Wall clock time and date at job start Sun Mar 7 2021 05:58:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.34776 * 120.00072 * 2 1 4 4 O 1.21625 * 120.00007 * 186.44931 * 3 2 1 5 5 C 1.47262 * 119.99898 * 6.45444 * 3 2 1 6 6 C 1.36772 * 126.94437 * 8.22912 * 5 3 2 7 7 N 1.34655 * 108.39935 * 179.97438 * 6 5 3 8 8 C 1.46496 * 124.84949 * 179.97438 * 7 6 5 9 9 C 1.36447 * 110.29456 * 359.97438 * 7 6 5 10 10 C 1.50707 * 125.57039 * 179.97438 * 9 7 6 11 11 O 1.42904 * 109.46542 * 30.00396 * 10 9 7 12 12 Si 1.86293 * 109.46999 * 149.99782 * 10 9 7 13 13 C 1.34483 * 108.85995 * 359.71243 * 9 7 6 14 14 C 1.46502 * 119.99723 * 180.02562 * 2 1 3 15 15 H 1.09004 * 109.46800 * 179.97438 * 14 2 1 16 16 C 1.52999 * 109.47277 * 299.99104 * 14 2 1 17 17 C 1.53000 * 109.47363 * 180.02562 * 16 14 2 18 18 C 1.52992 * 109.47288 * 300.00557 * 17 16 14 19 19 H 1.09005 * 109.47528 * 299.99965 * 18 17 16 20 20 C 1.50697 * 109.47297 * 180.02562 * 18 17 16 21 21 C 1.38238 * 119.99577 * 299.72181 * 20 18 17 22 22 C 1.38240 * 119.99796 * 179.76602 * 21 20 18 23 23 C 1.38231 * 119.99856 * 0.48816 * 22 21 20 24 24 C 1.38241 * 120.00216 * 359.78977 * 23 22 21 25 25 C 1.38230 * 119.99585 * 359.95629 * 24 23 22 26 26 C 1.53003 * 109.47215 * 59.99778 * 18 17 16 27 27 C 1.52997 * 109.47161 * 299.99741 * 26 18 17 28 28 H 1.09008 * 109.46774 * 275.86578 * 1 2 3 29 29 H 1.08996 * 109.47100 * 35.86000 * 1 2 3 30 30 H 1.08997 * 109.47571 * 155.86825 * 1 2 3 31 31 H 1.07999 * 125.79555 * 0.02562 * 6 5 3 32 32 H 1.08998 * 109.47002 * 90.02967 * 8 7 6 33 33 H 1.09004 * 109.46982 * 210.02534 * 8 7 6 34 34 H 1.09000 * 109.47398 * 330.02257 * 8 7 6 35 35 H 1.08999 * 109.47217 * 270.00246 * 10 9 7 36 36 H 0.96706 * 113.99749 * 180.02562 * 11 10 9 37 37 H 1.48497 * 110.00467 * 300.00424 * 12 10 9 38 38 H 1.48503 * 110.00068 * 61.32525 * 12 10 9 39 39 H 1.08003 * 126.83352 * 180.27108 * 13 9 7 40 40 H 1.09005 * 109.46520 * 60.00202 * 16 14 2 41 41 H 1.08998 * 109.47178 * 300.01043 * 16 14 2 42 42 H 1.09005 * 109.46426 * 60.00580 * 17 16 14 43 43 H 1.09001 * 109.46913 * 180.02562 * 17 16 14 44 44 H 1.07994 * 120.00213 * 0.02562 * 21 20 18 45 45 H 1.07995 * 119.99762 * 180.25877 * 22 21 20 46 46 H 1.07999 * 120.00114 * 179.76890 * 23 22 21 47 47 H 1.08000 * 120.00289 * 179.97438 * 24 23 22 48 48 H 1.08008 * 119.99773 * 179.97438 * 25 24 23 49 49 H 1.08994 * 109.47352 * 60.00040 * 26 18 17 50 50 H 1.09003 * 109.47221 * 180.02562 * 26 18 17 51 51 H 1.08999 * 109.47297 * 179.97438 * 27 26 18 52 52 H 1.08995 * 109.47612 * 299.99988 * 27 26 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3494 1.1705 -0.1183 5 6 1.4096 2.4385 0.1434 6 6 0.0837 2.5967 0.4397 7 7 -0.1884 3.9148 0.4798 8 6 -1.5051 4.4894 0.7668 9 6 0.9374 4.6388 0.2149 10 6 1.0224 6.1429 0.1711 11 8 0.0604 6.7005 1.0688 12 14 2.7315 6.6832 0.6785 13 6 1.9600 3.7911 0.0050 14 6 2.1974 -1.2688 -0.0006 15 1 3.2691 -1.0696 -0.0009 16 6 1.8280 -2.0715 1.2484 17 6 2.5934 -3.3963 1.2482 18 6 2.2243 -4.1984 -0.0013 19 1 1.1527 -4.3979 -0.0016 20 6 2.9777 -5.5035 -0.0012 21 6 4.3601 -5.5035 -0.0065 22 6 5.0513 -6.7006 -0.0015 23 6 4.3601 -7.8977 -0.0015 24 6 2.9777 -7.8978 -0.0021 25 6 2.2866 -6.7006 -0.0018 26 6 2.5939 -3.3956 -1.2503 27 6 1.8284 -2.0709 -1.2501 28 1 -0.3633 0.1050 1.0224 29 1 -0.3633 0.8328 -0.6020 30 1 -0.3634 -0.9378 -0.4201 31 1 -0.6243 1.7998 0.6129 32 1 -1.6060 4.6484 1.8403 33 1 -1.6068 5.4422 0.2472 34 1 -2.2822 3.8051 0.4262 35 1 0.8176 6.4890 -0.8419 36 1 0.0584 7.6673 1.0922 37 1 3.0230 6.2174 2.0581 38 1 3.7385 6.1359 -0.2658 39 1 2.9824 4.0538 -0.2233 40 1 0.7563 -2.2707 1.2484 41 1 2.0913 -1.5003 2.1386 42 1 3.6650 -3.1967 1.2484 43 1 2.3298 -3.9684 2.1378 44 1 4.9001 -4.5682 -0.0102 45 1 6.1312 -6.7006 -0.0014 46 1 4.9001 -8.8331 -0.0014 47 1 2.4377 -8.8331 -0.0026 48 1 1.2065 -6.7006 -0.0026 49 1 3.6654 -3.1960 -1.2501 50 1 2.3305 -3.9668 -2.1405 51 1 2.0920 -1.4988 -2.1396 52 1 0.7568 -2.2704 -1.2504 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15753748_13287730.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:58:27 Heat of formation + Delta-G solvation = 20.176580 kcal Electronic energy + Delta-G solvation = -31509.666163 eV Core-core repulsion = 27441.631465 eV Total energy + Delta-G solvation = -4068.034698 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.193 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -42.52744 -41.13665 -40.17661 -38.52389 -37.79116 -36.17821 -33.86170 -33.06967 -31.78927 -31.75219 -31.45423 -29.35533 -28.17678 -27.43027 -26.18795 -24.50936 -23.67375 -23.58392 -22.88460 -21.55623 -20.70309 -20.31115 -20.18113 -18.44943 -17.94488 -17.80661 -17.34389 -16.98899 -16.73912 -16.20463 -16.11168 -15.94559 -15.54861 -15.38644 -15.19243 -15.05365 -14.80834 -14.64087 -14.38183 -14.14789 -14.11213 -13.95687 -13.83602 -13.60359 -13.56627 -13.36924 -13.27427 -13.20222 -13.00640 -12.75383 -12.65350 -12.48912 -12.24273 -12.12404 -11.88821 -11.77333 -11.55903 -11.33576 -11.14761 -10.71997 -10.60843 -9.75654 -9.65646 -9.52350 -9.45001 -9.16662 -5.01021 0.51171 0.56357 0.80155 1.03512 1.45179 1.71052 1.88480 2.09973 2.13821 2.66523 2.93302 3.07836 3.58218 3.62595 3.67363 3.75995 3.81364 3.84993 3.91852 4.04015 4.12208 4.15963 4.21558 4.24644 4.26742 4.28660 4.33722 4.34269 4.35829 4.44339 4.45802 4.49339 4.55819 4.56967 4.60198 4.67159 4.69902 4.76332 4.86098 4.89383 4.96768 5.08011 5.09682 5.13979 5.15097 5.21413 5.24528 5.37140 5.41544 5.60461 5.64610 5.69885 5.77094 5.79693 6.01409 6.16708 6.17380 6.40845 6.53752 7.45831 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.612 5.612 3 C 0.592 3.408 4 O -0.543 6.543 5 C -0.225 4.225 6 C 0.035 3.965 7 N -0.423 5.423 8 C 0.076 3.924 9 C 0.027 3.973 10 C -0.046 4.046 11 O -0.552 6.552 12 Si 0.706 3.294 13 C -0.146 4.146 14 C 0.141 3.859 15 H 0.102 0.898 16 C -0.126 4.126 17 C -0.107 4.107 18 C -0.048 4.048 19 H 0.079 0.921 20 C -0.077 4.077 21 C -0.115 4.115 22 C -0.118 4.118 23 C -0.125 4.125 24 C -0.119 4.119 25 C -0.118 4.118 26 C -0.107 4.107 27 C -0.126 4.126 28 H 0.058 0.942 29 H 0.080 0.920 30 H 0.077 0.923 31 H 0.189 0.811 32 H 0.078 0.922 33 H 0.096 0.904 34 H 0.079 0.921 35 H 0.079 0.921 36 H 0.387 0.613 37 H -0.252 1.252 38 H -0.252 1.252 39 H 0.149 0.851 40 H 0.066 0.934 41 H 0.067 0.933 42 H 0.068 0.932 43 H 0.068 0.932 44 H 0.121 0.879 45 H 0.121 0.879 46 H 0.120 0.880 47 H 0.121 0.879 48 H 0.120 0.880 49 H 0.068 0.932 50 H 0.069 0.931 51 H 0.069 0.931 52 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.488 3.230 -0.232 7.251 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.344 5.344 3 C 0.383 3.617 4 O -0.421 6.421 5 C -0.235 4.235 6 C -0.101 4.101 7 N -0.097 5.097 8 C -0.065 4.065 9 C -0.082 4.082 10 C -0.156 4.156 11 O -0.359 6.359 12 Si 0.605 3.395 13 C -0.170 4.170 14 C 0.039 3.961 15 H 0.120 0.880 16 C -0.164 4.164 17 C -0.145 4.145 18 C -0.066 4.066 19 H 0.097 0.903 20 C -0.077 4.077 21 C -0.133 4.133 22 C -0.136 4.136 23 C -0.143 4.143 24 C -0.137 4.137 25 C -0.136 4.136 26 C -0.145 4.145 27 C -0.165 4.165 28 H 0.077 0.923 29 H 0.098 0.902 30 H 0.096 0.904 31 H 0.206 0.794 32 H 0.096 0.904 33 H 0.114 0.886 34 H 0.097 0.903 35 H 0.097 0.903 36 H 0.236 0.764 37 H -0.177 1.177 38 H -0.177 1.177 39 H 0.166 0.834 40 H 0.085 0.915 41 H 0.086 0.914 42 H 0.087 0.913 43 H 0.087 0.913 44 H 0.139 0.861 45 H 0.139 0.861 46 H 0.138 0.862 47 H 0.139 0.861 48 H 0.138 0.862 49 H 0.087 0.913 50 H 0.087 0.913 51 H 0.087 0.913 52 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -5.507 2.536 0.135 6.064 hybrid contribution -0.575 -0.613 -0.178 0.859 sum -6.082 1.923 -0.043 6.379 Atomic orbital electron populations 1.22255 0.80480 1.03728 1.01436 1.47665 1.06540 1.05628 1.74585 1.17413 0.86458 0.82412 0.75417 1.90765 1.13966 1.87017 1.50318 1.20220 0.93396 0.93025 1.16848 1.23000 0.97212 0.85721 1.04153 1.43593 1.09096 1.05313 1.51719 1.22165 0.80687 1.00440 1.03257 1.19801 0.86713 0.91780 1.09937 1.24388 1.05585 0.89186 0.96419 1.86421 1.59040 1.26089 1.64372 0.95727 0.73268 0.89453 0.81015 1.21584 0.97905 0.90334 1.07223 1.21125 0.98386 0.82010 0.94626 0.87956 1.21889 1.00732 0.95989 0.97821 1.21561 1.00741 0.94825 0.97405 1.20214 0.99402 0.91574 0.95440 0.90309 1.19847 0.93805 0.94551 0.99450 1.21034 0.93770 0.98155 1.00304 1.21187 1.00009 0.92557 0.99856 1.21184 0.94481 0.98165 1.00477 1.21169 0.94482 0.98033 1.00001 1.21076 0.99742 0.92018 1.00769 1.21562 1.00766 0.94820 0.97383 1.21890 1.00660 0.96020 0.97910 0.92342 0.90211 0.90449 0.79403 0.90372 0.88578 0.90263 0.90347 0.76415 1.17674 1.17680 0.83395 0.91533 0.91392 0.91342 0.91279 0.86089 0.86075 0.86156 0.86104 0.86208 0.91320 0.91277 0.91267 0.91523 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.11 7.69 59.85 0.46 0.35 16 2 N -0.61 -1.24 2.76 -175.26 -0.48 -1.73 16 3 C 0.59 3.35 7.65 -12.59 -0.10 3.25 16 4 O -0.54 -5.18 16.33 5.26 0.09 -5.09 16 5 C -0.22 -1.01 6.09 -103.35 -0.63 -1.64 16 6 C 0.03 0.05 9.25 -16.84 -0.16 -0.11 16 7 N -0.42 -0.61 3.09 -119.90 -0.37 -0.98 16 8 C 0.08 -0.13 9.81 59.84 0.59 0.45 16 9 C 0.03 0.08 6.18 -81.86 -0.51 -0.43 16 10 C -0.05 0.02 2.86 36.01 0.10 0.12 16 11 O -0.55 0.98 10.29 -35.23 -0.36 0.62 16 12 Si 0.71 -0.37 31.22 -169.99 -5.31 -5.68 16 13 C -0.15 -0.73 9.50 -37.50 -0.36 -1.09 16 14 C 0.14 0.21 2.51 -67.93 -0.17 0.04 16 15 H 0.10 0.42 6.92 -51.93 -0.36 0.06 16 16 C -0.13 -0.01 5.20 -26.73 -0.14 -0.15 16 17 C -0.11 0.00 5.02 -26.74 -0.13 -0.13 16 18 C -0.05 0.01 2.36 -91.78 -0.22 -0.21 16 19 H 0.08 -0.06 7.88 -51.93 -0.41 -0.47 16 20 C -0.08 -0.09 4.78 -104.63 -0.50 -0.59 16 21 C -0.11 -0.17 8.71 -39.58 -0.34 -0.52 16 22 C -0.12 -0.18 10.05 -39.58 -0.40 -0.57 16 23 C -0.13 -0.17 10.05 -39.58 -0.40 -0.57 16 24 C -0.12 -0.15 10.05 -39.58 -0.40 -0.54 16 25 C -0.12 -0.14 9.67 -39.59 -0.38 -0.52 16 26 C -0.11 0.00 5.01 -26.73 -0.13 -0.13 16 27 C -0.13 -0.02 5.19 -26.73 -0.14 -0.16 16 28 H 0.06 -0.17 7.29 -51.92 -0.38 -0.55 16 29 H 0.08 -0.17 5.48 -51.93 -0.28 -0.46 16 30 H 0.08 -0.23 6.44 -51.93 -0.33 -0.57 16 31 H 0.19 -0.41 4.47 -52.49 -0.23 -0.64 16 32 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 33 H 0.10 -0.19 6.73 -51.93 -0.35 -0.54 16 34 H 0.08 -0.31 8.13 -51.93 -0.42 -0.73 16 35 H 0.08 -0.17 7.96 -51.93 -0.41 -0.58 16 36 H 0.39 -2.56 8.74 45.56 0.40 -2.16 16 37 H -0.25 -0.92 7.11 56.52 0.40 -0.52 16 38 H -0.25 -0.62 6.89 56.52 0.39 -0.23 16 39 H 0.15 0.83 6.73 -52.48 -0.35 0.48 16 40 H 0.07 -0.07 7.67 -51.93 -0.40 -0.46 16 41 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 42 H 0.07 0.04 7.41 -51.93 -0.38 -0.34 16 43 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 44 H 0.12 0.07 7.11 -52.49 -0.37 -0.30 16 45 H 0.12 0.00 8.06 -52.49 -0.42 -0.42 16 46 H 0.12 -0.03 8.06 -52.49 -0.42 -0.45 16 47 H 0.12 -0.05 8.06 -52.49 -0.42 -0.47 16 48 H 0.12 -0.05 7.95 -52.48 -0.42 -0.46 16 49 H 0.07 0.05 7.38 -51.93 -0.38 -0.34 16 50 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 51 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 52 H 0.07 -0.07 6.67 -51.93 -0.35 -0.41 16 LS Contribution 401.15 15.07 6.05 6.05 Total: 0.00 -10.23 401.15 -12.38 -22.60 By element: Atomic # 1 Polarization: -4.61 SS G_CDS: -8.04 Total: -12.65 kcal Atomic # 6 Polarization: 0.81 SS G_CDS: -3.95 Total: -3.14 kcal Atomic # 7 Polarization: -1.85 SS G_CDS: -0.85 Total: -2.71 kcal Atomic # 8 Polarization: -4.20 SS G_CDS: -0.28 Total: -4.47 kcal Atomic # 14 Polarization: -0.37 SS G_CDS: -5.31 Total: -5.68 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -10.23 -12.38 -22.60 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15753748_13287730.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.777 kcal (2) G-P(sol) polarization free energy of solvation -10.225 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.552 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.376 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.601 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.177 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds