Wall clock time and date at job start Sun Mar 7 2021 08:21:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.53004 * 109.47123 * 2 1 4 4 C 1.53004 * 109.47201 * 240.00206 * 2 1 3 5 5 O 1.45201 * 109.47345 * 120.00224 * 2 1 3 6 6 C 1.34630 * 117.00046 * 59.99605 * 5 2 1 7 7 O 1.21516 * 120.00250 * 0.02562 * 6 5 2 8 8 N 1.34784 * 120.00065 * 180.02562 * 6 5 2 9 9 C 1.46493 * 119.99864 * 179.72923 * 8 6 5 10 10 H 1.09000 * 112.85483 * 334.66378 * 9 8 6 11 11 C 1.53777 * 113.61833 * 105.86275 * 9 8 6 12 12 C 1.54054 * 86.98542 * 89.15903 * 11 9 8 13 13 F 1.39902 * 113.61169 * 270.88538 * 12 11 9 14 14 C 1.53005 * 113.69390 * 139.99503 * 12 11 9 15 15 N 1.46500 * 109.47236 * 87.46797 * 14 12 11 16 16 C 1.34771 * 119.99696 * 179.97438 * 15 14 12 17 17 O 1.21697 * 120.00389 * 359.97438 * 16 15 14 18 18 C 1.46683 * 119.99850 * 179.97438 * 16 15 14 19 19 C 1.37869 * 126.23391 * 179.71296 * 18 16 15 20 20 C 1.39832 * 107.08605 * 179.85208 * 19 18 16 21 21 C 1.50704 * 126.06533 * 180.16188 * 20 19 18 22 22 O 1.42899 * 109.47382 * 65.27762 * 21 20 19 23 23 Si 1.86303 * 109.46729 * 185.27885 * 21 20 19 24 24 C 1.35445 * 107.86281 * 0.41654 * 20 19 18 25 25 N 1.35532 * 108.87327 * 359.74295 * 24 20 19 26 26 C 1.53777 * 87.07820 * 25.43361 * 12 11 9 27 27 H 1.09000 * 109.46884 * 299.99544 * 1 2 3 28 28 H 1.08993 * 109.46822 * 59.99709 * 1 2 3 29 29 H 1.08997 * 109.46645 * 180.02562 * 1 2 3 30 30 H 1.08998 * 109.47093 * 179.97438 * 3 2 1 31 31 H 1.08994 * 109.46984 * 299.99875 * 3 2 1 32 32 H 1.08997 * 109.47133 * 59.99999 * 3 2 1 33 33 H 1.09006 * 109.46751 * 299.99920 * 4 2 1 34 34 H 1.08994 * 109.46964 * 59.99535 * 4 2 1 35 35 H 1.08998 * 109.47138 * 180.02562 * 4 2 1 36 36 H 0.97000 * 119.99339 * 0.02562 * 8 6 5 37 37 H 1.09001 * 113.61733 * 203.66099 * 11 9 8 38 38 H 1.09003 * 113.61313 * 334.56504 * 11 9 8 39 39 H 1.09001 * 109.46522 * 207.47043 * 14 12 11 40 40 H 1.09003 * 109.46710 * 327.46177 * 14 12 11 41 41 H 0.96998 * 119.99748 * 359.97438 * 15 14 12 42 42 H 1.08011 * 126.45735 * 0.02562 * 19 18 16 43 43 H 1.08998 * 109.47222 * 305.27601 * 21 20 19 44 44 H 0.96705 * 113.99919 * 59.99637 * 22 21 20 45 45 H 1.48497 * 109.99954 * 179.97438 * 23 21 20 46 46 H 1.48508 * 110.00098 * 301.31685 * 23 21 20 47 47 H 1.08004 * 125.56332 * 179.76158 * 24 20 19 48 48 H 0.97003 * 125.67727 * 179.97438 * 25 24 20 49 49 H 1.08998 * 113.61800 * 220.02412 * 26 12 11 50 50 H 1.08999 * 113.61311 * 89.11809 * 26 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2493 5 8 2.0141 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3383 7 8 0.9516 -2.5097 0.5036 8 7 2.0673 -2.6654 2.4172 9 6 1.6688 -4.0649 2.5864 10 1 0.7382 -4.3052 2.0722 11 6 2.8023 -5.0663 2.3084 12 6 3.1727 -4.9360 3.7981 13 9 4.0811 -3.9052 4.0616 14 6 3.5721 -6.2611 4.4505 15 7 5.0068 -6.4869 4.2587 16 6 5.5859 -7.5991 4.7528 17 8 4.9170 -8.4155 5.3587 18 6 7.0223 -7.8255 4.5603 19 6 7.7443 -8.9092 5.0132 20 6 9.0686 -8.7197 4.6060 21 6 10.2210 -9.6536 4.8724 22 8 10.0020 -10.8881 4.1868 23 14 11.8021 -8.8778 4.2649 24 6 9.1327 -7.5451 3.9346 25 7 7.8960 -6.9918 3.8999 26 6 1.7067 -4.5439 4.0472 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8899 29 1 -0.3632 -1.0277 0.0005 30 1 3.1300 1.4425 0.0005 31 1 1.6767 1.9563 -0.8899 32 1 1.6767 1.9563 0.8900 33 1 1.6767 -1.7489 -1.2493 34 1 1.6767 -0.2074 -2.1392 35 1 3.1300 -0.7216 -1.2490 36 1 2.6264 -2.2363 3.0836 37 1 2.4493 -6.0597 2.0316 38 1 3.5666 -4.6838 1.6320 39 1 3.3497 -6.2226 5.5169 40 1 3.0115 -7.0755 3.9916 41 1 5.5400 -5.8360 3.7761 42 1 7.3591 -9.7480 5.5742 43 1 10.2965 -9.8413 5.9434 44 1 9.9247 -10.7967 3.2272 45 1 12.9463 -9.7886 4.5223 46 1 11.7000 -8.5877 2.8120 47 1 10.0240 -7.1190 3.4979 48 1 7.6650 -6.1485 3.4798 49 1 1.5871 -3.7400 4.7735 50 1 1.0547 -5.3948 4.2449 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15774724_10543058.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:21:11 Heat of formation + Delta-G solvation = -122.712409 kcal Electronic energy + Delta-G solvation = -33686.682825 eV Core-core repulsion = 28824.886146 eV Total energy + Delta-G solvation = -4861.796679 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.178 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -48.96561 -42.48663 -41.91454 -40.44797 -39.81006 -37.90084 -37.80030 -36.06351 -35.29435 -33.93142 -32.61332 -31.02334 -29.11026 -28.39463 -28.32914 -27.12156 -26.45447 -24.92552 -23.75833 -22.92328 -21.37446 -21.21633 -20.91022 -20.60319 -20.06849 -19.36308 -17.87870 -17.68266 -17.41807 -17.29318 -17.12340 -17.04769 -16.59688 -16.45102 -16.22110 -15.97158 -15.80904 -15.55325 -15.39898 -15.38289 -14.87848 -14.70203 -14.53527 -14.46195 -14.35433 -13.86957 -13.82121 -13.67092 -13.46642 -13.37048 -13.18250 -13.13052 -12.94339 -12.89929 -12.81934 -12.47943 -12.45785 -12.34558 -11.85156 -11.76060 -11.43995 -11.43249 -11.31139 -11.17248 -10.48687 -10.42049 -10.29349 -9.98645 -9.32138 -4.83733 0.33062 1.06536 1.38904 1.53775 1.65921 1.67517 1.83741 2.07191 2.10322 2.22075 2.94692 3.01108 3.02980 3.16233 3.52726 3.55897 3.61165 3.71093 3.76755 3.77193 3.91537 3.97433 4.14442 4.29528 4.31510 4.36261 4.45991 4.54685 4.58919 4.59341 4.59625 4.73211 4.73949 4.75715 4.79003 4.82431 4.84370 4.85051 4.87616 4.88787 5.00665 5.09912 5.14429 5.24397 5.27267 5.37954 5.54971 5.56062 5.71287 6.24616 6.29158 6.45554 6.62646 6.96122 7.26174 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.648 3.352 7 O -0.590 6.590 8 N -0.686 5.686 9 C 0.130 3.870 10 H 0.110 0.890 11 C -0.160 4.160 12 C 0.085 3.915 13 F -0.191 7.191 14 C 0.112 3.888 15 N -0.716 5.716 16 C 0.591 3.409 17 O -0.571 6.571 18 C -0.071 4.071 19 C -0.101 4.101 20 C -0.223 4.223 21 C -0.060 4.060 22 O -0.557 6.557 23 Si 0.786 3.214 24 C 0.059 3.941 25 N -0.517 5.517 26 C -0.143 4.143 27 H 0.061 0.939 28 H 0.087 0.913 29 H 0.064 0.936 30 H 0.069 0.931 31 H 0.099 0.901 32 H 0.069 0.931 33 H 0.064 0.936 34 H 0.087 0.913 35 H 0.062 0.938 36 H 0.415 0.585 37 H 0.130 0.870 38 H 0.080 0.920 39 H 0.080 0.920 40 H 0.100 0.900 41 H 0.409 0.591 42 H 0.127 0.873 43 H 0.109 0.891 44 H 0.384 0.616 45 H -0.313 1.313 46 H -0.268 1.268 47 H 0.212 0.788 48 H 0.435 0.565 49 H 0.099 0.901 50 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.901 7.860 -1.997 8.329 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.284 6.284 6 C 0.401 3.599 7 O -0.480 6.480 8 N -0.346 5.346 9 C 0.025 3.975 10 H 0.128 0.872 11 C -0.199 4.199 12 C 0.066 3.934 13 F -0.172 7.172 14 C -0.011 4.011 15 N -0.368 5.368 16 C 0.380 3.620 17 O -0.450 6.450 18 C -0.184 4.184 19 C -0.128 4.128 20 C -0.230 4.230 21 C -0.168 4.168 22 O -0.365 6.365 23 Si 0.690 3.310 24 C -0.079 4.079 25 N -0.114 5.114 26 C -0.181 4.181 27 H 0.080 0.920 28 H 0.105 0.895 29 H 0.083 0.917 30 H 0.088 0.912 31 H 0.117 0.883 32 H 0.088 0.912 33 H 0.083 0.917 34 H 0.105 0.895 35 H 0.081 0.919 36 H 0.252 0.748 37 H 0.149 0.851 38 H 0.099 0.901 39 H 0.098 0.902 40 H 0.118 0.882 41 H 0.246 0.754 42 H 0.145 0.855 43 H 0.127 0.873 44 H 0.233 0.767 45 H -0.241 1.241 46 H -0.194 1.194 47 H 0.229 0.771 48 H 0.276 0.724 49 H 0.117 0.883 50 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 1.641 7.019 -2.025 7.487 hybrid contribution -0.249 -0.190 -0.720 0.786 sum 1.391 6.828 -2.746 7.490 Atomic orbital electron populations 1.22478 0.93966 1.03769 1.03542 1.22372 0.94511 0.92559 0.81453 1.21896 1.02467 0.90911 1.04262 1.22471 1.01625 1.02278 0.97301 1.86317 1.71490 1.23254 1.47370 1.18280 0.78484 0.80740 0.82370 1.90913 1.42095 1.70999 1.44015 1.44439 1.54899 1.11949 1.23282 1.21874 0.99184 0.78291 0.98125 0.87163 1.24270 0.99117 1.02250 0.94293 1.22273 0.89205 0.84293 0.97644 1.92846 1.68926 1.60419 1.94966 1.21915 0.81056 0.95902 1.02262 1.45574 1.10516 1.22738 1.57985 1.17181 0.85436 0.81242 0.78166 1.90860 1.64268 1.46417 1.43448 1.20121 0.90201 0.97098 1.11008 1.21244 0.93394 0.97255 1.00899 1.19878 0.95433 0.99086 1.08570 1.24739 1.04302 0.86344 1.01433 1.86572 1.94176 1.30966 1.24811 0.94250 0.71371 0.85260 0.80113 1.22380 0.89050 0.94595 1.01855 1.41884 1.07089 1.19829 1.42603 1.24011 0.93773 1.04397 0.95924 0.91961 0.89452 0.91659 0.91177 0.88278 0.91220 0.91682 0.89467 0.91941 0.74807 0.85146 0.90106 0.90177 0.88198 0.75437 0.85508 0.87293 0.76680 1.24150 1.19394 0.77112 0.72372 0.88275 0.83736 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.35 8.37 71.98 0.60 0.25 16 2 C 0.13 0.21 1.13 -10.79 -0.01 0.20 16 3 C -0.14 0.43 8.85 71.98 0.64 1.07 16 4 C -0.18 -0.31 8.37 71.98 0.60 0.29 16 5 O -0.37 -1.56 9.94 -55.39 -0.55 -2.12 16 6 C 0.65 3.15 8.06 129.79 1.05 4.20 16 7 O -0.59 -5.71 11.50 19.79 0.23 -5.48 16 8 N -0.69 0.87 5.18 -567.60 -2.94 -2.07 16 9 C 0.13 -0.61 4.29 45.52 0.20 -0.42 16 10 H 0.11 -0.27 7.50 -2.39 -0.02 -0.28 16 11 C -0.16 1.12 7.35 31.21 0.23 1.35 16 12 C 0.08 -0.62 1.74 -10.17 -0.02 -0.64 16 13 F -0.19 0.85 15.53 44.97 0.70 1.55 16 14 C 0.11 -0.52 5.43 86.38 0.47 -0.05 16 15 N -0.72 2.09 5.45 -467.07 -2.54 -0.46 16 16 C 0.59 2.80 7.79 86.45 0.67 3.48 16 17 O -0.57 -7.78 16.88 -4.34 -0.07 -7.85 16 18 C -0.07 -0.17 7.06 40.35 0.28 0.12 16 19 C -0.10 -0.58 10.59 22.57 0.24 -0.34 16 20 C -0.22 -0.05 5.43 -20.12 -0.11 -0.16 16 21 C -0.06 -0.02 3.02 71.24 0.22 0.20 16 22 O -0.56 -2.69 12.88 -148.98 -1.92 -4.61 16 23 Si 0.79 -3.36 30.60 68.60 2.10 -1.26 16 24 C 0.06 -0.36 10.45 83.48 0.87 0.51 16 25 N -0.52 3.15 5.99 -183.63 -1.10 2.05 16 26 C -0.14 1.30 7.28 31.12 0.23 1.53 16 27 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 28 H 0.09 -0.12 8.14 -2.39 -0.02 -0.14 16 29 H 0.06 0.45 5.88 -2.39 -0.01 0.44 16 30 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 31 H 0.10 -0.63 8.14 -2.39 -0.02 -0.65 16 32 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 33 H 0.06 0.44 5.88 -2.38 -0.01 0.43 16 34 H 0.09 -0.13 8.14 -2.39 -0.02 -0.15 16 35 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 36 H 0.41 -1.48 7.93 -92.71 -0.73 -2.21 16 37 H 0.13 -1.25 7.91 -2.39 -0.02 -1.27 16 38 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 39 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 40 H 0.10 -0.53 7.85 -2.39 -0.02 -0.55 16 41 H 0.41 -3.18 7.16 -92.71 -0.66 -3.85 16 42 H 0.13 1.22 8.06 -2.90 -0.02 1.20 16 43 H 0.11 0.08 7.96 -2.39 -0.02 0.06 16 44 H 0.38 -0.60 8.70 -74.05 -0.64 -1.25 16 45 H -0.31 -1.58 7.11 99.48 0.71 -0.88 16 46 H -0.27 0.77 7.11 99.48 0.71 1.48 16 47 H 0.21 -2.87 6.21 -2.91 -0.02 -2.89 16 48 H 0.44 -5.67 8.19 -92.71 -0.76 -6.43 16 49 H 0.10 -0.90 8.14 -2.39 -0.02 -0.92 16 50 H 0.14 -1.87 8.10 -2.39 -0.02 -1.89 16 Total: 0.00 -27.73 412.10 -1.69 -29.42 By element: Atomic # 1 Polarization: -19.03 SS G_CDS: -1.75 Total: -20.77 kcal Atomic # 6 Polarization: 5.43 SS G_CDS: 6.15 Total: 11.58 kcal Atomic # 7 Polarization: 6.11 SS G_CDS: -6.58 Total: -0.47 kcal Atomic # 8 Polarization: -17.74 SS G_CDS: -2.31 Total: -20.05 kcal Atomic # 9 Polarization: 0.85 SS G_CDS: 0.70 Total: 1.55 kcal Atomic # 14 Polarization: -3.36 SS G_CDS: 2.10 Total: -1.26 kcal Total: -27.73 -1.69 -29.42 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15774724_10543058.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.290 kcal (2) G-P(sol) polarization free energy of solvation -27.731 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.021 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.691 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.423 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.712 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds