 1 0.4732 4.8946 0.8891 40 1 -0.2804 5.6895 -1.2335 41 1 3.0772 6.3418 1.2231 42 1 3.0992 6.3249 -1.2096 43 1 0.2146 2.3197 0.0093 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_60476.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:48:35 Heat of formation + Delta-G solvation = -129.041562 kcal Electronic energy + Delta-G solvation = -27040.615978 eV Core-core repulsion = 22776.009526 eV Total energy + Delta-G solvation = -4264.606452 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.141 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -48.54082 -41.81110 -41.17616 -39.84768 -38.96930 -38.67210 -37.03481 -34.80851 -32.17229 -31.50197 -30.29444 -28.88480 -28.38370 -26.92451 -26.17091 -24.18367 -23.24026 -22.36600 -21.69587 -20.88713 -19.73132 -18.57626 -18.35097 -18.15556 -17.66844 -17.51601 -17.37606 -17.04880 -16.82809 -16.54182 -16.27399 -15.93857 -15.86326 -15.60685 -15.57972 -15.30124 -14.96861 -14.32947 -14.15145 -14.02629 -13.79487 -13.69577 -13.51335 -13.41059 -12.99594 -12.80325 -12.63760 -12.35663 -12.26068 -12.21038 -12.11954 -12.02940 -11.82087 -11.68084 -11.39000 -10.85846 -10.39304 -10.17901 -9.78025 -8.85624 -5.01628 0.16680 0.26728 1.23013 1.42767 1.46867 1.59143 1.92247 2.31123 2.50783 2.53549 3.17793 3.23831 3.31269 3.39987 3.50067 3.59420 3.67395 3.72852 3.80732 3.89533 3.89959 3.93293 4.02792 4.08893 4.14571 4.21955 4.28519 4.30275 4.41914 4.44699 4.45642 4.54768 4.56538 4.65456 4.71284 4.80238 4.91112 4.96350 5.05371 5.10806 5.36067 5.37674 5.52573 5.95153 6.29913 6.53302 6.57276 7.08276 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.300 6.300 3 C 0.109 3.891 4 C 0.104 3.896 5 O -0.276 6.276 6 C 0.038 3.962 7 C 0.517 3.483 8 O -0.507 6.507 9 N -0.719 5.719 10 C 0.126 3.874 11 H 0.120 0.880 12 C -0.147 4.147 13 C -0.144 4.144 14 H 0.108 0.892 15 C 0.074 3.926 16 F -0.216 7.216 17 C -0.137 4.137 18 C -0.167 4.167 19 C -0.121 4.121 20 C -0.070 4.070 21 C -0.070 4.070 22 O -0.546 6.546 23 Si 0.685 3.315 24 C -0.142 4.142 25 H 0.058 0.942 26 H 0.104 0.896 27 H 0.056 0.944 28 H 0.094 0.906 29 H 0.094 0.906 30 H 0.402 0.598 31 H 0.079 0.921 32 H 0.089 0.911 33 H 0.075 0.925 34 H 0.077 0.923 35 H 0.091 0.909 36 H 0.083 0.917 37 H 0.139 0.861 38 H 0.123 0.877 39 H 0.075 0.925 40 H 0.383 0.617 41 H -0.255 1.255 42 H -0.250 1.250 43 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.943 7.161 2.531 7.653 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.214 6.214 3 C 0.063 3.937 4 C 0.058 3.942 5 O -0.188 6.188 6 C -0.041 4.041 7 C 0.302 3.698 8 O -0.380 6.380 9 N -0.372 5.372 10 C 0.021 3.979 11 H 0.138 0.862 12 C -0.185 4.185 13 C -0.164 4.164 14 H 0.126 0.874 15 C 0.019 3.981 16 F -0.197 7.197 17 C -0.175 4.175 18 C -0.186 4.186 19 C -0.139 4.139 20 C -0.070 4.070 21 C -0.180 4.180 22 O -0.352 6.352 23 Si 0.586 3.414 24 C -0.161 4.161 25 H 0.076 0.924 26 H 0.122 0.878 27 H 0.074 0.926 28 H 0.112 0.888 29 H 0.112 0.888 30 H 0.237 0.763 31 H 0.097 0.903 32 H 0.107 0.893 33 H 0.093 0.907 34 H 0.095 0.905 35 H 0.110 0.890 36 H 0.102 0.898 37 H 0.157 0.843 38 H 0.141 0.859 39 H 0.093 0.907 40 H 0.230 0.770 41 H -0.180 1.180 42 H -0.175 1.175 43 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 1.556 5.701 2.411 6.383 hybrid contribution 0.174 0.163 0.075 0.250 sum 1.730 5.865 2.486 6.600 Atomic orbital electron populations 1.23143 0.78070 1.04446 1.01407 1.86248 1.21399 1.25192 1.88516 1.18257 0.88964 0.85578 1.00881 1.18230 0.88343 0.85642 1.01985 1.86279 1.16005 1.27619 1.88895 1.22493 0.81365 0.96348 1.03939 1.20055 0.82589 0.90517 0.76674 1.90799 1.62606 1.38002 1.46619 1.45799 1.05839 1.09345 1.76262 1.22535 0.92799 0.85528 0.97031 0.86197 1.23556 0.96555 1.01375 0.97063 1.23010 0.94580 1.01176 0.97589 0.87419 1.21961 0.96670 0.91100 0.88406 1.92792 1.95286 1.68506 1.63135 1.23334 0.95128 1.00073 0.98968 1.20921 1.00351 0.90620 1.06723 1.20529 0.92990 0.97568 1.02823 1.19034 0.92694 0.93533 1.01763 1.24660 0.99663 1.02868 0.90831 1.86494 1.58745 1.47777 1.42192 0.95324 0.81111 0.84240 0.80685 1.20915 1.00462 0.90221 1.04496 0.92386 0.87806 0.92561 0.88821 0.88816 0.76298 0.90250 0.89298 0.90696 0.90475 0.89042 0.89832 0.84342 0.85940 0.90719 0.76977 1.17962 1.17472 0.83955 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.02 9.81 101.05 0.99 1.01 16 2 O -0.30 -1.55 10.28 -34.22 -0.35 -1.91 16 3 C 0.11 0.51 6.70 -39.12 -0.26 0.24 16 4 C 0.10 0.43 6.70 -39.12 -0.26 0.17 16 5 O -0.28 -1.36 9.45 -47.33 -0.45 -1.81 16 6 C 0.04 0.01 5.22 36.00 0.19 0.20 16 7 C 0.52 1.11 7.91 -10.99 -0.09 1.02 16 8 O -0.51 -3.76 16.10 -14.35 -0.23 -3.99 16 9 N -0.72 1.09 5.35 -53.02 -0.28 0.81 16 10 C 0.13 -0.13 4.24 -67.12 -0.28 -0.41 16 11 H 0.12 0.13 7.47 -51.93 -0.39 -0.26 16 12 C -0.15 0.16 7.43 -25.92 -0.19 -0.03 16 13 C -0.14 0.29 4.10 -89.81 -0.37 -0.07 16 14 H 0.11 -0.17 8.14 -51.93 -0.42 -0.59 16 15 C 0.07 -0.13 7.35 37.16 0.27 0.14 16 16 F -0.22 -0.48 17.36 2.25 0.04 -0.44 16 17 C -0.14 0.46 7.39 -25.92 -0.19 0.26 16 18 C -0.17 -0.30 9.04 -39.46 -0.36 -0.65 16 19 C -0.12 -0.27 8.66 -39.58 -0.34 -0.62 16 20 C -0.07 -0.18 5.42 -104.62 -0.57 -0.75 16 21 C -0.07 0.01 2.81 36.00 0.10 0.11 16 22 O -0.55 0.00 12.75 -35.23 -0.45 -0.45 16 23 Si 0.69 -0.98 29.78 -169.99 -5.06 -6.04 16 24 C -0.14 -0.43 8.60 -39.46 -0.34 -0.76 16 25 H 0.06 0.00 7.67 -51.93 -0.40 -0.40 16 26 H 0.10 -0.06 8.14 -51.93 -0.42 -0.49 16 27 H 0.06 -0.03 7.65 -51.93 -0.40 -0.43 16 28 H 0.09 -0.23 7.66 -51.93 -0.40 -0.62 16 29 H 0.09 -0.25 7.66 -51.93 -0.40 -0.65 16 30 H 0.40 -1.99 8.73 -40.82 -0.36 -2.35 16 31 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 32 H 0.09 -0.17 7.96 -51.93 -0.41 -0.58 16 33 H 0.07 -0.24 7.94 -51.93 -0.41 -0.65 16 34 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 35 H 0.09 -0.45 8.08 -51.93 -0.42 -0.87 16 36 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 37 H 0.14 -0.22 6.30 -52.48 -0.33 -0.55 16 38 H 0.12 0.14 4.87 -52.49 -0.26 -0.12 16 39 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 40 H 0.38 -1.95 8.74 45.56 0.40 -1.56 16 41 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 42 H -0.25 -0.43 7.11 56.52 0.40 -0.02 16 43 H 0.14 0.19 6.30 -52.48 -0.33 -0.14 16 LS Contribution 362.38 15.07 5.46 5.46 Total: 0.00 -12.04 362.38 -8.85 -20.88 By element: Atomic # 1 Polarization: -6.57 SS G_CDS: -5.82 Total: -12.39 kcal Atomic # 6 Polarization: 1.56 SS G_CDS: -1.70 Total: -0.14 kcal Atomic # 7 Polarization: 1.09 SS G_CDS: -0.28 Total: 0.81 kcal Atomic # 8 Polarization: -6.67 SS G_CDS: -1.48 Total: -8.15 kcal Atomic # 9 Polarization: -0.48 SS G_CDS: 0.04 Total: -0.44 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: -5.06 Total: -6.04 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -12.04 -8.85 -20.88 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_60476.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.157 kcal (2) G-P(sol) polarization free energy of solvation -12.035 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.192 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.850 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.885 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.042 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds