Wall clock time and date at job start Sun Mar 7 2021 04:48:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.38237 * 119.94410 * 300.00207 * 4 2 1 6 6 C 1.38186 * 120.07722 * 180.02562 * 5 4 2 7 7 C 1.38677 * 119.95229 * 359.97438 * 6 5 4 8 8 O 1.35916 * 120.06188 * 179.97438 * 7 6 5 9 9 C 1.42901 * 116.99819 * 0.02562 * 8 7 6 10 10 C 1.50701 * 109.47165 * 179.97438 * 9 8 7 11 11 O 1.21275 * 119.99834 * 0.02562 * 10 9 8 12 12 N 1.34778 * 119.99768 * 179.97438 * 10 9 8 13 13 C 1.46501 * 119.99861 * 179.97438 * 12 10 9 14 14 H 1.09000 * 112.84651 * 334.67330 * 13 12 10 15 15 C 1.53781 * 113.61371 * 105.86716 * 13 12 10 16 16 C 1.53951 * 87.01817 * 139.95144 * 15 13 12 17 17 H 1.09006 * 113.53497 * 89.19408 * 16 15 13 18 18 C 1.53004 * 113.74474 * 220.05533 * 16 15 13 19 19 F 1.39895 * 109.46933 * 162.60252 * 18 16 15 20 20 C 1.53771 * 87.11297 * 334.63928 * 16 15 13 21 21 C 1.38841 * 119.88212 * 0.02562 * 7 6 5 22 22 Br 1.89097 * 120.03520 * 179.97438 * 21 7 6 23 23 C 1.38192 * 119.92549 * 359.72517 * 21 7 6 24 24 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 25 25 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 26 26 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 27 27 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 28 28 H 1.08006 * 119.96202 * 0.02562 * 5 4 2 29 29 H 1.07995 * 120.02789 * 179.97438 * 6 5 4 30 30 H 1.09002 * 109.47015 * 299.99782 * 9 8 7 31 31 H 1.08997 * 109.47242 * 59.99509 * 9 8 7 32 32 H 0.96998 * 119.99989 * 0.02562 * 12 10 9 33 33 H 1.08998 * 113.61853 * 254.53329 * 15 13 12 34 34 H 1.09009 * 113.61162 * 25.43337 * 15 13 12 35 35 H 1.08998 * 109.46823 * 282.60016 * 18 16 15 36 36 H 1.09003 * 109.46762 * 42.60218 * 18 16 15 37 37 H 1.08995 * 113.61555 * 270.80997 * 20 16 15 38 38 H 1.09005 * 113.61560 * 139.90583 * 20 16 15 39 39 H 1.07997 * 119.97512 * 180.26846 * 23 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5965 -2.0338 -1.4483 6 6 2.0560 -2.6879 -2.5754 7 6 2.8534 -2.0156 -3.4894 8 8 3.3070 -2.6570 -4.5985 9 6 2.9230 -4.0240 -4.7600 10 6 3.5142 -4.5644 -6.0365 11 8 4.1974 -3.8495 -6.7386 12 7 3.2844 -5.8425 -6.3974 13 6 3.8586 -6.3677 -7.6386 14 1 4.0577 -5.5894 -8.3754 15 6 5.0442 -7.3209 -7.4139 16 6 4.4657 -8.1799 -8.5529 17 1 4.8320 -7.8978 -9.5401 18 6 4.5533 -9.6855 -8.2947 19 9 3.6773 -10.3576 -9.1538 20 6 3.0948 -7.5745 -8.2085 21 6 3.1885 -0.6864 -3.2689 22 35 4.2761 0.2342 -4.5119 23 6 2.7220 -0.0356 -2.1426 24 1 -0.3934 0.4418 -0.7650 25 1 1.7923 -0.5138 0.8899 26 1 1.5616 2.4678 1.2086 27 1 3.5346 1.7703 -0.0322 28 1 0.9751 -2.5571 -0.7366 29 1 1.7943 -3.7220 -2.7445 30 1 3.2891 -4.6065 -3.9145 31 1 1.8362 -4.0932 -4.8054 32 1 2.7382 -6.4143 -5.8356 33 1 6.0118 -6.8773 -7.6484 34 1 5.0286 -7.8157 -6.4427 35 1 5.5726 -10.0264 -8.4757 36 1 4.2788 -9.8932 -7.2605 37 1 2.5452 -8.1388 -7.4551 38 1 2.4907 -7.3353 -9.0837 39 1 2.9786 0.9996 -1.9725 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_6201210.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:48:38 Heat of formation + Delta-G solvation = -93.297681 kcal Electronic energy + Delta-G solvation = -24761.366795 eV Core-core repulsion = 20632.712122 eV Total energy + Delta-G solvation = -4128.654673 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.036 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -48.58038 -41.78711 -41.09088 -39.74747 -38.88056 -37.29021 -34.86760 -33.50622 -32.23950 -30.75114 -30.04872 -28.91780 -26.93158 -26.45610 -24.47854 -23.50014 -22.45212 -21.76224 -20.91247 -19.65428 -18.59471 -18.20627 -17.73693 -17.61694 -17.19035 -17.03837 -16.79790 -16.55108 -16.12184 -16.02883 -15.74165 -15.70165 -15.49637 -14.91233 -14.79150 -14.32575 -14.14236 -14.02549 -13.73186 -13.49306 -13.41358 -13.18028 -12.76080 -12.50912 -12.33873 -12.19361 -11.97991 -11.85389 -11.82180 -11.70080 -11.49938 -11.07404 -10.93291 -10.54388 -10.24419 -10.04006 -9.33999 -5.09573 -0.09329 0.01162 0.68449 1.21202 1.28148 1.38948 1.57294 1.91651 2.32157 2.37141 3.14446 3.20618 3.31465 3.35704 3.42719 3.45252 3.55510 3.62915 3.66177 3.77867 3.81908 3.87480 3.97014 3.97823 4.06462 4.24293 4.36182 4.42940 4.48456 4.50935 4.58711 4.65541 4.70710 4.77804 4.85038 4.92851 5.04346 5.20324 5.30654 5.36578 5.93914 6.24681 6.47780 7.00495 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.060 4.060 3 Si 0.679 3.321 4 C -0.152 4.152 5 C -0.035 4.035 6 C -0.204 4.204 7 C 0.161 3.839 8 O -0.274 6.274 9 C 0.037 3.963 10 C 0.517 3.483 11 O -0.505 6.505 12 N -0.718 5.718 13 C 0.126 3.874 14 H 0.120 0.880 15 C -0.143 4.143 16 C -0.145 4.145 17 H 0.106 0.894 18 C 0.073 3.927 19 F -0.216 7.216 20 C -0.137 4.137 21 C -0.119 4.119 22 Br -0.023 7.023 23 C -0.050 4.050 24 H 0.380 0.620 25 H 0.117 0.883 26 H -0.250 1.250 27 H -0.254 1.254 28 H 0.138 0.862 29 H 0.139 0.861 30 H 0.097 0.903 31 H 0.098 0.902 32 H 0.403 0.597 33 H 0.080 0.920 34 H 0.090 0.910 35 H 0.077 0.923 36 H 0.075 0.925 37 H 0.090 0.910 38 H 0.082 0.918 39 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.664 -3.301 1.630 4.544 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.171 4.171 3 Si 0.581 3.419 4 C -0.153 4.153 5 C -0.054 4.054 6 C -0.224 4.224 7 C 0.112 3.888 8 O -0.185 6.185 9 C -0.042 4.042 10 C 0.301 3.699 11 O -0.378 6.378 12 N -0.372 5.372 13 C 0.022 3.978 14 H 0.138 0.862 15 C -0.182 4.182 16 C -0.164 4.164 17 H 0.125 0.875 18 C 0.018 3.982 19 F -0.197 7.197 20 C -0.176 4.176 21 C -0.199 4.199 22 Br 0.062 6.938 23 C -0.069 4.069 24 H 0.228 0.772 25 H 0.134 0.866 26 H -0.175 1.175 27 H -0.178 1.178 28 H 0.155 0.845 29 H 0.157 0.843 30 H 0.115 0.885 31 H 0.116 0.884 32 H 0.238 0.762 33 H 0.099 0.901 34 H 0.108 0.892 35 H 0.096 0.904 36 H 0.093 0.907 37 H 0.109 0.891 38 H 0.101 0.899 39 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.063 -2.049 1.440 2.720 hybrid contribution -0.536 -1.417 0.769 1.699 sum -1.598 -3.466 2.209 4.410 Atomic orbital electron populations 1.86506 1.16951 1.81644 1.49382 1.24927 0.85292 1.09906 0.96996 0.94772 0.81460 0.78109 0.87591 1.20255 1.01534 0.95534 0.98001 1.20940 0.95515 0.93287 0.95611 1.21286 1.03191 1.01283 0.96626 1.18635 0.92889 0.90791 0.86438 1.86282 1.69510 1.23793 1.38932 1.22563 1.01218 0.82693 0.97724 1.19997 0.81135 0.82185 0.86591 1.90808 1.36851 1.57222 1.52960 1.45807 1.54285 1.11877 1.25196 1.22547 0.93953 0.94887 0.86462 0.86245 1.23490 0.99353 0.96843 0.98521 1.23030 0.98166 0.94275 1.00939 0.87535 1.21933 0.93067 0.90308 0.92880 1.92786 1.71989 1.81845 1.73077 1.23358 0.96555 0.95785 1.01865 1.21000 1.06683 0.93300 0.98958 1.96818 1.65509 1.74659 1.56786 1.20857 0.95286 0.99407 0.91355 0.77223 0.86599 1.17506 1.17844 0.84455 0.84314 0.88521 0.88429 0.76249 0.90093 0.89195 0.90445 0.90716 0.89137 0.89936 0.84051 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.47 12.77 -35.23 -0.45 0.02 16 2 C -0.06 0.07 2.82 36.01 0.10 0.17 16 3 Si 0.68 -0.86 29.78 -169.99 -5.06 -5.93 16 4 C -0.15 0.10 5.39 -104.60 -0.56 -0.46 16 5 C -0.04 0.04 9.60 -39.60 -0.38 -0.34 16 6 C -0.20 0.26 9.04 -39.44 -0.36 -0.10 16 7 C 0.16 0.19 6.68 -39.20 -0.26 -0.08 16 8 O -0.27 -0.57 9.01 -39.39 -0.35 -0.92 16 9 C 0.04 -0.07 5.22 36.01 0.19 0.12 16 10 C 0.52 0.23 7.91 -10.98 -0.09 0.14 16 11 O -0.51 -2.81 16.12 -14.35 -0.23 -3.04 16 12 N -0.72 1.93 5.36 -53.02 -0.28 1.64 16 13 C 0.13 -0.24 4.21 -67.12 -0.28 -0.52 16 14 H 0.12 0.01 7.50 -51.93 -0.39 -0.38 16 15 C -0.14 0.39 7.45 -25.83 -0.19 0.20 16 16 C -0.14 0.39 4.10 -89.72 -0.37 0.02 16 17 H 0.11 -0.26 8.14 -51.93 -0.42 -0.68 16 18 C 0.07 -0.17 7.34 37.16 0.27 0.10 16 19 F -0.22 -0.27 17.30 2.25 0.04 -0.23 16 20 C -0.14 0.41 7.34 -25.93 -0.19 0.22 16 21 C -0.12 -0.22 6.24 -39.37 -0.25 -0.46 16 22 Br -0.02 -0.07 33.16 -68.01 -2.26 -2.33 16 23 C -0.05 -0.01 8.40 -39.58 -0.33 -0.34 16 24 H 0.38 -1.72 8.70 45.56 0.40 -1.32 16 25 H 0.12 -0.12 7.96 -51.93 -0.41 -0.53 16 26 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 27 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 28 H 0.14 -0.32 8.06 -52.48 -0.42 -0.75 16 29 H 0.14 -0.57 6.30 -52.49 -0.33 -0.91 16 30 H 0.10 -0.44 7.66 -51.93 -0.40 -0.84 16 31 H 0.10 -0.45 7.66 -51.93 -0.40 -0.85 16 32 H 0.40 -2.38 8.71 -40.82 -0.36 -2.73 16 33 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 34 H 0.09 -0.34 8.05 -51.92 -0.42 -0.75 16 35 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 36 H 0.07 -0.29 8.06 -51.93 -0.42 -0.71 16 37 H 0.09 -0.36 8.07 -51.93 -0.42 -0.78 16 38 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 39 H 0.14 -0.16 4.87 -52.49 -0.26 -0.42 16 LS Contribution 353.63 15.07 5.33 5.33 Total: 0.00 -9.56 353.63 -10.68 -20.24 By element: Atomic # 1 Polarization: -8.75 SS G_CDS: -4.71 Total: -13.46 kcal Atomic # 6 Polarization: 1.37 SS G_CDS: -2.70 Total: -1.33 kcal Atomic # 7 Polarization: 1.93 SS G_CDS: -0.28 Total: 1.64 kcal Atomic # 8 Polarization: -2.90 SS G_CDS: -1.04 Total: -3.94 kcal Atomic # 9 Polarization: -0.27 SS G_CDS: 0.04 Total: -0.23 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.06 Total: -5.93 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.26 Total: -2.33 kcal Total LS contribution 5.33 Total: 5.33 kcal Total: -9.56 -10.68 -20.24 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_6201210.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.060 kcal (2) G-P(sol) polarization free energy of solvation -9.557 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.618 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.680 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.237 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.298 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds