Wall clock time and date at job start Sun Mar 7 2021 05:59:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.37874 * 126.46034 * 2 1 4 4 C 1.46686 * 126.22898 * 359.97438 * 3 2 1 5 5 O 1.21692 * 119.99853 * 103.72964 * 4 3 2 6 6 N 1.34770 * 120.00053 * 283.72932 * 4 3 2 7 7 C 1.46502 * 119.99830 * 5.00840 * 6 4 3 8 8 C 1.46493 * 120.00276 * 185.00499 * 6 4 3 9 9 H 1.08998 * 109.47061 * 0.02562 * 8 6 4 10 10 C 1.52999 * 109.47128 * 119.99829 * 8 6 4 11 11 C 1.52998 * 109.47380 * 180.02562 * 10 8 6 12 12 C 1.52997 * 109.47278 * 300.00567 * 11 10 8 13 13 H 1.09007 * 109.47258 * 299.99735 * 12 11 10 14 14 C 1.50704 * 109.47316 * 179.97438 * 12 11 10 15 15 C 1.38237 * 119.99964 * 299.72208 * 14 12 11 16 16 C 1.38231 * 120.00044 * 179.80885 * 15 14 12 17 17 C 1.38237 * 120.00030 * 0.42052 * 16 15 14 18 18 C 1.38235 * 119.99745 * 359.81497 * 17 16 15 19 19 C 1.38232 * 120.00136 * 359.97438 * 18 17 16 20 20 C 1.52999 * 109.47378 * 59.99432 * 12 11 10 21 21 C 1.52997 * 109.47486 * 240.00369 * 8 6 4 22 22 N 1.37647 * 107.53867 * 180.02562 * 3 2 1 23 23 C 1.35534 * 108.64191 * 0.02562 * 22 3 2 24 24 C 1.50706 * 125.56465 * 179.97438 * 23 22 3 25 25 O 1.42899 * 109.47420 * 300.00751 * 24 23 22 26 26 Si 1.86300 * 109.47105 * 180.02562 * 24 23 22 27 27 C 1.35451 * 108.87435 * 359.72988 * 23 22 3 28 28 H 1.08998 * 109.47522 * 89.99385 * 1 2 3 29 29 H 1.09006 * 109.47249 * 329.99460 * 1 2 3 30 30 H 1.09004 * 109.47007 * 209.99397 * 1 2 3 31 31 H 1.08999 * 109.47553 * 94.48984 * 7 6 4 32 32 H 1.08999 * 109.47075 * 214.48958 * 7 6 4 33 33 H 1.09000 * 109.47270 * 334.48708 * 7 6 4 34 34 H 1.08998 * 109.47600 * 300.00315 * 10 8 6 35 35 H 1.09002 * 109.47162 * 60.00117 * 10 8 6 36 36 H 1.09003 * 109.47709 * 179.97438 * 11 10 8 37 37 H 1.08998 * 109.47017 * 60.00413 * 11 10 8 38 38 H 1.08004 * 119.99822 * 0.02562 * 15 14 12 39 39 H 1.07995 * 120.00059 * 180.21484 * 16 15 14 40 40 H 1.07999 * 119.99914 * 179.79098 * 17 16 15 41 41 H 1.08003 * 119.99585 * 179.97438 * 18 17 16 42 42 H 1.08004 * 119.99946 * 179.97438 * 19 18 17 43 43 H 1.09000 * 109.47396 * 179.97438 * 20 12 11 44 44 H 1.08998 * 109.46708 * 60.00281 * 20 12 11 45 45 H 1.09002 * 109.46574 * 299.99743 * 21 8 6 46 46 H 1.08991 * 109.47367 * 59.99599 * 21 8 6 47 47 H 0.96999 * 125.68100 * 180.02562 * 22 3 2 48 48 H 1.09006 * 109.46531 * 60.00580 * 24 23 22 49 49 H 0.96696 * 113.99621 * 299.99878 * 25 24 23 50 50 H 1.48504 * 109.99689 * 58.68584 * 26 24 23 51 51 H 1.48503 * 109.99604 * 180.02562 * 26 24 23 52 52 H 1.07998 * 126.07275 * 180.26052 * 27 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8898 2.5093 -0.0005 5 8 1.9472 3.1649 1.0231 6 7 1.4252 3.0699 -1.1346 7 6 1.2527 2.2528 -2.3383 8 6 1.0927 4.4963 -1.1638 9 1 1.2850 4.9343 -0.1844 10 6 1.9544 5.1995 -2.2144 11 6 1.6076 6.6893 -2.2445 12 6 0.1292 6.8618 -2.5988 13 1 -0.0631 6.4242 -3.5785 14 6 -0.2125 8.3293 -2.6278 15 6 -0.0549 9.0983 -1.4900 16 6 -0.3646 10.4452 -1.5177 17 6 -0.8403 11.0213 -2.6808 18 6 -1.0026 10.2512 -3.8172 19 6 -0.6887 8.9052 -3.7908 20 6 -0.7325 6.1586 -1.5482 21 6 -0.3856 4.6682 -1.5185 22 7 3.6284 0.6625 -0.0006 23 6 3.6217 -0.6928 -0.0015 24 6 4.8434 -1.5753 -0.0029 25 8 5.6233 -1.3073 -1.1699 26 14 4.3182 -3.3628 -0.0046 27 6 2.3379 -1.1247 0.0045 28 1 -0.3634 0.0001 -1.0276 29 1 -0.3634 0.8900 0.5139 30 1 -0.3633 -0.8901 0.5138 31 1 0.2239 1.8968 -2.3915 32 1 1.4754 2.8535 -3.2202 33 1 1.9306 1.4001 -2.2989 34 1 3.0076 5.0771 -1.9618 35 1 1.7626 4.7616 -3.1940 36 1 2.2218 7.1905 -2.9927 37 1 1.7998 7.1270 -1.2649 38 1 0.3137 8.6475 -0.5803 39 1 -0.2381 11.0467 -0.6297 40 1 -1.0855 12.0729 -2.7014 41 1 -1.3746 10.7012 -4.7258 42 1 -0.8159 8.3035 -4.6786 43 1 -1.7857 6.2819 -1.8004 44 1 -0.5402 6.5962 -0.5686 45 1 -0.5775 4.2303 -2.4981 46 1 -0.9995 4.1673 -0.7700 47 1 4.4190 1.2244 -0.0004 48 1 5.4393 -1.3722 0.8869 49 1 5.1552 -1.4667 -2.0009 50 1 3.4787 -3.6443 -1.1968 51 1 5.5140 -4.2434 -0.0054 52 1 2.0136 -2.1548 0.0093 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15753748_13940406.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:59:20 Heat of formation + Delta-G solvation = -5.892744 kcal Electronic energy + Delta-G solvation = -31746.739701 eV Core-core repulsion = 27677.574552 eV Total energy + Delta-G solvation = -4069.165149 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.193 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -42.61306 -41.21664 -40.27117 -38.68116 -37.87137 -36.27664 -33.73603 -33.03004 -31.88478 -31.79089 -31.56249 -29.45251 -28.28894 -27.92841 -26.68682 -24.36129 -23.78095 -23.53414 -22.48388 -21.56117 -21.37744 -20.43774 -19.95324 -19.03122 -18.09701 -17.88701 -17.70038 -16.72785 -16.47742 -16.37312 -16.21021 -15.95817 -15.47265 -15.30863 -15.18839 -15.01016 -14.79205 -14.59698 -14.35433 -14.20042 -14.16053 -14.03913 -13.88710 -13.82751 -13.60760 -13.56157 -13.34013 -13.32328 -13.06319 -12.92911 -12.68968 -12.32203 -12.22708 -12.20076 -11.87539 -11.86247 -11.63786 -11.43078 -11.26959 -11.08318 -10.81184 -9.81373 -9.79698 -9.72363 -9.56888 -9.08570 -4.96364 0.46892 0.52353 0.76235 1.06039 1.37308 1.59995 1.63746 1.87752 1.95021 2.49474 2.89019 3.23086 3.44167 3.56939 3.58433 3.66711 3.70678 3.89589 4.03094 4.10721 4.11068 4.16283 4.17769 4.22209 4.23722 4.27558 4.32802 4.38299 4.40864 4.42682 4.48960 4.57021 4.63451 4.65145 4.66962 4.68053 4.78706 4.81966 4.89254 4.97722 4.98813 5.05289 5.06277 5.10155 5.16668 5.17894 5.25417 5.27115 5.32581 5.45259 5.60377 5.66104 5.74508 5.76127 5.91584 6.12566 6.21468 6.25417 6.36478 7.03310 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C -0.110 4.110 3 C -0.031 4.031 4 C 0.591 3.409 5 O -0.526 6.526 6 N -0.599 5.599 7 C 0.075 3.925 8 C 0.139 3.861 9 H 0.103 0.897 10 C -0.127 4.127 11 C -0.107 4.107 12 C -0.048 4.048 13 H 0.079 0.921 14 C -0.077 4.077 15 C -0.115 4.115 16 C -0.118 4.118 17 C -0.125 4.125 18 C -0.119 4.119 19 C -0.118 4.118 20 C -0.108 4.108 21 C -0.125 4.125 22 N -0.512 5.512 23 C 0.010 3.990 24 C -0.059 4.059 25 O -0.535 6.535 26 Si 0.717 3.283 27 C -0.187 4.187 28 H 0.067 0.933 29 H 0.060 0.940 30 H 0.072 0.928 31 H 0.062 0.938 32 H 0.073 0.927 33 H 0.076 0.924 34 H 0.067 0.933 35 H 0.069 0.931 36 H 0.070 0.930 37 H 0.068 0.932 38 H 0.121 0.879 39 H 0.121 0.879 40 H 0.121 0.879 41 H 0.121 0.879 42 H 0.120 0.880 43 H 0.070 0.930 44 H 0.068 0.932 45 H 0.068 0.932 46 H 0.070 0.930 47 H 0.420 0.580 48 H 0.119 0.881 49 H 0.379 0.621 50 H -0.255 1.255 51 H -0.256 1.256 52 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.017 -1.628 -3.020 3.980 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.117 4.117 3 C -0.146 4.146 4 C 0.377 3.623 5 O -0.400 6.400 6 N -0.331 5.331 7 C -0.067 4.067 8 C 0.037 3.963 9 H 0.121 0.879 10 C -0.165 4.165 11 C -0.145 4.145 12 C -0.066 4.066 13 H 0.098 0.902 14 C -0.077 4.077 15 C -0.133 4.133 16 C -0.136 4.136 17 C -0.143 4.143 18 C -0.137 4.137 19 C -0.136 4.136 20 C -0.146 4.146 21 C -0.164 4.164 22 N -0.107 5.107 23 C -0.107 4.107 24 C -0.169 4.169 25 O -0.341 6.341 26 Si 0.616 3.384 27 C -0.212 4.212 28 H 0.086 0.914 29 H 0.079 0.921 30 H 0.091 0.909 31 H 0.080 0.920 32 H 0.091 0.909 33 H 0.095 0.905 34 H 0.085 0.915 35 H 0.087 0.913 36 H 0.088 0.912 37 H 0.087 0.913 38 H 0.139 0.861 39 H 0.139 0.861 40 H 0.139 0.861 41 H 0.139 0.861 42 H 0.138 0.862 43 H 0.089 0.911 44 H 0.087 0.913 45 H 0.087 0.913 46 H 0.088 0.912 47 H 0.258 0.742 48 H 0.136 0.864 49 H 0.226 0.774 50 H -0.179 1.179 51 H -0.181 1.181 52 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -1.373 -1.772 -2.454 3.324 hybrid contribution 0.556 0.917 -1.131 1.559 sum -0.817 -0.855 -3.585 3.776 Atomic orbital electron populations 1.20257 0.89403 1.02812 1.01987 1.19746 0.95447 0.90541 1.05998 1.19906 0.84479 0.93334 1.16882 1.17218 0.77403 0.84461 0.83202 1.90867 1.54623 1.62944 1.31612 1.47832 1.64550 1.09745 1.10989 1.21840 1.02352 0.95629 0.86924 1.21215 0.94560 0.79205 1.01360 0.87900 1.21889 0.99777 0.95600 0.99242 1.21556 0.95190 0.95208 1.02549 1.20214 0.95211 0.91148 1.00073 0.90236 1.19832 0.98892 0.95305 0.93690 1.21022 1.00317 0.93915 0.98021 1.21187 0.99070 0.95139 0.98209 1.21192 0.99812 1.00001 0.93251 1.21175 0.99910 0.94129 0.98440 1.21080 0.99710 0.95164 0.97615 1.21576 0.99793 0.93997 0.99201 1.21876 0.95178 0.96924 1.02401 1.41681 1.06732 1.06470 1.55788 1.20941 0.96765 0.83030 1.09944 1.24886 0.91798 1.09056 0.91127 1.86602 1.42079 1.89531 1.15885 0.94226 0.82162 0.72515 0.89498 1.20485 0.90744 0.98833 1.11129 0.91439 0.92104 0.90908 0.91976 0.90885 0.90550 0.91472 0.91280 0.91177 0.91316 0.86117 0.86066 0.86133 0.86081 0.86187 0.91132 0.91312 0.91332 0.91165 0.74224 0.86358 0.77351 1.17913 1.18087 0.83389 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.04 10.20 36.00 0.37 0.41 16 2 C -0.11 -0.11 5.84 -104.16 -0.61 -0.72 16 3 C -0.03 -0.06 5.05 -81.98 -0.41 -0.47 16 4 C 0.59 1.81 7.16 -12.85 -0.09 1.72 16 5 O -0.53 -3.62 16.45 5.20 0.09 -3.53 16 6 N -0.60 -0.17 2.76 -175.48 -0.48 -0.65 16 7 C 0.08 -0.15 9.32 59.85 0.56 0.41 16 8 C 0.14 -0.01 2.52 -67.94 -0.17 -0.18 16 9 H 0.10 0.22 6.91 -51.93 -0.36 -0.14 16 10 C -0.13 0.15 5.17 -26.73 -0.14 0.02 16 11 C -0.11 0.12 5.02 -26.73 -0.13 -0.02 16 12 C -0.05 0.05 2.36 -91.77 -0.22 -0.16 16 13 H 0.08 -0.12 7.88 -51.93 -0.41 -0.53 16 14 C -0.08 -0.03 4.78 -104.62 -0.50 -0.53 16 15 C -0.11 -0.08 8.71 -39.58 -0.34 -0.43 16 16 C -0.12 -0.10 10.05 -39.58 -0.40 -0.50 16 17 C -0.12 -0.11 10.05 -39.58 -0.40 -0.50 16 18 C -0.12 -0.09 10.05 -39.58 -0.40 -0.48 16 19 C -0.12 -0.07 9.67 -39.59 -0.38 -0.45 16 20 C -0.11 0.12 5.01 -26.71 -0.13 -0.02 16 21 C -0.13 0.14 5.21 -26.71 -0.14 0.01 16 22 N -0.51 -0.41 6.10 -5.69 -0.03 -0.44 16 23 C 0.01 0.00 6.47 -81.95 -0.53 -0.53 16 24 C -0.06 0.06 3.08 36.01 0.11 0.17 16 25 O -0.53 -0.06 12.88 -35.23 -0.45 -0.51 16 26 Si 0.72 -1.30 30.54 -169.99 -5.19 -6.49 16 27 C -0.19 -0.01 9.27 -39.98 -0.37 -0.38 16 28 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 29 H 0.06 0.04 7.96 -51.93 -0.41 -0.37 16 30 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 31 H 0.06 -0.17 8.14 -51.93 -0.42 -0.59 16 32 H 0.07 -0.23 6.44 -51.93 -0.33 -0.56 16 33 H 0.08 -0.12 6.49 -51.93 -0.34 -0.45 16 34 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 35 H 0.07 -0.14 6.69 -51.93 -0.35 -0.49 16 36 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 37 H 0.07 -0.04 7.40 -51.93 -0.38 -0.42 16 38 H 0.12 -0.03 7.10 -52.48 -0.37 -0.41 16 39 H 0.12 -0.07 8.06 -52.49 -0.42 -0.49 16 40 H 0.12 -0.08 8.06 -52.49 -0.42 -0.50 16 41 H 0.12 -0.11 8.06 -52.48 -0.42 -0.53 16 42 H 0.12 -0.11 7.95 -52.48 -0.42 -0.53 16 43 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 44 H 0.07 -0.03 7.37 -51.93 -0.38 -0.42 16 45 H 0.07 -0.13 7.67 -51.93 -0.40 -0.53 16 46 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 47 H 0.42 -0.07 8.96 -40.82 -0.37 -0.44 16 48 H 0.12 -0.17 7.96 -51.93 -0.41 -0.59 16 49 H 0.38 -1.00 8.70 45.56 0.40 -0.60 16 50 H -0.25 0.00 7.11 56.52 0.40 0.40 16 51 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 52 H 0.15 -0.27 6.17 -52.49 -0.32 -0.60 16 LS Contribution 410.77 15.07 6.19 6.19 Total: 0.00 -7.24 410.77 -12.51 -19.75 By element: Atomic # 1 Polarization: -3.35 SS G_CDS: -8.29 Total: -11.64 kcal Atomic # 6 Polarization: 1.66 SS G_CDS: -4.33 Total: -2.67 kcal Atomic # 7 Polarization: -0.58 SS G_CDS: -0.52 Total: -1.10 kcal Atomic # 8 Polarization: -3.68 SS G_CDS: -0.37 Total: -4.05 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: -5.19 Total: -6.49 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -7.24 -12.51 -19.75 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15753748_13940406.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.858 kcal (2) G-P(sol) polarization free energy of solvation -7.240 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.618 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.511 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.751 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.893 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds