Wall clock time and date at job start Sun Mar 7 2021 08:21:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.37650 * 125.67738 * 2 1 4 4 C 1.46677 * 126.23427 * 0.02562 * 3 2 1 5 5 O 1.21696 * 119.99965 * 4.65204 * 4 3 2 6 6 N 1.34774 * 120.00327 * 184.65153 * 4 3 2 7 7 C 1.46495 * 120.00346 * 174.94088 * 6 4 3 8 8 C 1.52996 * 109.47252 * 179.97438 * 7 6 4 9 9 F 1.39909 * 112.85007 * 50.33382 * 8 7 6 10 10 C 1.53783 * 113.61491 * 181.52582 * 8 7 6 11 11 C 1.53780 * 87.07978 * 140.06767 * 10 8 7 12 12 H 1.08999 * 113.61584 * 219.93464 * 11 10 8 13 13 N 1.46501 * 113.61351 * 89.11863 * 11 10 8 14 14 C 1.34777 * 119.99850 * 154.99770 * 13 11 10 15 15 O 1.21516 * 120.00143 * 0.02562 * 14 13 11 16 16 O 1.34639 * 119.99797 * 179.97438 * 14 13 11 17 17 C 1.45206 * 116.99754 * 180.02562 * 16 14 13 18 18 C 1.53004 * 109.47227 * 60.00127 * 17 16 14 19 19 C 1.53004 * 109.47087 * 180.02562 * 17 16 14 20 20 C 1.53001 * 109.47270 * 300.00404 * 17 16 14 21 21 C 1.53778 * 87.08268 * 334.56860 * 11 10 8 22 22 C 1.37875 * 107.53182 * 179.74267 * 3 2 1 23 23 C 1.39836 * 107.08623 * 0.22330 * 22 3 2 24 24 C 1.35453 * 107.86228 * 0.02562 * 23 22 3 25 25 C 1.50698 * 125.56017 * 180.02562 * 24 23 22 26 26 O 1.42899 * 109.47521 * 149.97560 * 25 24 23 27 27 Si 1.86298 * 109.47366 * 29.97364 * 25 24 23 28 28 H 1.08998 * 109.47341 * 95.80143 * 1 2 3 29 29 H 1.09006 * 109.46465 * 215.79909 * 1 2 3 30 30 H 1.09000 * 109.47152 * 335.79624 * 1 2 3 31 31 H 0.97009 * 119.99495 * 354.93691 * 6 4 3 32 32 H 1.09003 * 109.47370 * 59.99573 * 7 6 4 33 33 H 1.09002 * 109.47168 * 299.99861 * 7 6 4 34 34 H 1.09001 * 113.61430 * 254.61732 * 10 8 7 35 35 H 1.08998 * 113.61122 * 25.51891 * 10 8 7 36 36 H 0.96995 * 119.99884 * 334.99709 * 13 11 10 37 37 H 1.09003 * 109.46705 * 59.99799 * 18 17 16 38 38 H 1.09000 * 109.47097 * 179.97438 * 18 17 16 39 39 H 1.09000 * 109.47304 * 300.00179 * 18 17 16 40 40 H 1.08998 * 109.46804 * 59.99740 * 19 17 16 41 41 H 1.09000 * 109.47108 * 180.02562 * 19 17 16 42 42 H 1.08996 * 109.46717 * 300.00250 * 19 17 16 43 43 H 1.09000 * 109.47037 * 59.99958 * 20 17 16 44 44 H 1.09000 * 109.46868 * 180.02562 * 20 17 16 45 45 H 1.09008 * 109.46717 * 299.99873 * 20 17 16 46 46 H 1.09001 * 113.61530 * 270.88732 * 21 11 10 47 47 H 1.08995 * 113.61660 * 139.97922 * 21 11 10 48 48 H 1.07998 * 126.45666 * 180.26698 * 22 3 2 49 49 H 1.07999 * 126.06729 * 180.02562 * 23 22 3 50 50 H 1.08999 * 109.47408 * 269.97448 * 25 24 23 51 51 H 0.96706 * 113.99716 * 300.00424 * 26 25 24 52 52 H 1.48507 * 110.00187 * 58.68353 * 27 25 24 53 53 H 1.48505 * 110.00032 * 179.97438 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8124 2.5124 0.0005 5 8 0.6250 2.7647 0.0865 6 7 2.7090 3.5143 -0.0942 7 6 2.2491 4.9007 -0.2054 8 6 3.4585 5.8333 -0.2973 9 9 4.3808 5.4328 -1.2701 10 6 3.0832 7.3224 -0.3804 11 6 4.2711 7.5932 0.5580 12 1 4.0661 8.3506 1.3145 13 7 5.5354 7.8203 -0.1464 14 6 6.5131 8.5399 0.4391 15 8 6.3461 8.9999 1.5514 16 8 7.6753 8.7482 -0.2080 17 6 8.6835 9.5318 0.4834 18 6 9.0610 8.8359 1.7926 19 6 9.9245 9.6614 -0.4021 20 6 8.1271 10.9241 0.7879 21 6 4.0984 6.1515 1.0644 22 6 3.5780 0.6888 0.0059 23 6 3.5522 -0.7093 0.0043 24 6 2.2555 -1.1009 -0.0030 25 6 1.7709 -2.5279 -0.0066 26 8 0.5096 -2.6044 0.6606 27 14 3.0071 -3.6058 0.8769 28 1 -0.3634 -0.1039 -1.0224 29 1 -0.3632 -0.8336 0.6012 30 1 -0.3633 0.9373 0.4213 31 1 3.6588 3.3172 -0.0887 32 1 1.6575 5.1589 0.6730 33 1 1.6369 5.0098 -1.1006 34 1 3.2070 7.7490 -1.3758 35 1 2.1148 7.5540 0.0631 36 1 5.6688 7.4529 -1.0341 37 1 9.4574 7.8439 1.5757 38 1 9.8182 9.4238 2.3114 39 1 8.1768 8.7438 2.4233 40 1 9.6552 10.1574 -1.3347 41 1 10.6815 10.2492 0.1170 42 1 10.3209 8.6696 -0.6194 43 1 7.2429 10.8321 1.4186 44 1 8.8841 11.5124 1.3065 45 1 7.8582 11.4199 -0.1449 46 1 3.4075 6.0630 1.9028 47 1 5.0417 5.6328 1.2353 48 1 4.4583 1.3144 0.0115 49 1 4.4132 -1.3612 0.0081 50 1 1.6592 -2.8711 -1.0351 51 1 0.5341 -2.3136 1.5826 52 1 3.1922 -3.1287 2.2711 53 1 2.5405 -5.0156 0.8809 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15774724_10803936.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:21:19 Heat of formation + Delta-G solvation = -113.194559 kcal Electronic energy + Delta-G solvation = -36155.233246 eV Core-core repulsion = 31138.311673 eV Total energy + Delta-G solvation = -5016.921573 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.194 amu Computer time = 1.59 seconds Orbital eigenvalues (eV) -48.91079 -42.61568 -41.89104 -40.46075 -39.78777 -37.97510 -37.86505 -36.07213 -35.28099 -34.03842 -33.65614 -31.66093 -29.26130 -28.37266 -28.30893 -27.52502 -27.10080 -26.55459 -24.60112 -23.27277 -22.87442 -21.46845 -21.20669 -20.86991 -20.40563 -19.39942 -18.97032 -18.31522 -17.66672 -17.42809 -17.27103 -17.12845 -16.87418 -16.71275 -16.40526 -16.27223 -16.03028 -15.68910 -15.54579 -15.45143 -15.36210 -15.06826 -14.84606 -14.54367 -14.48662 -14.42755 -14.26649 -13.83863 -13.77405 -13.69630 -13.34889 -13.21196 -13.16092 -13.09480 -12.95642 -12.91983 -12.87862 -12.79856 -12.45838 -12.37575 -12.32327 -11.95913 -11.70465 -11.41218 -11.38142 -11.25434 -11.14958 -10.83160 -10.34522 -10.26765 -9.76117 -9.12244 -4.87548 0.31900 1.09079 1.16889 1.48351 1.68333 1.72376 1.75191 1.99545 2.26788 2.28826 2.98634 3.03715 3.08296 3.13778 3.19993 3.55013 3.56037 3.63489 3.71503 3.73283 3.79028 3.93618 3.96757 4.28483 4.29865 4.32877 4.36683 4.47711 4.48827 4.53246 4.56710 4.60911 4.61271 4.61852 4.69187 4.76085 4.78272 4.81953 4.85859 4.86993 4.87558 4.90498 5.06918 5.12702 5.16168 5.21698 5.26503 5.29522 5.40441 5.57229 5.68884 5.96370 6.11544 6.27411 6.31561 6.36407 7.01867 7.28404 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.056 3.944 2 N -0.406 5.406 3 C -0.086 4.086 4 C 0.589 3.411 5 O -0.583 6.583 6 N -0.706 5.706 7 C 0.116 3.884 8 C 0.084 3.916 9 F -0.192 7.192 10 C -0.142 4.142 11 C 0.130 3.870 12 H 0.112 0.888 13 N -0.687 5.687 14 C 0.648 3.352 15 O -0.590 6.590 16 O -0.370 6.370 17 C 0.127 3.873 18 C -0.180 4.180 19 C -0.138 4.138 20 C -0.180 4.180 21 C -0.161 4.161 22 C -0.127 4.127 23 C -0.201 4.201 24 C 0.007 3.993 25 C -0.067 4.067 26 O -0.546 6.546 27 Si 0.815 3.185 28 H 0.068 0.932 29 H 0.111 0.889 30 H 0.088 0.912 31 H 0.415 0.585 32 H 0.101 0.899 33 H 0.077 0.923 34 H 0.098 0.902 35 H 0.145 0.855 36 H 0.415 0.585 37 H 0.061 0.939 38 H 0.087 0.913 39 H 0.064 0.936 40 H 0.069 0.931 41 H 0.099 0.901 42 H 0.069 0.931 43 H 0.065 0.935 44 H 0.087 0.913 45 H 0.061 0.939 46 H 0.131 0.869 47 H 0.081 0.919 48 H 0.171 0.829 49 H 0.184 0.816 50 H 0.132 0.868 51 H 0.386 0.614 52 H -0.291 1.291 53 H -0.296 1.296 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.661 -0.214 -1.314 4.848 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 N -0.079 5.079 3 C -0.199 4.199 4 C 0.378 3.622 5 O -0.466 6.466 6 N -0.358 5.358 7 C -0.007 4.007 8 C 0.065 3.935 9 F -0.172 7.172 10 C -0.181 4.181 11 C 0.026 3.974 12 H 0.130 0.870 13 N -0.346 5.346 14 C 0.402 3.598 15 O -0.480 6.480 16 O -0.285 6.285 17 C 0.091 3.909 18 C -0.237 4.237 19 C -0.195 4.195 20 C -0.237 4.237 21 C -0.199 4.199 22 C -0.153 4.153 23 C -0.225 4.225 24 C -0.110 4.110 25 C -0.174 4.174 26 O -0.355 6.355 27 Si 0.718 3.282 28 H 0.087 0.913 29 H 0.129 0.871 30 H 0.107 0.893 31 H 0.252 0.748 32 H 0.119 0.881 33 H 0.095 0.905 34 H 0.116 0.884 35 H 0.163 0.837 36 H 0.252 0.748 37 H 0.080 0.920 38 H 0.105 0.895 39 H 0.083 0.917 40 H 0.088 0.912 41 H 0.117 0.883 42 H 0.088 0.912 43 H 0.084 0.916 44 H 0.106 0.894 45 H 0.080 0.920 46 H 0.149 0.851 47 H 0.100 0.900 48 H 0.188 0.812 49 H 0.201 0.799 50 H 0.149 0.851 51 H 0.236 0.764 52 H -0.217 1.217 53 H -0.224 1.224 Dipole moment (debyes) X Y Z Total from point charges 3.395 -0.452 -0.683 3.492 hybrid contribution -0.681 0.286 0.147 0.753 sum 2.714 -0.166 -0.536 2.772 Atomic orbital electron populations 1.22538 0.75933 1.05894 1.04140 1.43910 1.07100 1.04555 1.52353 1.20183 0.91548 0.87290 1.20873 1.17145 0.85168 0.84278 0.75578 1.90768 1.17707 1.85325 1.52751 1.45365 1.10346 1.05688 1.74351 1.21865 0.95412 0.79105 1.04350 1.22215 0.87579 0.95466 0.88241 1.92862 1.67838 1.91869 1.64659 1.24009 1.00106 0.91473 1.02490 1.21878 0.81609 0.98218 0.95722 0.87022 1.44449 1.13581 1.54927 1.21644 1.18272 0.80723 0.78175 0.82661 1.90909 1.81740 1.55051 1.20320 1.86323 1.23987 1.69460 1.48686 1.22375 0.85883 0.89864 0.92803 1.22471 1.03195 1.01224 0.96788 1.21897 0.94075 1.03746 0.99819 1.22479 1.03219 0.95272 1.02758 1.24203 1.03076 0.96077 0.96581 1.21696 0.94283 0.95963 1.03396 1.21006 0.95484 0.95454 1.10522 1.21470 0.91531 0.89332 1.08709 1.25261 0.93206 0.94106 1.04824 1.86564 1.30497 1.88379 1.30022 0.93284 0.82961 0.73336 0.78630 0.91289 0.87064 0.89321 0.74789 0.88133 0.90510 0.88351 0.83734 0.74825 0.91952 0.89451 0.91658 0.91231 0.88259 0.91200 0.91644 0.89444 0.91980 0.85135 0.89992 0.81204 0.79863 0.85052 0.76391 1.21744 1.22380 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.24 10.31 127.77 1.32 1.55 16 2 N -0.41 -1.98 3.16 -519.70 -1.64 -3.62 16 3 C -0.09 -0.41 6.89 40.35 0.28 -0.14 16 4 C 0.59 3.53 7.77 86.45 0.67 4.21 16 5 O -0.58 -7.21 14.55 -4.34 -0.06 -7.27 16 6 N -0.71 0.55 5.46 -467.09 -2.55 -2.00 16 7 C 0.12 -0.40 5.36 86.38 0.46 0.06 16 8 C 0.08 -0.49 1.64 -10.27 -0.02 -0.51 16 9 F -0.19 0.43 15.78 44.97 0.71 1.14 16 10 C -0.14 1.17 7.28 31.12 0.23 1.39 16 11 C 0.13 -0.49 4.32 45.52 0.20 -0.29 16 12 H 0.11 -0.19 7.46 -2.39 -0.02 -0.21 16 13 N -0.69 0.12 5.19 -567.61 -2.94 -2.83 16 14 C 0.65 3.73 8.06 129.79 1.05 4.78 16 15 O -0.59 -6.12 11.48 19.79 0.23 -5.89 16 16 O -0.37 -1.90 9.94 -55.48 -0.55 -2.45 16 17 C 0.13 0.30 1.13 -10.79 -0.01 0.29 16 18 C -0.18 -0.44 8.37 71.98 0.60 0.16 16 19 C -0.14 0.33 8.85 71.98 0.64 0.97 16 20 C -0.18 -0.45 8.37 71.98 0.60 0.15 16 21 C -0.16 0.94 7.33 31.12 0.23 1.17 16 22 C -0.13 0.05 10.36 22.57 0.23 0.28 16 23 C -0.20 0.37 9.37 22.01 0.21 0.57 16 24 C 0.01 0.01 6.15 41.34 0.25 0.26 16 25 C -0.07 0.13 2.99 71.24 0.21 0.34 16 26 O -0.55 -0.17 10.11 -148.98 -1.51 -1.67 16 27 Si 0.82 -3.51 31.10 68.60 2.13 -1.38 16 28 H 0.07 0.31 8.14 -2.39 -0.02 0.30 16 29 H 0.11 0.12 5.24 -2.38 -0.01 0.10 16 30 H 0.09 0.67 5.92 -2.39 -0.01 0.66 16 31 H 0.42 -1.79 7.13 -92.70 -0.66 -2.45 16 32 H 0.10 -0.45 7.98 -2.39 -0.02 -0.47 16 33 H 0.08 -0.13 8.14 -2.39 -0.02 -0.15 16 34 H 0.10 -0.79 8.14 -2.39 -0.02 -0.81 16 35 H 0.14 -1.77 8.10 -2.39 -0.02 -1.79 16 36 H 0.41 -0.92 7.88 -92.71 -0.73 -1.65 16 37 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 38 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 39 H 0.06 0.49 5.88 -2.39 -0.01 0.47 16 40 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 41 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 42 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 43 H 0.06 0.49 5.88 -2.39 -0.01 0.48 16 44 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 45 H 0.06 0.12 8.14 -2.38 -0.02 0.10 16 46 H 0.13 -1.12 7.99 -2.39 -0.02 -1.14 16 47 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 48 H 0.17 -1.06 7.45 -2.91 -0.02 -1.09 16 49 H 0.18 -1.62 6.85 -2.91 -0.02 -1.64 16 50 H 0.13 -0.48 7.96 -2.39 -0.02 -0.50 16 51 H 0.39 -1.63 8.29 -74.05 -0.61 -2.24 16 52 H -0.29 -0.39 7.11 99.48 0.71 0.31 16 53 H -0.30 -0.80 7.11 99.48 0.71 -0.09 16 Total: 0.00 -23.89 425.10 -0.04 -23.93 By element: Atomic # 1 Polarization: -12.21 SS G_CDS: -1.00 Total: -13.21 kcal Atomic # 6 Polarization: 8.11 SS G_CDS: 7.15 Total: 15.25 kcal Atomic # 7 Polarization: -1.31 SS G_CDS: -7.14 Total: -8.45 kcal Atomic # 8 Polarization: -15.39 SS G_CDS: -1.89 Total: -17.29 kcal Atomic # 9 Polarization: 0.43 SS G_CDS: 0.71 Total: 1.14 kcal Atomic # 14 Polarization: -3.51 SS G_CDS: 2.13 Total: -1.38 kcal Total: -23.89 -0.04 -23.93 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15774724_10803936.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.262 kcal (2) G-P(sol) polarization free energy of solvation -23.895 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.157 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.037 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.932 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.195 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.59 seconds