Wall clock time and date at job start Sun Mar 7 2021 08:21:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.35524 * 125.68065 * 2 1 4 4 C 1.35452 * 108.87722 * 180.02562 * 3 2 1 5 5 C 1.50697 * 126.07169 * 180.02562 * 4 3 2 6 6 O 1.42900 * 109.47069 * 299.97345 * 5 4 3 7 7 Si 1.86300 * 109.47326 * 179.97438 * 5 4 3 8 8 C 1.39836 * 107.85946 * 0.02562 * 4 3 2 9 9 C 1.37656 * 125.67457 * 180.02562 * 2 1 3 10 10 C 1.46672 * 126.23627 * 0.25467 * 9 2 1 11 11 O 1.21698 * 120.00031 * 353.98273 * 10 9 2 12 12 N 1.34774 * 120.00060 * 173.97756 * 10 9 2 13 13 C 1.46504 * 120.00265 * 185.12401 * 12 10 9 14 14 C 1.52999 * 109.47524 * 179.97438 * 13 12 10 15 15 F 1.39904 * 112.84827 * 50.33009 * 14 13 12 16 16 C 1.53778 * 113.61643 * 181.52907 * 14 13 12 17 17 C 1.53777 * 87.07908 * 139.97994 * 16 14 13 18 18 H 1.09003 * 113.61544 * 220.01520 * 17 16 14 19 19 N 1.46500 * 113.61418 * 89.20277 * 17 16 14 20 20 C 1.34783 * 119.99820 * 154.99568 * 19 17 16 21 21 O 1.21502 * 120.00078 * 0.02562 * 20 19 17 22 22 O 1.34641 * 119.99388 * 179.97438 * 20 19 17 23 23 C 1.45203 * 116.99481 * 180.02562 * 22 20 19 24 24 C 1.53001 * 109.46913 * 60.00393 * 23 22 20 25 25 C 1.52996 * 109.46951 * 179.97438 * 23 22 20 26 26 C 1.52996 * 109.47240 * 300.00235 * 23 22 20 27 27 C 1.53780 * 113.61048 * 279.13821 * 14 13 12 28 28 H 1.09007 * 109.47039 * 273.92457 * 1 2 3 29 29 H 1.08991 * 109.47606 * 33.92598 * 1 2 3 30 30 H 1.09002 * 109.47310 * 153.93163 * 1 2 3 31 31 H 1.08006 * 125.56040 * 0.02562 * 3 2 1 32 32 H 1.09003 * 109.47460 * 59.97128 * 5 4 3 33 33 H 0.96698 * 114.00052 * 300.00300 * 6 5 4 34 34 H 1.48498 * 110.00099 * 179.97438 * 7 5 4 35 35 H 1.48504 * 109.99911 * 301.31564 * 7 5 4 36 36 H 1.08010 * 126.45252 * 180.02562 * 8 4 3 37 37 H 0.97003 * 119.99782 * 5.12097 * 12 10 9 38 38 H 1.08998 * 109.46779 * 300.00190 * 13 12 10 39 39 H 1.08999 * 109.47001 * 59.99410 * 13 12 10 40 40 H 1.08994 * 113.61197 * 254.52945 * 16 14 13 41 41 H 1.09001 * 113.61086 * 25.34613 * 16 14 13 42 42 H 0.97000 * 119.99719 * 334.99792 * 19 17 16 43 43 H 1.08993 * 109.47356 * 60.00102 * 24 23 22 44 44 H 1.09004 * 109.46613 * 179.97438 * 24 23 22 45 45 H 1.08998 * 109.47019 * 299.99273 * 24 23 22 46 46 H 1.09002 * 109.46967 * 60.00127 * 25 23 22 47 47 H 1.09004 * 109.47305 * 179.97438 * 25 23 22 48 48 H 1.08996 * 109.47761 * 300.00491 * 25 23 22 49 49 H 1.09005 * 109.47244 * 60.00001 * 26 23 22 50 50 H 1.08996 * 109.47130 * 180.02562 * 26 23 22 51 51 H 1.09002 * 109.47021 * 300.00082 * 26 23 22 52 52 H 1.09001 * 113.61980 * 334.56323 * 27 14 13 53 53 H 1.09006 * 113.61454 * 105.47078 * 27 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1008 0.0000 4 6 3.5521 0.7093 -0.0006 5 6 4.7537 1.6188 -0.0002 6 8 4.7269 2.4438 -1.1667 7 14 6.3089 0.5932 -0.0005 8 6 3.5779 -0.6889 -0.0015 9 6 2.2677 -1.1182 -0.0005 10 6 1.8123 -2.5125 -0.0064 11 8 0.6267 -2.7658 0.0991 12 7 2.7069 -3.5131 -0.1287 13 6 2.2449 -4.8983 -0.2475 14 6 3.4523 -5.8296 -0.3731 15 9 4.4156 -5.6067 0.6167 16 6 3.0732 -7.3104 -0.5413 17 6 4.2188 -7.4063 -1.5626 18 1 3.9775 -8.0158 -2.4335 19 7 5.5102 -7.7544 -0.9649 20 6 6.4580 -8.3556 -1.7112 21 8 6.2416 -8.6084 -2.8797 22 8 7.6451 -8.6750 -1.1619 23 6 8.6185 -9.3200 -2.0250 24 6 8.9448 -8.3995 -3.2027 25 6 9.8952 -9.6036 -1.2310 26 6 8.0413 -10.6358 -2.5507 27 6 4.0340 -5.8957 -1.7951 28 1 -0.3633 0.0703 1.0253 29 1 -0.3634 0.8526 -0.5735 30 1 -0.3634 -0.9231 -0.4516 31 1 1.9081 2.1235 0.0004 32 1 4.7332 2.2476 0.8899 33 1 4.7429 1.9501 -1.9981 34 1 7.5011 1.4785 -0.0008 35 1 6.3336 -0.2923 1.1914 36 1 4.4583 -1.3145 -0.0018 37 1 3.6567 -3.3161 -0.1380 38 1 1.6692 -5.1665 0.6383 39 1 1.6167 -4.9970 -1.1327 40 1 3.2367 -7.9076 0.3557 41 1 2.0851 -7.4614 -0.9761 42 1 5.6831 -7.5523 -0.0321 43 1 9.3561 -7.4622 -2.8282 44 1 9.6759 -8.8835 -3.8503 45 1 8.0355 -8.1971 -3.7685 46 1 9.6630 -10.2592 -0.3917 47 1 10.6258 -10.0882 -1.8788 48 1 10.3062 -8.6661 -0.8568 49 1 7.1318 -10.4333 -3.1165 50 1 8.7721 -11.1201 -3.1982 51 1 7.8087 -11.2915 -1.7117 52 1 3.3097 -5.6593 -2.5746 53 1 4.9722 -5.3525 -1.9087 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15774724_10803934.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:21:15 Heat of formation + Delta-G solvation = -115.546167 kcal Electronic energy + Delta-G solvation = -36337.344432 eV Core-core repulsion = 31320.320885 eV Total energy + Delta-G solvation = -5017.023546 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.194 amu Computer time = 1.66 seconds Orbital eigenvalues (eV) -48.88546 -42.55917 -41.87020 -40.39609 -39.73966 -37.87062 -37.66774 -36.03730 -35.26521 -34.11100 -33.70860 -31.19245 -28.90175 -28.35895 -28.32599 -28.29507 -27.04506 -25.71277 -24.80719 -23.53407 -22.82599 -21.19845 -21.17221 -20.89192 -20.43315 -19.39738 -19.08170 -17.66045 -17.44481 -17.29927 -17.24339 -17.08947 -17.03188 -16.77306 -16.37885 -16.22348 -15.89320 -15.61425 -15.53576 -15.45855 -15.35106 -15.22551 -14.89059 -14.53082 -14.51148 -14.38240 -14.05681 -13.75237 -13.69358 -13.65709 -13.34137 -13.16607 -13.15578 -13.13697 -13.05322 -12.90459 -12.86775 -12.77114 -12.43856 -12.30854 -12.19427 -11.99068 -11.65816 -11.39714 -11.34207 -11.12960 -11.11230 -10.37964 -10.31739 -10.23802 -9.74213 -9.25247 -4.93435 0.36997 1.11416 1.41360 1.51578 1.54835 1.70757 1.75135 2.03389 2.23615 2.25556 3.02414 3.06051 3.11825 3.23614 3.59491 3.61942 3.66288 3.69335 3.74414 3.80238 3.90901 3.94718 4.05462 4.19711 4.33106 4.33689 4.38760 4.39753 4.50582 4.60982 4.62129 4.63046 4.65140 4.66287 4.68033 4.72822 4.77235 4.80391 4.85187 4.87918 4.88864 4.91652 4.92894 5.10555 5.13787 5.23196 5.27899 5.30966 5.43121 5.59141 5.64557 5.89300 6.14453 6.33525 6.35466 6.88861 7.03102 7.30440 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.414 5.414 3 C 0.049 3.951 4 C -0.218 4.218 5 C -0.035 4.035 6 O -0.560 6.560 7 Si 0.775 3.225 8 C -0.128 4.128 9 C -0.073 4.073 10 C 0.590 3.410 11 O -0.579 6.579 12 N -0.708 5.708 13 C 0.117 3.883 14 C 0.081 3.919 15 F -0.194 7.194 16 C -0.143 4.143 17 C 0.129 3.871 18 H 0.112 0.888 19 N -0.687 5.687 20 C 0.648 3.352 21 O -0.588 6.588 22 O -0.371 6.371 23 C 0.127 3.873 24 C -0.180 4.180 25 C -0.139 4.139 26 C -0.180 4.180 27 C -0.159 4.159 28 H 0.079 0.921 29 H 0.107 0.893 30 H 0.090 0.910 31 H 0.188 0.812 32 H 0.102 0.898 33 H 0.394 0.606 34 H -0.304 1.304 35 H -0.286 1.286 36 H 0.166 0.834 37 H 0.414 0.586 38 H 0.076 0.924 39 H 0.105 0.895 40 H 0.095 0.905 41 H 0.146 0.854 42 H 0.414 0.586 43 H 0.062 0.938 44 H 0.086 0.914 45 H 0.066 0.934 46 H 0.068 0.932 47 H 0.099 0.901 48 H 0.069 0.931 49 H 0.066 0.934 50 H 0.087 0.913 51 H 0.060 0.940 52 H 0.134 0.866 53 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.316 -1.755 -1.936 2.632 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.086 5.086 3 C -0.088 4.088 4 C -0.224 4.224 5 C -0.146 4.146 6 O -0.367 6.367 7 Si 0.682 3.318 8 C -0.154 4.154 9 C -0.186 4.186 10 C 0.379 3.621 11 O -0.461 6.461 12 N -0.359 5.359 13 C -0.007 4.007 14 C 0.062 3.938 15 F -0.175 7.175 16 C -0.181 4.181 17 C 0.025 3.975 18 H 0.130 0.870 19 N -0.347 5.347 20 C 0.402 3.598 21 O -0.479 6.479 22 O -0.286 6.286 23 C 0.091 3.909 24 C -0.237 4.237 25 C -0.196 4.196 26 C -0.237 4.237 27 C -0.198 4.198 28 H 0.098 0.902 29 H 0.126 0.874 30 H 0.109 0.891 31 H 0.205 0.795 32 H 0.120 0.880 33 H 0.243 0.757 34 H -0.232 1.232 35 H -0.213 1.213 36 H 0.183 0.817 37 H 0.251 0.749 38 H 0.094 0.906 39 H 0.123 0.877 40 H 0.114 0.886 41 H 0.164 0.836 42 H 0.251 0.749 43 H 0.081 0.919 44 H 0.105 0.895 45 H 0.085 0.915 46 H 0.087 0.913 47 H 0.117 0.883 48 H 0.088 0.912 49 H 0.085 0.915 50 H 0.105 0.895 51 H 0.079 0.921 52 H 0.152 0.848 53 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -0.208 -1.914 -1.575 2.487 hybrid contribution 0.087 0.630 1.056 1.233 sum -0.121 -1.284 -0.519 1.390 Atomic orbital electron populations 1.22402 0.75037 1.05908 1.04432 1.44085 1.07592 1.04921 1.51994 1.22242 0.89998 0.92177 1.04390 1.19861 0.94769 0.93944 1.13837 1.24409 1.03031 0.96687 0.90504 1.86437 1.97174 1.36701 1.16434 0.93809 0.72831 0.78959 0.86175 1.21430 0.94769 0.94769 1.04468 1.19998 0.90829 0.87582 1.20217 1.17065 0.85194 0.84089 0.75705 1.90792 1.17649 1.85247 1.52367 1.45399 1.10406 1.05935 1.74184 1.21886 0.95379 0.78875 1.04570 1.22263 0.86778 0.97263 0.87470 1.92860 1.65260 1.95639 1.63704 1.24006 1.00699 0.92632 1.00795 1.21935 0.80944 0.96834 0.97837 0.86982 1.44472 1.13266 1.62092 1.14858 1.18264 0.80674 0.77159 0.83721 1.90904 1.81098 1.59347 1.16532 1.86323 1.23550 1.73732 1.45003 1.22359 0.86663 0.92001 0.89854 1.22473 1.03408 0.99781 0.98031 1.21900 0.93629 1.03181 1.00895 1.22477 1.03166 0.95895 1.02192 1.24246 1.03659 0.96308 0.95568 0.90237 0.87434 0.89132 0.79543 0.88042 0.75668 1.23193 1.21302 0.81682 0.74896 0.90604 0.87681 0.88617 0.83605 0.74912 0.91926 0.89491 0.91512 0.91315 0.88272 0.91230 0.91544 0.89462 0.92054 0.84765 0.89761 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.06 10.64 127.77 1.36 1.30 16 2 N -0.41 -0.84 3.16 -534.33 -1.69 -2.53 16 3 C 0.05 0.01 11.29 83.48 0.94 0.96 16 4 C -0.22 -0.02 5.41 -20.12 -0.11 -0.13 16 5 C -0.04 0.02 3.00 71.24 0.21 0.24 16 6 O -0.56 0.11 12.88 -148.98 -1.92 -1.81 16 7 Si 0.78 -1.44 30.64 68.60 2.10 0.66 16 8 C -0.13 0.06 8.84 22.57 0.20 0.26 16 9 C -0.07 -0.22 6.88 40.35 0.28 0.06 16 10 C 0.59 2.35 7.77 86.45 0.67 3.02 16 11 O -0.58 -5.72 14.67 -4.34 -0.06 -5.79 16 12 N -0.71 1.53 5.46 -467.08 -2.55 -1.02 16 13 C 0.12 -0.57 5.35 86.38 0.46 -0.11 16 14 C 0.08 -0.55 1.63 -10.27 -0.02 -0.57 16 15 F -0.19 0.49 15.79 44.97 0.71 1.20 16 16 C -0.14 1.28 7.28 31.12 0.23 1.51 16 17 C 0.13 -0.60 4.33 45.58 0.20 -0.41 16 18 H 0.11 -0.30 7.46 -2.39 -0.02 -0.32 16 19 N -0.69 0.46 5.19 -567.32 -2.94 -2.48 16 20 C 0.65 3.41 8.06 129.79 1.05 4.46 16 21 O -0.59 -5.68 11.48 19.84 0.23 -5.45 16 22 O -0.37 -1.83 9.94 -55.50 -0.55 -2.38 16 23 C 0.13 0.28 1.13 -10.80 -0.01 0.26 16 24 C -0.18 -0.37 8.37 71.98 0.60 0.23 16 25 C -0.14 0.33 8.85 71.98 0.64 0.97 16 26 C -0.18 -0.41 8.37 71.98 0.60 0.19 16 27 C -0.16 1.17 7.34 31.18 0.23 1.40 16 28 H 0.08 -0.11 8.14 -2.38 -0.02 -0.13 16 29 H 0.11 -0.64 8.14 -2.39 -0.02 -0.66 16 30 H 0.09 0.23 6.22 -2.39 -0.01 0.21 16 31 H 0.19 -0.66 8.06 -2.91 -0.02 -0.69 16 32 H 0.10 0.07 7.96 -2.39 -0.02 0.05 16 33 H 0.39 -3.08 8.70 -74.06 -0.64 -3.73 16 34 H -0.30 -1.79 7.11 99.48 0.71 -1.08 16 35 H -0.29 -0.86 7.11 99.48 0.71 -0.15 16 36 H 0.17 -0.90 5.77 -2.91 -0.02 -0.92 16 37 H 0.41 -2.20 7.14 -92.71 -0.66 -2.87 16 38 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 39 H 0.11 -0.73 7.98 -2.39 -0.02 -0.75 16 40 H 0.10 -0.80 8.14 -2.39 -0.02 -0.82 16 41 H 0.15 -1.95 8.10 -2.39 -0.02 -1.97 16 42 H 0.41 -1.02 7.89 -92.71 -0.73 -1.76 16 43 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 44 H 0.09 -0.11 8.14 -2.39 -0.02 -0.13 16 45 H 0.07 0.45 5.88 -2.39 -0.01 0.44 16 46 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 47 H 0.10 -0.56 8.14 -2.39 -0.02 -0.58 16 48 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 49 H 0.07 0.47 5.88 -2.38 -0.01 0.45 16 50 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 51 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 52 H 0.13 -1.44 7.99 -2.39 -0.02 -1.46 16 53 H 0.08 -0.45 8.14 -2.38 -0.02 -0.46 16 Total: 0.00 -23.62 430.68 -0.18 -23.81 By element: Atomic # 1 Polarization: -16.80 SS G_CDS: -1.03 Total: -17.84 kcal Atomic # 6 Polarization: 6.11 SS G_CDS: 7.53 Total: 13.64 kcal Atomic # 7 Polarization: 1.15 SS G_CDS: -7.18 Total: -6.04 kcal Atomic # 8 Polarization: -13.12 SS G_CDS: -2.31 Total: -15.43 kcal Atomic # 9 Polarization: 0.49 SS G_CDS: 0.71 Total: 1.20 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: 2.10 Total: 0.66 kcal Total: -23.62 -0.18 -23.81 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15774724_10803934.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.740 kcal (2) G-P(sol) polarization free energy of solvation -23.623 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.363 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.183 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.806 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.546 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.66 seconds