Wall clock time and date at job start Sun Mar 7 2021 04:48:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.46858 * 2 1 4 4 C 1.50693 * 109.47661 * 239.99225 * 2 1 3 5 5 C 1.38237 * 119.94208 * 300.00368 * 4 2 1 6 6 C 1.38193 * 120.07646 * 179.97438 * 5 4 2 7 7 C 1.38665 * 119.95605 * 0.02562 * 6 5 4 8 8 O 1.35928 * 120.05918 * 179.97438 * 7 6 5 9 9 C 1.42902 * 116.99439 * 359.97438 * 8 7 6 10 10 C 1.53005 * 109.46613 * 180.02562 * 9 8 7 11 11 N 1.46502 * 109.46963 * 179.97438 * 10 9 8 12 12 C 1.34817 * 126.59070 * 124.99953 * 11 10 9 13 13 C 1.36599 * 106.83742 * 179.97438 * 12 11 10 14 14 C 1.47518 * 125.77128 * 180.02562 * 13 12 11 15 15 O 1.21594 * 120.00262 * 359.97438 * 14 13 12 16 16 N 1.34783 * 120.00000 * 179.97438 * 14 13 12 17 17 C 1.46499 * 120.00105 * 180.02562 * 16 14 13 18 18 H 1.09005 * 112.84500 * 336.19178 * 17 16 14 19 19 C 1.53778 * 113.61600 * 107.50116 * 17 16 14 20 20 C 1.53786 * 87.07768 * 139.98243 * 19 17 16 21 21 H 1.08998 * 113.61100 * 89.12300 * 20 19 17 22 22 C 1.52999 * 113.68828 * 220.00641 * 20 19 17 23 23 F 1.39897 * 109.47299 * 162.53307 * 22 20 19 24 24 C 1.53779 * 113.61351 * 205.00433 * 17 16 14 25 25 N 1.34401 * 108.45774 * 0.02562 * 13 12 11 26 26 N 1.28759 * 109.52635 * 359.74605 * 25 13 12 27 27 C 1.38853 * 119.88532 * 359.97438 * 7 6 5 28 28 Cl 1.73599 * 120.04224 * 180.02562 * 27 7 6 29 29 C 1.38221 * 119.91936 * 359.71097 * 27 7 6 30 30 H 0.96697 * 114.00527 * 300.00583 * 1 2 3 31 31 H 1.09000 * 109.46638 * 119.99419 * 2 1 3 32 32 H 1.48506 * 109.99834 * 178.67912 * 3 2 1 33 33 H 1.48502 * 110.00011 * 299.99177 * 3 2 1 34 34 H 1.07999 * 119.96012 * 0.02562 * 5 4 2 35 35 H 1.07997 * 120.01866 * 180.02562 * 6 5 4 36 36 H 1.08995 * 109.47486 * 299.99493 * 9 8 7 37 37 H 1.08994 * 109.47492 * 60.00495 * 9 8 7 38 38 H 1.09000 * 109.47323 * 300.00019 * 10 9 8 39 39 H 1.09004 * 109.47090 * 59.99914 * 10 9 8 40 40 H 1.07991 * 126.58550 * 359.97438 * 12 11 10 41 41 H 0.96999 * 119.99949 * 0.02562 * 16 14 13 42 42 H 1.08999 * 113.61354 * 254.52730 * 19 17 16 43 43 H 1.08999 * 113.61279 * 25.43323 * 19 17 16 44 44 H 1.08996 * 109.47482 * 282.54170 * 22 20 19 45 45 H 1.09002 * 109.47218 * 42.54102 * 22 20 19 46 46 H 1.09004 * 113.61276 * 334.56170 * 24 17 16 47 47 H 1.08998 * 113.61893 * 105.38785 * 24 17 16 48 48 H 1.07996 * 119.97928 * 180.28938 * 29 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7105 -1.2303 5 6 1.5968 -2.0340 -1.4477 6 6 2.0556 -2.6881 -2.5753 7 6 2.8531 -2.0162 -3.4892 8 8 3.3059 -2.6577 -4.5988 9 6 2.9220 -4.0247 -4.7597 10 6 3.5223 -4.5738 -6.0555 11 7 3.1292 -5.9754 -6.2203 12 6 2.5068 -6.5154 -7.2874 13 6 2.3359 -7.8431 -7.0157 14 6 1.6964 -8.8302 -7.9062 15 8 1.2660 -8.4830 -8.9891 16 7 1.5893 -10.1169 -7.5194 17 6 0.9548 -11.0972 -8.4040 18 1 0.2662 -10.6418 -9.1157 19 6 1.9474 -12.0802 -9.0469 20 6 0.8943 -13.1757 -8.8102 21 1 0.1899 -13.2894 -9.6342 22 6 1.4868 -14.5081 -8.3470 23 9 0.4776 -15.2968 -7.7845 24 6 0.3616 -12.3052 -7.6599 25 7 2.8488 -8.0982 -5.7999 26 7 3.3325 -7.0142 -5.3008 27 6 3.1882 -0.6868 -3.2691 28 17 4.1857 0.1586 -4.4110 29 6 2.7212 -0.0354 -2.1430 30 1 -0.3934 0.4417 0.7649 31 1 1.7923 -0.5138 0.8901 32 1 3.5346 1.7703 0.0322 33 1 1.5616 2.4678 -1.2086 34 1 0.9754 -2.5571 -0.7360 35 1 1.7933 -3.7220 -2.7444 36 1 3.2887 -4.6071 -3.9146 37 1 1.8352 -4.0940 -4.8045 38 1 3.1560 -3.9915 -6.9010 39 1 4.6092 -4.5045 -6.0104 40 1 2.2018 -5.9977 -8.1847 41 1 1.9323 -10.3938 -6.6554 42 1 2.1396 -11.8798 -10.1009 43 1 2.8604 -12.2198 -8.4681 44 1 1.9218 -15.0285 -9.2002 45 1 2.2604 -14.3223 -7.6019 46 1 0.8412 -12.5064 -6.7019 47 1 -0.7261 -12.2858 -7.5929 48 1 2.9774 0.9999 -1.9732 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_7143556.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:48:54 Heat of formation + Delta-G solvation = -2.462685 kcal Electronic energy + Delta-G solvation = -34314.986016 eV Core-core repulsion = 29122.719442 eV Total energy + Delta-G solvation = -5192.266573 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 411.119 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -48.49940 -43.42525 -41.64282 -41.01804 -39.54877 -39.23166 -37.82612 -37.22135 -36.30715 -34.65975 -32.66887 -32.32551 -32.03793 -30.85046 -29.40848 -26.84691 -26.82082 -25.93113 -25.35407 -24.12779 -23.13107 -22.95734 -22.42944 -21.51495 -20.86743 -19.93866 -19.00452 -18.56001 -17.98943 -17.73738 -17.64004 -17.45084 -17.11246 -17.03671 -17.00814 -16.72050 -16.34030 -16.03115 -15.89166 -15.78756 -15.69788 -15.51366 -15.19502 -15.07721 -14.78339 -14.69458 -14.28117 -14.04274 -13.95084 -13.62751 -13.57605 -13.40469 -13.27138 -13.08894 -12.70509 -12.67462 -12.63065 -12.48818 -12.41075 -12.17317 -12.10304 -11.90069 -11.85183 -11.63632 -11.60664 -11.41771 -11.13019 -10.51776 -10.47782 -10.16226 -10.06848 -9.41641 -5.08373 -0.12697 -0.09315 -0.06575 0.52819 0.56470 1.00536 1.16056 1.54164 1.78077 1.86727 2.03933 2.19490 2.25363 2.95319 3.03791 3.17235 3.18707 3.25626 3.31964 3.47760 3.49410 3.56578 3.61067 3.64323 3.68255 3.69209 3.75850 3.85624 3.91051 3.96901 4.04992 4.09641 4.14481 4.17820 4.19760 4.24605 4.46680 4.51678 4.56098 4.62298 4.65520 4.68127 4.75919 4.88375 4.88686 4.94096 5.05473 5.15664 5.16522 5.26948 5.46269 5.85030 6.35919 6.48999 6.76036 7.10607 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.066 4.066 3 Si 0.678 3.322 4 C -0.097 4.097 5 C -0.041 4.041 6 C -0.192 4.192 7 C 0.145 3.855 8 O -0.298 6.298 9 C 0.046 3.954 10 C 0.126 3.874 11 N -0.361 5.361 12 C 0.106 3.894 13 C -0.105 4.105 14 C 0.609 3.391 15 O -0.535 6.535 16 N -0.705 5.705 17 C 0.124 3.876 18 H 0.121 0.879 19 C -0.143 4.143 20 C -0.144 4.144 21 H 0.106 0.894 22 C 0.073 3.927 23 F -0.216 7.216 24 C -0.138 4.138 25 N -0.200 5.200 26 N -0.058 5.058 27 C -0.060 4.060 28 Cl -0.047 7.047 29 C -0.077 4.077 30 H 0.385 0.615 31 H 0.079 0.921 32 H -0.251 1.251 33 H -0.247 1.247 34 H 0.140 0.860 35 H 0.142 0.858 36 H 0.086 0.914 37 H 0.076 0.924 38 H 0.122 0.878 39 H 0.116 0.884 40 H 0.209 0.791 41 H 0.410 0.590 42 H 0.080 0.920 43 H 0.090 0.910 44 H 0.077 0.923 45 H 0.075 0.925 46 H 0.091 0.909 47 H 0.081 0.919 48 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.041 2.053 3.686 4.219 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.177 4.177 3 Si 0.579 3.421 4 C -0.098 4.098 5 C -0.060 4.060 6 C -0.211 4.211 7 C 0.099 3.901 8 O -0.210 6.210 9 C -0.030 4.030 10 C 0.004 3.996 11 N -0.147 5.147 12 C -0.051 4.051 13 C -0.243 4.243 14 C 0.393 3.607 15 O -0.410 6.410 16 N -0.355 5.355 17 C 0.019 3.981 18 H 0.139 0.861 19 C -0.182 4.182 20 C -0.164 4.164 21 H 0.124 0.876 22 C 0.018 3.982 23 F -0.197 7.197 24 C -0.176 4.176 25 N -0.074 5.074 26 N -0.038 5.038 27 C -0.087 4.087 28 Cl -0.018 7.018 29 C -0.095 4.095 30 H 0.233 0.767 31 H 0.097 0.903 32 H -0.176 1.176 33 H -0.172 1.172 34 H 0.158 0.842 35 H 0.160 0.840 36 H 0.104 0.896 37 H 0.094 0.906 38 H 0.140 0.860 39 H 0.134 0.866 40 H 0.226 0.774 41 H 0.246 0.754 42 H 0.099 0.901 43 H 0.109 0.891 44 H 0.095 0.905 45 H 0.093 0.907 46 H 0.109 0.891 47 H 0.100 0.900 48 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 1.072 2.399 3.041 4.019 hybrid contribution -0.127 -0.355 -0.667 0.766 sum 0.945 2.043 2.374 3.272 Atomic orbital electron populations 1.86477 1.17005 1.81851 1.49894 1.24562 0.85874 1.10315 0.96952 0.95227 0.81007 0.78117 0.87794 1.19209 0.99805 0.94572 0.96173 1.20925 0.95753 0.93278 0.96003 1.21308 1.02246 1.01364 0.96167 1.18506 0.94407 0.90322 0.86884 1.86012 1.70509 1.24746 1.39753 1.22925 1.00547 0.81180 0.98376 1.21673 1.03241 0.75014 0.99636 1.50241 1.40641 1.10110 1.13684 1.23472 0.93856 0.94203 0.93550 1.21438 1.12933 0.94207 0.95762 1.16752 0.77894 0.81483 0.84568 1.90841 1.48939 1.79572 1.21669 1.45760 1.60293 1.07658 1.21837 1.22578 0.95537 0.86750 0.93251 0.86121 1.23457 0.97685 0.94485 1.02532 1.22996 0.99801 0.93551 1.00020 0.87567 1.21943 0.88010 0.89695 0.98586 1.92783 1.63575 1.76161 1.87219 1.23369 1.02201 0.93977 0.98090 1.74643 1.06779 1.19055 1.06943 1.82058 1.20981 0.88555 1.12237 1.19964 1.02807 0.90849 0.95107 1.98394 1.67499 1.76744 1.59207 1.20646 0.97533 0.99301 0.92058 0.76728 0.90317 1.17596 1.17167 0.84217 0.84034 0.89589 0.90589 0.85971 0.86567 0.77402 0.75411 0.90124 0.89130 0.90495 0.90657 0.89070 0.89984 0.84681 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.51 12.74 -35.23 -0.45 0.06 16 2 C -0.07 0.07 2.81 36.00 0.10 0.17 16 3 Si 0.68 -1.10 29.78 -169.99 -5.06 -6.17 16 4 C -0.10 -0.12 5.42 -104.61 -0.57 -0.68 16 5 C -0.04 -0.02 9.60 -39.60 -0.38 -0.40 16 6 C -0.19 -0.02 9.04 -39.44 -0.36 -0.38 16 7 C 0.15 0.19 6.68 -39.20 -0.26 -0.07 16 8 O -0.30 -0.02 9.60 -19.51 -0.19 -0.20 16 9 C 0.05 -0.11 4.95 37.16 0.18 0.07 16 10 C 0.13 -0.46 6.91 -4.04 -0.03 -0.48 16 11 N -0.36 0.42 3.69 -61.06 -0.23 0.20 16 12 C 0.11 -0.11 11.27 -16.83 -0.19 -0.30 16 13 C -0.10 -0.13 6.99 -83.55 -0.58 -0.71 16 14 C 0.61 1.25 7.82 -12.47 -0.10 1.15 16 15 O -0.53 -2.49 16.46 5.28 0.09 -2.40 16 16 N -0.71 -0.02 5.35 -54.06 -0.29 -0.31 16 17 C 0.12 -0.09 4.24 -67.12 -0.28 -0.37 16 18 H 0.12 0.06 7.46 -51.93 -0.39 -0.33 16 19 C -0.14 0.26 7.44 -25.92 -0.19 0.06 16 20 C -0.14 0.27 4.11 -89.81 -0.37 -0.10 16 21 H 0.11 -0.20 8.14 -51.93 -0.42 -0.63 16 22 C 0.07 -0.10 7.33 37.16 0.27 0.17 16 23 F -0.22 -0.45 17.30 2.25 0.04 -0.41 16 24 C -0.14 0.22 7.34 -25.92 -0.19 0.03 16 25 N -0.20 -0.42 12.04 32.85 0.40 -0.02 16 26 N -0.06 -0.09 13.65 60.35 0.82 0.73 16 27 C -0.06 -0.14 6.33 -39.36 -0.25 -0.39 16 28 Cl -0.05 -0.12 28.51 -51.86 -1.48 -1.60 16 29 C -0.08 -0.16 8.45 -39.57 -0.33 -0.50 16 30 H 0.38 -2.25 8.74 45.56 0.40 -1.85 16 31 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 32 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 33 H -0.25 -0.41 7.11 56.52 0.40 0.00 16 34 H 0.14 -0.15 8.06 -52.49 -0.42 -0.57 16 35 H 0.14 -0.26 6.30 -52.49 -0.33 -0.59 16 36 H 0.09 -0.19 7.66 -51.93 -0.40 -0.58 16 37 H 0.08 -0.21 7.66 -51.93 -0.40 -0.61 16 38 H 0.12 -0.71 8.08 -51.93 -0.42 -1.13 16 39 H 0.12 -0.48 8.14 -51.93 -0.42 -0.91 16 40 H 0.21 -0.81 8.06 -52.49 -0.42 -1.24 16 41 H 0.41 -0.47 8.41 -40.82 -0.34 -0.81 16 42 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 43 H 0.09 -0.21 8.04 -51.93 -0.42 -0.62 16 44 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 45 H 0.08 -0.20 8.06 -51.93 -0.42 -0.62 16 46 H 0.09 -0.19 8.08 -51.93 -0.42 -0.61 16 47 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 48 H 0.14 0.24 4.87 -52.49 -0.26 -0.02 16 LS Contribution 428.22 15.07 6.45 6.45 Total: 0.00 -10.25 428.22 -9.38 -19.64 By element: Atomic # 1 Polarization: -7.28 SS G_CDS: -5.96 Total: -13.24 kcal Atomic # 6 Polarization: 0.80 SS G_CDS: -3.53 Total: -2.73 kcal Atomic # 7 Polarization: -0.11 SS G_CDS: 0.70 Total: 0.60 kcal Atomic # 8 Polarization: -1.99 SS G_CDS: -0.55 Total: -2.54 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: -5.06 Total: -6.17 kcal Atomic # 17 Polarization: -0.12 SS G_CDS: -1.48 Total: -1.60 kcal Total LS contribution 6.45 Total: 6.45 kcal Total: -10.25 -9.38 -19.64 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_7143556.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.173 kcal (2) G-P(sol) polarization free energy of solvation -10.254 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.919 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.381 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.636 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.463 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds