Wall clock time and date at job start Sun Mar 7 2021 04:48:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.38237 * 119.94410 * 300.00207 * 4 2 1 6 6 C 1.38186 * 120.07722 * 180.02562 * 5 4 2 7 7 C 1.38677 * 119.95229 * 359.97438 * 6 5 4 8 8 O 1.35916 * 120.06188 * 179.97438 * 7 6 5 9 9 C 1.42901 * 116.99819 * 0.02562 * 8 7 6 10 10 C 1.50701 * 109.47165 * 179.97438 * 9 8 7 11 11 O 1.21275 * 119.99834 * 0.02562 * 10 9 8 12 12 N 1.34778 * 119.99768 * 179.97438 * 10 9 8 13 13 C 1.46501 * 119.99861 * 179.97438 * 12 10 9 14 14 H 1.09000 * 112.84651 * 334.67330 * 13 12 10 15 15 C 1.53781 * 113.61371 * 105.86716 * 13 12 10 16 16 C 1.53951 * 87.01817 * 139.95144 * 15 13 12 17 17 H 1.09006 * 113.53497 * 89.19408 * 16 15 13 18 18 C 1.53004 * 113.74474 * 220.05533 * 16 15 13 19 19 F 1.39895 * 109.46933 * 162.60252 * 18 16 15 20 20 C 1.53771 * 87.11297 * 334.63928 * 16 15 13 21 21 C 1.38841 * 119.88212 * 0.02562 * 7 6 5 22 22 Br 1.89097 * 120.03520 * 179.97438 * 21 7 6 23 23 C 1.38192 * 119.92549 * 359.72517 * 21 7 6 24 24 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 25 25 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 26 26 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 27 27 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 28 28 H 1.08006 * 119.96202 * 0.02562 * 5 4 2 29 29 H 1.07995 * 120.02789 * 179.97438 * 6 5 4 30 30 H 1.09002 * 109.47015 * 299.99782 * 9 8 7 31 31 H 1.08997 * 109.47242 * 59.99509 * 9 8 7 32 32 H 0.96998 * 119.99989 * 0.02562 * 12 10 9 33 33 H 1.08998 * 113.61853 * 254.53329 * 15 13 12 34 34 H 1.09009 * 113.61162 * 25.43337 * 15 13 12 35 35 H 1.08998 * 109.46823 * 282.60016 * 18 16 15 36 36 H 1.09003 * 109.46762 * 42.60218 * 18 16 15 37 37 H 1.08995 * 113.61555 * 270.80997 * 20 16 15 38 38 H 1.09005 * 113.61560 * 139.90583 * 20 16 15 39 39 H 1.07997 * 119.97512 * 180.26846 * 23 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5965 -2.0338 -1.4483 6 6 2.0560 -2.6879 -2.5754 7 6 2.8534 -2.0156 -3.4894 8 8 3.3070 -2.6570 -4.5985 9 6 2.9230 -4.0240 -4.7600 10 6 3.5142 -4.5644 -6.0365 11 8 4.1974 -3.8495 -6.7386 12 7 3.2844 -5.8425 -6.3974 13 6 3.8586 -6.3677 -7.6386 14 1 4.0577 -5.5894 -8.3754 15 6 5.0442 -7.3209 -7.4139 16 6 4.4657 -8.1799 -8.5529 17 1 4.8320 -7.8978 -9.5401 18 6 4.5533 -9.6855 -8.2947 19 9 3.6773 -10.3576 -9.1538 20 6 3.0948 -7.5745 -8.2085 21 6 3.1885 -0.6864 -3.2689 22 35 4.2761 0.2342 -4.5119 23 6 2.7220 -0.0356 -2.1426 24 1 -0.3934 0.4418 -0.7650 25 1 1.7923 -0.5138 0.8899 26 1 1.5616 2.4678 1.2086 27 1 3.5346 1.7703 -0.0322 28 1 0.9751 -2.5571 -0.7366 29 1 1.7943 -3.7220 -2.7445 30 1 3.2891 -4.6065 -3.9145 31 1 1.8362 -4.0932 -4.8054 32 1 2.7382 -6.4143 -5.8356 33 1 6.0118 -6.8773 -7.6484 34 1 5.0286 -7.8157 -6.4427 35 1 5.5726 -10.0264 -8.4757 36 1 4.2788 -9.8932 -7.2605 37 1 2.5452 -8.1388 -7.4551 38 1 2.4907 -7.3353 -9.0837 39 1 2.9786 0.9996 -1.9725 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_6201210.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:48:37 Heat of formation + Delta-G solvation = -92.739935 kcal Electronic energy + Delta-G solvation = -24761.342610 eV Core-core repulsion = 20632.712122 eV Total energy + Delta-G solvation = -4128.630488 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.036 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -48.53258 -41.72727 -41.00902 -39.65608 -38.85147 -37.20487 -34.82890 -33.49154 -32.15459 -30.68552 -30.00001 -28.74967 -26.72410 -26.37312 -24.37324 -23.38238 -22.37718 -21.70014 -20.73017 -19.56448 -18.50787 -18.10482 -17.65195 -17.50694 -17.10863 -16.89432 -16.69515 -16.46915 -16.03467 -15.91775 -15.69215 -15.63459 -15.47913 -14.84651 -14.77858 -14.29159 -14.08630 -13.94155 -13.48842 -13.41914 -13.33557 -13.08955 -12.61305 -12.40591 -12.24578 -12.19649 -11.86921 -11.86636 -11.79627 -11.52367 -11.35618 -11.20608 -10.95215 -10.46464 -10.15075 -10.00005 -9.31413 -5.03395 -0.03685 0.08067 0.63413 1.28673 1.40845 1.42863 1.59118 1.92828 2.39941 2.50711 3.33569 3.40072 3.47287 3.49087 3.56017 3.66088 3.74400 3.78870 3.83966 4.02653 4.07055 4.08781 4.10131 4.18522 4.26797 4.34495 4.46318 4.62089 4.64578 4.68741 4.78677 4.78983 4.83627 4.97598 5.03489 5.04052 5.20558 5.30026 5.44925 5.51406 6.05248 6.44568 6.77431 7.12667 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.052 4.052 3 Si 0.744 3.256 4 C -0.151 4.151 5 C -0.033 4.033 6 C -0.194 4.194 7 C 0.149 3.851 8 O -0.305 6.305 9 C 0.033 3.967 10 C 0.512 3.488 11 O -0.569 6.569 12 N -0.699 5.699 13 C 0.118 3.882 14 H 0.092 0.908 15 C -0.135 4.135 16 C -0.144 4.144 17 H 0.097 0.903 18 C 0.068 3.932 19 F -0.237 7.237 20 C -0.128 4.128 21 C -0.141 4.141 22 Br -0.050 7.050 23 C -0.055 4.055 24 H 0.396 0.604 25 H 0.118 0.882 26 H -0.293 1.293 27 H -0.289 1.289 28 H 0.156 0.844 29 H 0.173 0.827 30 H 0.130 0.870 31 H 0.130 0.870 32 H 0.422 0.578 33 H 0.068 0.932 34 H 0.108 0.892 35 H 0.086 0.914 36 H 0.096 0.904 37 H 0.109 0.891 38 H 0.074 0.926 39 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.151 -5.281 3.012 7.362 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.164 4.164 3 Si 0.652 3.348 4 C -0.153 4.153 5 C -0.052 4.052 6 C -0.213 4.213 7 C 0.101 3.899 8 O -0.217 6.217 9 C -0.044 4.044 10 C 0.298 3.702 11 O -0.447 6.447 12 N -0.353 5.353 13 C 0.013 3.987 14 H 0.110 0.890 15 C -0.174 4.174 16 C -0.163 4.163 17 H 0.115 0.885 18 C 0.013 3.987 19 F -0.218 7.218 20 C -0.166 4.166 21 C -0.221 4.221 22 Br 0.035 6.965 23 C -0.075 4.075 24 H 0.246 0.754 25 H 0.136 0.864 26 H -0.220 1.220 27 H -0.216 1.216 28 H 0.173 0.827 29 H 0.191 0.809 30 H 0.147 0.853 31 H 0.148 0.852 32 H 0.260 0.740 33 H 0.086 0.914 34 H 0.126 0.874 35 H 0.104 0.896 36 H 0.114 0.886 37 H 0.128 0.872 38 H 0.093 0.907 39 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -2.593 -4.075 2.817 5.592 hybrid contribution -0.086 -0.822 0.376 0.908 sum -2.679 -4.898 3.193 6.431 Atomic orbital electron populations 1.86475 1.16744 1.81965 1.50629 1.24819 0.85441 1.09242 0.96899 0.93970 0.78401 0.77043 0.85435 1.20301 1.01249 0.96020 0.97706 1.21205 0.95146 0.92957 0.95846 1.21606 1.01657 1.02595 0.95487 1.18806 0.93543 0.90649 0.86862 1.86244 1.70245 1.25697 1.39528 1.22848 1.02972 0.81405 0.97213 1.20554 0.80237 0.82450 0.86923 1.90786 1.39895 1.58929 1.55071 1.45673 1.53536 1.11234 1.24860 1.22468 0.95141 0.94588 0.86455 0.89025 1.23448 0.98245 0.96338 0.99326 1.22972 0.98385 0.94353 1.00594 0.88451 1.22152 0.93149 0.89900 0.93503 1.92742 1.72786 1.82331 1.73976 1.23339 0.96341 0.95005 1.01956 1.21148 1.07572 0.94075 0.99263 1.96774 1.66471 1.75253 1.57969 1.20921 0.95565 0.99761 0.91217 0.75380 0.86426 1.22047 1.21601 0.82650 0.80945 0.85279 0.85213 0.73952 0.91354 0.87384 0.89622 0.88585 0.87229 0.90696 0.83678 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.79 12.77 -148.98 -1.90 -0.12 16 2 C -0.05 0.17 2.82 71.24 0.20 0.37 16 3 Si 0.74 -1.45 29.78 68.60 2.04 0.60 16 4 C -0.15 0.37 5.39 -19.85 -0.11 0.26 16 5 C -0.03 0.16 9.60 22.26 0.21 0.37 16 6 C -0.19 0.97 9.04 22.36 0.20 1.18 16 7 C 0.15 0.25 6.68 22.52 0.15 0.40 16 8 O -0.30 -1.25 9.01 -73.57 -0.66 -1.91 16 9 C 0.03 -0.18 5.22 71.24 0.37 0.19 16 10 C 0.51 0.48 7.91 87.66 0.69 1.17 16 11 O -0.57 -7.51 16.12 16.02 0.26 -7.26 16 12 N -0.70 4.33 5.36 -440.05 -2.36 1.97 16 13 C 0.12 -0.40 4.21 45.52 0.19 -0.21 16 14 H 0.09 0.24 7.50 -2.39 -0.02 0.22 16 15 C -0.13 0.77 7.45 31.18 0.23 1.00 16 16 C -0.14 0.78 4.10 -10.21 -0.04 0.74 16 17 H 0.10 -0.37 8.14 -2.38 -0.02 -0.38 16 18 C 0.07 -0.38 7.34 71.98 0.53 0.15 16 19 F -0.24 -0.52 17.30 44.97 0.78 0.26 16 20 C -0.13 0.82 7.34 31.12 0.23 1.05 16 21 C -0.14 -0.59 6.24 22.40 0.14 -0.45 16 22 Br -0.05 -0.39 33.16 -20.37 -0.68 -1.07 16 23 C -0.06 -0.02 8.40 22.27 0.19 0.16 16 24 H 0.40 -4.19 8.70 -74.05 -0.64 -4.84 16 25 H 0.12 -0.38 7.96 -2.39 -0.02 -0.40 16 26 H -0.29 -1.50 7.11 99.48 0.71 -0.80 16 27 H -0.29 -1.10 7.11 99.48 0.71 -0.39 16 28 H 0.16 -1.26 8.06 -2.91 -0.02 -1.28 16 29 H 0.17 -2.16 6.30 -2.91 -0.02 -2.18 16 30 H 0.13 -1.58 7.66 -2.39 -0.02 -1.60 16 31 H 0.13 -1.59 7.66 -2.39 -0.02 -1.61 16 32 H 0.42 -5.99 8.71 -92.71 -0.81 -6.80 16 33 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 34 H 0.11 -1.00 8.05 -2.38 -0.02 -1.02 16 35 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 36 H 0.10 -0.94 8.06 -2.39 -0.02 -0.96 16 37 H 0.11 -1.11 8.07 -2.39 -0.02 -1.13 16 38 H 0.07 -0.34 8.14 -2.38 -0.02 -0.36 16 39 H 0.15 -0.21 4.87 -2.91 -0.01 -0.22 16 Total: 0.00 -26.09 353.63 0.37 -25.72 By element: Atomic # 1 Polarization: -24.28 SS G_CDS: -0.30 Total: -24.58 kcal Atomic # 6 Polarization: 3.19 SS G_CDS: 3.19 Total: 6.38 kcal Atomic # 7 Polarization: 4.33 SS G_CDS: -2.36 Total: 1.97 kcal Atomic # 8 Polarization: -6.97 SS G_CDS: -2.31 Total: -9.28 kcal Atomic # 9 Polarization: -0.52 SS G_CDS: 0.78 Total: 0.26 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: 2.04 Total: 0.60 kcal Atomic # 35 Polarization: -0.39 SS G_CDS: -0.68 Total: -1.07 kcal Total: -26.09 0.37 -25.72 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_6201210.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.015 kcal (2) G-P(sol) polarization free energy of solvation -26.093 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.108 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.368 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.725 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.740 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds