Wall clock time and date at job start Sun Mar 7 2021 04:48:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86298 * 109.47054 * 2 1 4 4 C 1.50704 * 109.47038 * 120.00045 * 2 1 3 5 5 C 1.35454 * 125.56199 * 245.02207 * 4 2 1 6 6 C 1.39841 * 107.85897 * 179.71966 * 5 4 2 7 7 C 1.37872 * 107.08792 * 0.42025 * 6 5 4 8 8 C 1.46673 * 126.23145 * 179.85075 * 7 6 5 9 9 O 1.21691 * 120.00251 * 359.68509 * 8 7 6 10 10 N 1.34778 * 119.99684 * 179.69121 * 8 7 6 11 11 C 1.46502 * 119.99671 * 180.02562 * 10 8 7 12 12 H 1.08998 * 112.90669 * 336.24268 * 11 10 8 13 13 C 1.53778 * 113.61780 * 107.50275 * 11 10 8 14 14 C 1.53778 * 87.08449 * 139.97851 * 13 11 10 15 15 H 1.09000 * 113.61263 * 89.11673 * 14 13 11 16 16 C 1.52997 * 113.61422 * 220.01977 * 14 13 11 17 17 F 1.39895 * 109.47137 * 162.49641 * 16 14 13 18 18 C 1.53784 * 87.08081 * 334.56700 * 14 13 11 19 19 N 1.35528 * 125.56182 * 64.99965 * 4 2 1 20 20 H 0.96699 * 113.99776 * 299.99873 * 1 2 3 21 21 H 1.09004 * 109.47254 * 239.99646 * 2 1 3 22 22 H 1.48498 * 110.00162 * 299.99522 * 3 2 1 23 23 H 1.48493 * 109.99907 * 61.32199 * 3 2 1 24 24 H 1.07997 * 126.06746 * 359.97438 * 5 4 2 25 25 H 1.08003 * 126.45101 * 180.26566 * 6 5 4 26 26 H 0.97000 * 120.00419 * 359.97438 * 10 8 7 27 27 H 1.08999 * 113.61111 * 254.52914 * 13 11 10 28 28 H 1.09004 * 113.61682 * 25.42310 * 13 11 10 29 29 H 1.09008 * 109.46869 * 282.49634 * 16 14 13 30 30 H 1.08997 * 109.47357 * 42.49432 * 16 14 13 31 31 H 1.09004 * 113.61451 * 270.88641 * 18 14 13 32 32 H 1.08994 * 113.61477 * 139.97943 * 18 14 13 33 33 H 0.97004 * 125.68352 * 0.02562 * 19 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6326 -0.1392 2.2388 6 6 2.9018 -1.1296 3.1887 7 6 2.3530 -2.3032 2.7171 8 6 2.3936 -3.6087 3.3843 9 8 2.9568 -3.7269 4.4566 10 7 1.8072 -4.6776 2.8098 11 6 1.8472 -5.9815 3.4765 12 1 2.6808 -6.0768 4.1723 13 6 0.4958 -6.4110 4.0714 14 6 0.8174 -7.8305 3.5750 15 1 1.3694 -8.4312 4.2979 16 6 -0.3914 -8.5639 2.9905 17 9 0.0474 -9.6460 2.2201 18 6 1.7113 -7.1712 2.5115 19 7 1.7548 -2.0250 1.5090 20 1 -0.3933 0.4417 0.7651 21 1 1.7924 -0.5139 -0.8900 22 1 1.5616 2.4679 -1.2085 23 1 1.5880 2.4585 1.2242 24 1 2.9276 0.8979 2.3003 25 1 3.4405 -1.0000 4.1158 26 1 1.3579 -4.5834 1.9552 27 1 0.4507 -6.3280 5.1573 28 1 -0.3631 -5.9590 3.5754 29 1 -1.0228 -8.9274 3.8014 30 1 -0.9632 -7.8798 2.3636 31 1 1.1847 -6.9270 1.5888 32 1 2.6475 -7.7018 2.3380 33 1 1.2851 -2.6637 0.9499 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_6580494.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:48:43 Heat of formation + Delta-G solvation = -51.767475 kcal Electronic energy + Delta-G solvation = -18455.979991 eV Core-core repulsion = 15205.964246 eV Total energy + Delta-G solvation = -3250.015745 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 255.106 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -48.56485 -42.55180 -40.93876 -39.26517 -37.82140 -34.93133 -32.19098 -31.45173 -29.46652 -26.93060 -26.76463 -24.29233 -22.61469 -21.49807 -21.43567 -20.79270 -19.72130 -18.18793 -17.73900 -17.00385 -16.80557 -16.64234 -16.49057 -16.08918 -15.74320 -15.63353 -15.17933 -14.99480 -14.51522 -14.37013 -13.99402 -13.66363 -13.55168 -13.41350 -13.11204 -12.66794 -12.34231 -11.91712 -11.84967 -11.56880 -11.45491 -11.23836 -10.83189 -10.27301 -10.08795 -9.30636 -4.82559 0.27091 1.22571 1.52941 1.69904 1.88611 1.99325 2.20870 2.23649 3.30480 3.34915 3.35936 3.58551 3.59931 3.69614 3.78740 4.06394 4.14494 4.22141 4.24601 4.31508 4.50423 4.61015 4.62772 4.74008 4.79532 4.90460 4.95839 4.99510 5.09981 5.15355 5.42502 5.57872 5.77694 6.25892 6.39910 6.43708 7.00236 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.063 4.063 3 Si 0.793 3.207 4 C 0.033 3.967 5 C -0.206 4.206 6 C -0.118 4.118 7 C -0.064 4.064 8 C 0.589 3.411 9 O -0.571 6.571 10 N -0.706 5.706 11 C 0.117 3.883 12 H 0.100 0.900 13 C -0.135 4.135 14 C -0.140 4.140 15 H 0.103 0.897 16 C 0.067 3.933 17 F -0.236 7.236 18 C -0.131 4.131 19 N -0.511 5.511 20 H 0.390 0.610 21 H 0.135 0.865 22 H -0.299 1.299 23 H -0.282 1.282 24 H 0.166 0.834 25 H 0.145 0.855 26 H 0.410 0.590 27 H 0.073 0.927 28 H 0.102 0.898 29 H 0.088 0.912 30 H 0.092 0.908 31 H 0.103 0.897 32 H 0.077 0.923 33 H 0.428 0.572 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.422 1.098 -3.361 3.811 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.171 4.171 3 Si 0.697 3.303 4 C -0.086 4.086 5 C -0.230 4.230 6 C -0.145 4.145 7 C -0.178 4.178 8 C 0.378 3.622 9 O -0.451 6.451 10 N -0.357 5.357 11 C 0.012 3.988 12 H 0.118 0.882 13 C -0.174 4.174 14 C -0.159 4.159 15 H 0.121 0.879 16 C 0.013 3.987 17 F -0.218 7.218 18 C -0.169 4.169 19 N -0.109 5.109 20 H 0.239 0.761 21 H 0.153 0.847 22 H -0.227 1.227 23 H -0.208 1.208 24 H 0.183 0.817 25 H 0.163 0.837 26 H 0.246 0.754 27 H 0.092 0.908 28 H 0.120 0.880 29 H 0.106 0.894 30 H 0.110 0.890 31 H 0.121 0.879 32 H 0.095 0.905 33 H 0.268 0.732 Dipole moment (debyes) X Y Z Total from point charges -1.222 1.321 -3.238 3.704 hybrid contribution -1.358 -0.607 0.135 1.494 sum -2.581 0.714 -3.103 4.098 Atomic orbital electron populations 1.86580 1.18104 1.80522 1.50439 1.25062 0.83599 1.12170 0.96310 0.93272 0.90247 0.70185 0.76624 1.21261 1.03725 0.84170 0.99426 1.20951 1.06192 1.00882 0.94942 1.21497 1.01400 0.91004 1.00552 1.20307 1.10940 0.95369 0.91201 1.17287 0.77759 0.83081 0.84097 1.90842 1.46181 1.85097 1.22940 1.45761 1.56705 1.08375 1.24825 1.22560 0.99139 0.80832 0.96259 0.88196 1.23412 0.97822 0.94182 1.01963 1.22936 0.97522 0.96125 0.99362 0.87898 1.22150 0.96135 0.85594 0.94842 1.92743 1.91725 1.59030 1.78266 1.23358 1.00991 0.94787 0.97793 1.41891 1.42526 1.09609 1.16865 0.76062 0.84712 1.22651 1.20805 0.81653 0.83704 0.75351 0.90810 0.87971 0.89375 0.88980 0.87851 0.90452 0.73226 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.46 12.88 -148.98 -1.92 -0.46 16 2 C -0.06 0.34 3.08 71.24 0.22 0.56 16 3 Si 0.79 -4.34 30.56 68.60 2.10 -2.25 16 4 C 0.03 -0.10 6.46 41.35 0.27 0.17 16 5 C -0.21 0.19 9.32 22.01 0.21 0.39 16 6 C -0.12 -0.43 10.65 22.57 0.24 -0.19 16 7 C -0.06 -0.17 7.06 40.35 0.28 0.12 16 8 C 0.59 3.18 7.79 86.45 0.67 3.85 16 9 O -0.57 -8.12 16.48 -4.32 -0.07 -8.19 16 10 N -0.71 1.40 5.35 -444.00 -2.38 -0.98 16 11 C 0.12 -0.18 4.24 45.52 0.19 0.01 16 12 H 0.10 0.32 7.46 -2.39 -0.02 0.31 16 13 C -0.14 0.59 7.43 31.12 0.23 0.82 16 14 C -0.14 0.64 4.11 -10.27 -0.04 0.60 16 15 H 0.10 -0.38 8.14 -2.39 -0.02 -0.40 16 16 C 0.07 -0.31 7.33 71.98 0.53 0.22 16 17 F -0.24 -0.71 17.30 44.97 0.78 0.07 16 18 C -0.13 0.62 7.34 31.12 0.23 0.85 16 19 N -0.51 1.73 5.99 -171.93 -1.03 0.70 16 20 H 0.39 -2.80 8.70 -74.06 -0.64 -3.44 16 21 H 0.14 -1.11 7.96 -2.39 -0.02 -1.13 16 22 H -0.30 -0.59 7.11 99.48 0.71 0.12 16 23 H -0.28 0.25 7.11 99.48 0.71 0.96 16 24 H 0.17 -0.79 6.19 -2.91 -0.02 -0.81 16 25 H 0.15 0.64 8.06 -2.91 -0.02 0.62 16 26 H 0.41 -3.41 7.86 -92.71 -0.73 -4.14 16 27 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 28 H 0.10 -0.71 8.04 -2.38 -0.02 -0.73 16 29 H 0.09 -0.59 8.14 -2.38 -0.02 -0.61 16 30 H 0.09 -0.75 8.05 -2.39 -0.02 -0.77 16 31 H 0.10 -0.79 8.08 -2.39 -0.02 -0.80 16 32 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 33 H 0.43 -3.75 8.19 -92.71 -0.76 -4.51 16 Total: 0.00 -19.08 288.74 -0.43 -19.50 By element: Atomic # 1 Polarization: -14.87 SS G_CDS: -0.93 Total: -15.80 kcal Atomic # 6 Polarization: 4.36 SS G_CDS: 3.03 Total: 7.39 kcal Atomic # 7 Polarization: 3.13 SS G_CDS: -3.41 Total: -0.27 kcal Atomic # 8 Polarization: -6.65 SS G_CDS: -1.99 Total: -8.64 kcal Atomic # 9 Polarization: -0.71 SS G_CDS: 0.78 Total: 0.07 kcal Atomic # 14 Polarization: -4.34 SS G_CDS: 2.10 Total: -2.25 kcal Total: -19.08 -0.43 -19.50 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_6580494.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.263 kcal (2) G-P(sol) polarization free energy of solvation -19.079 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.342 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.425 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.504 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.767 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds