Wall clock time and date at job start Sun Mar 7 2021 08:22:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 C 1.53005 * 109.47333 * 2 1 4 4 C 1.52998 * 109.47551 * 239.99805 * 2 1 3 5 5 O 1.45201 * 109.47085 * 119.99822 * 2 1 3 6 6 C 1.34638 * 116.99939 * 59.99907 * 5 2 1 7 7 O 1.21512 * 119.99889 * 0.02562 * 6 5 2 8 8 N 1.34776 * 119.99854 * 180.02562 * 6 5 2 9 9 C 1.46505 * 119.99597 * 180.02562 * 8 6 5 10 10 H 1.09000 * 112.85296 * 23.80222 * 9 8 6 11 11 C 1.53781 * 113.61334 * 154.99978 * 9 8 6 12 12 C 1.53786 * 87.17350 * 89.07333 * 11 9 8 13 13 F 1.39902 * 113.61196 * 270.92541 * 12 11 9 14 14 C 1.52990 * 113.61464 * 140.02626 * 12 11 9 15 15 N 1.46508 * 109.47163 * 179.97438 * 14 12 11 16 16 C 1.34775 * 120.00062 * 179.97438 * 15 14 12 17 17 O 1.21552 * 120.00061 * 0.02562 * 16 15 14 18 18 C 1.47846 * 120.00090 * 179.97438 * 16 15 14 19 19 C 1.39549 * 120.13492 * 359.72626 * 18 16 15 20 20 C 1.38070 * 119.83900 * 179.71961 * 19 18 16 21 21 Br 1.89101 * 119.94186 * 180.27831 * 20 19 18 22 22 C 1.38431 * 120.12277 * 0.55377 * 20 19 18 23 23 C 1.38357 * 120.28113 * 359.72498 * 22 20 19 24 24 C 1.50705 * 119.92176 * 180.02562 * 23 22 20 25 25 O 1.42900 * 109.47498 * 119.97433 * 24 23 22 26 26 Si 1.86304 * 109.46961 * 359.97438 * 24 23 22 27 27 C 1.37939 * 120.15932 * 359.97438 * 23 22 20 28 28 C 1.53781 * 113.61146 * 252.49455 * 9 8 6 29 29 H 1.08999 * 109.47695 * 300.00306 * 1 2 3 30 30 H 1.09000 * 109.47073 * 59.99781 * 1 2 3 31 31 H 1.08997 * 109.47364 * 179.97438 * 1 2 3 32 32 H 1.09003 * 109.47433 * 179.97438 * 3 2 1 33 33 H 1.09000 * 109.47220 * 300.00129 * 3 2 1 34 34 H 1.09002 * 109.47010 * 60.00025 * 3 2 1 35 35 H 1.08997 * 109.47228 * 300.00624 * 4 2 1 36 36 H 1.09009 * 109.46819 * 60.00151 * 4 2 1 37 37 H 1.08993 * 109.47281 * 180.02562 * 4 2 1 38 38 H 0.96995 * 120.00232 * 359.97438 * 8 6 5 39 39 H 1.09002 * 113.61445 * 203.66333 * 11 9 8 40 40 H 1.09002 * 113.61408 * 334.48063 * 11 9 8 41 41 H 1.09004 * 109.47351 * 299.99292 * 14 12 11 42 42 H 1.08997 * 109.47511 * 59.99716 * 14 12 11 43 43 H 0.96997 * 119.99668 * 359.97438 * 15 14 12 44 44 H 1.07994 * 120.08050 * 0.02562 * 19 18 16 45 45 H 1.07998 * 119.85662 * 179.74117 * 22 20 19 46 46 H 1.08998 * 109.46963 * 239.97766 * 24 23 22 47 47 H 0.96695 * 113.99511 * 300.00313 * 25 24 23 48 48 H 1.48498 * 109.99974 * 58.67980 * 26 24 23 49 49 H 1.48493 * 110.00040 * 180.02562 * 26 24 23 50 50 H 1.07998 * 120.06475 * 180.02562 * 27 23 22 51 51 H 1.09005 * 113.61471 * 25.43638 * 28 9 8 52 52 H 1.08996 * 113.61178 * 156.24980 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0139 -0.6844 1.1856 6 6 1.6521 -1.9723 1.3384 7 8 0.9515 -2.5097 0.5036 8 7 2.0671 -2.6653 2.4173 9 6 1.6738 -4.0668 2.5832 10 1 1.4223 -4.5505 1.6393 11 6 2.6468 -4.8808 3.4524 12 6 1.8072 -4.4461 4.6653 13 9 2.2295 -3.2406 5.2360 14 6 1.6037 -5.5554 5.6990 15 7 0.7965 -5.0453 6.8102 16 6 0.4875 -5.8521 7.8446 17 8 0.8788 -7.0028 7.8559 18 6 -0.3266 -5.3371 8.9662 19 6 -0.7717 -4.0146 8.9595 20 6 -1.5364 -3.5417 10.0073 21 35 -2.1477 -1.7523 9.9974 22 6 -1.8517 -4.3735 11.0680 23 6 -1.4083 -5.6840 11.0826 24 6 -1.7568 -6.5827 12.2411 25 8 -2.5004 -7.7065 11.7654 26 14 -2.7832 -5.6360 13.4745 27 6 -0.6487 -6.1703 10.0389 28 6 0.6270 -4.2861 3.6882 29 1 -0.3634 0.5139 0.8899 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3634 -1.0276 -0.0005 32 1 3.1300 1.4425 0.0005 33 1 1.6767 1.9564 -0.8900 34 1 1.6767 1.9564 0.8900 35 1 1.6767 -1.7489 -1.2492 36 1 1.6767 -0.2074 -2.1392 37 1 3.1299 -0.7216 -1.2489 38 1 2.6267 -2.2365 3.0834 39 1 2.6124 -5.9531 3.2593 40 1 3.6622 -4.4844 3.4595 41 1 1.0905 -6.3966 5.2331 42 1 2.5726 -5.8839 6.0751 43 1 0.4846 -4.1269 6.8014 44 1 -0.5227 -3.3639 8.1343 45 1 -2.4467 -3.9980 11.8873 46 1 -0.8412 -6.9293 12.7203 47 1 -3.3295 -7.4721 11.3265 48 1 -4.0194 -5.1307 12.8251 49 1 -3.1330 -6.5109 14.6221 50 1 -0.3037 -7.1936 10.0517 51 1 0.0114 -3.4088 3.8868 52 1 0.0394 -5.1950 3.5587 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15774724_12335870.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:22:21 Heat of formation + Delta-G solvation = -131.988869 kcal Electronic energy + Delta-G solvation = -37293.157693 eV Core-core repulsion = 32028.340525 eV Total energy + Delta-G solvation = -5264.817168 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 459.094 amu Computer time = 1.65 seconds Orbital eigenvalues (eV) -48.92914 -41.90477 -41.60057 -40.20510 -39.75660 -37.90696 -37.82070 -36.09089 -35.29064 -33.99395 -33.63798 -33.10116 -30.47836 -29.28874 -28.38553 -28.32160 -27.09635 -27.03399 -25.50366 -24.25338 -23.00250 -22.81737 -21.61446 -21.21037 -20.63362 -19.50394 -19.23322 -18.20077 -17.76780 -17.65940 -17.44679 -17.25943 -17.11119 -16.70482 -16.52504 -16.48372 -16.33331 -16.01540 -15.85919 -15.55234 -15.52921 -15.38282 -14.99950 -14.75884 -14.63345 -14.49644 -14.27209 -14.15675 -13.78260 -13.67475 -13.36437 -13.30666 -13.17162 -13.10965 -13.04141 -12.93159 -12.88997 -12.80714 -12.47000 -12.33535 -12.31552 -11.98870 -11.86256 -11.75741 -11.46882 -11.42343 -11.38304 -11.21729 -11.16024 -10.73975 -10.46853 -10.29232 -10.18313 -9.92657 -4.97650 -0.54282 -0.18297 0.41660 1.08123 1.20064 1.48975 1.54870 1.67122 1.82731 1.93636 2.43497 2.97067 3.02641 3.04223 3.16733 3.24288 3.32409 3.44887 3.55187 3.62565 3.71980 3.77799 3.79007 3.85486 3.92392 3.94517 4.18741 4.26709 4.29926 4.36461 4.47342 4.53964 4.57825 4.59631 4.60486 4.61599 4.74122 4.74816 4.77335 4.80723 4.84291 4.85775 4.86875 4.89341 4.90542 5.05507 5.10684 5.14980 5.25285 5.28171 5.36169 5.39470 5.56188 6.22788 6.30470 6.41880 6.93388 7.27374 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.648 3.352 7 O -0.589 6.589 8 N -0.687 5.687 9 C 0.129 3.871 10 H 0.112 0.888 11 C -0.142 4.142 12 C 0.082 3.918 13 F -0.192 7.192 14 C 0.112 3.888 15 N -0.713 5.713 16 C 0.563 3.437 17 O -0.566 6.566 18 C -0.137 4.137 19 C -0.046 4.046 20 C -0.099 4.099 21 Br -0.030 7.030 22 C -0.060 4.060 23 C -0.113 4.113 24 C -0.082 4.082 25 O -0.545 6.545 26 Si 0.759 3.241 27 C -0.026 4.026 28 C -0.161 4.161 29 H 0.061 0.939 30 H 0.087 0.913 31 H 0.065 0.935 32 H 0.069 0.931 33 H 0.099 0.901 34 H 0.069 0.931 35 H 0.065 0.935 36 H 0.087 0.913 37 H 0.061 0.939 38 H 0.414 0.586 39 H 0.145 0.855 40 H 0.098 0.902 41 H 0.103 0.897 42 H 0.081 0.919 43 H 0.412 0.588 44 H 0.156 0.844 45 H 0.157 0.843 46 H 0.133 0.867 47 H 0.388 0.612 48 H -0.274 1.274 49 H -0.296 1.296 50 H 0.135 0.865 51 H 0.080 0.920 52 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.021 4.537 -0.022 4.650 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.401 3.599 7 O -0.480 6.480 8 N -0.346 5.346 9 C 0.025 3.975 10 H 0.130 0.870 11 C -0.180 4.180 12 C 0.063 3.937 13 F -0.172 7.172 14 C -0.011 4.011 15 N -0.365 5.365 16 C 0.351 3.649 17 O -0.446 6.446 18 C -0.141 4.141 19 C -0.066 4.066 20 C -0.179 4.179 21 Br 0.056 6.944 22 C -0.079 4.079 23 C -0.114 4.114 24 C -0.190 4.190 25 O -0.353 6.353 26 Si 0.663 3.337 27 C -0.046 4.046 28 C -0.200 4.200 29 H 0.080 0.920 30 H 0.105 0.895 31 H 0.084 0.916 32 H 0.088 0.912 33 H 0.117 0.883 34 H 0.088 0.912 35 H 0.084 0.916 36 H 0.105 0.895 37 H 0.080 0.920 38 H 0.252 0.748 39 H 0.163 0.837 40 H 0.116 0.884 41 H 0.121 0.879 42 H 0.099 0.901 43 H 0.250 0.750 44 H 0.173 0.827 45 H 0.174 0.826 46 H 0.150 0.850 47 H 0.237 0.763 48 H -0.200 1.200 49 H -0.224 1.224 50 H 0.153 0.847 51 H 0.099 0.901 52 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 0.500 4.006 0.150 4.040 hybrid contribution -0.390 -0.387 -0.522 0.758 sum 0.110 3.619 -0.373 3.640 Atomic orbital electron populations 1.22468 0.93946 1.03757 1.03507 1.22368 0.94521 0.92552 0.81468 1.21899 1.02460 0.90940 1.04244 1.22475 1.01641 1.02304 0.97293 1.86321 1.71535 1.23267 1.47344 1.18277 0.78540 0.80805 0.82237 1.90909 1.42028 1.70834 1.44230 1.44452 1.54998 1.12034 1.23126 1.21886 0.96111 0.79371 1.00139 0.87037 1.24005 0.99491 1.03795 0.90755 1.22281 0.98228 0.81056 0.92113 1.92858 1.91093 1.47052 1.86242 1.21921 0.96989 0.96059 0.86178 1.45687 1.54195 1.15944 1.20660 1.18249 0.79439 0.84995 0.82251 1.90812 1.55088 1.19088 1.79641 1.19853 1.02838 0.94786 0.96577 1.21427 0.93567 0.94110 0.97489 1.21729 1.04193 0.93289 0.98660 1.96863 1.87843 1.10827 1.98900 1.21385 0.97126 0.92426 0.96994 1.20274 0.99193 0.94468 0.97511 1.25277 1.03211 0.91745 0.98816 1.86613 1.38496 1.31934 1.78235 0.94190 0.80552 0.82794 0.76155 1.21260 0.92615 0.99891 0.90814 1.24268 0.96598 1.05450 0.93702 0.92000 0.89458 0.91650 0.91211 0.88265 0.91238 0.91633 0.89450 0.91959 0.74841 0.83660 0.88376 0.87872 0.90111 0.75038 0.82655 0.82610 0.84964 0.76266 1.20047 1.22405 0.84740 0.90119 0.85002 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.44 8.37 71.98 0.60 0.17 16 2 C 0.13 0.29 1.13 -10.80 -0.01 0.28 16 3 C -0.14 0.33 8.85 71.98 0.64 0.97 16 4 C -0.18 -0.44 8.37 71.98 0.60 0.17 16 5 O -0.37 -1.85 9.94 -55.47 -0.55 -2.40 16 6 C 0.65 3.59 8.06 129.79 1.05 4.63 16 7 O -0.59 -5.99 11.48 19.80 0.23 -5.77 16 8 N -0.69 0.35 5.19 -567.59 -2.95 -2.59 16 9 C 0.13 -0.55 4.32 45.52 0.20 -0.35 16 10 H 0.11 -0.23 7.46 -2.39 -0.02 -0.25 16 11 C -0.14 1.26 7.27 31.12 0.23 1.48 16 12 C 0.08 -0.56 1.67 -10.18 -0.02 -0.57 16 13 F -0.19 0.61 15.72 44.97 0.71 1.31 16 14 C 0.11 -0.54 5.37 86.37 0.46 -0.08 16 15 N -0.71 1.95 5.42 -465.97 -2.52 -0.57 16 16 C 0.56 1.81 7.77 86.79 0.67 2.48 16 17 O -0.57 -6.14 16.35 -3.88 -0.06 -6.21 16 18 C -0.14 -0.10 5.87 -20.09 -0.12 -0.22 16 19 C -0.05 0.13 9.28 22.55 0.21 0.34 16 20 C -0.10 0.23 6.22 22.28 0.14 0.37 16 21 Br -0.03 0.07 33.69 -20.37 -0.69 -0.62 16 22 C -0.06 0.19 8.41 22.34 0.19 0.37 16 23 C -0.11 0.18 5.38 -19.91 -0.11 0.08 16 24 C -0.08 0.18 2.82 71.24 0.20 0.38 16 25 O -0.54 -0.74 12.76 -148.98 -1.90 -2.64 16 26 Si 0.76 -2.83 29.78 68.60 2.04 -0.79 16 27 C -0.03 -0.04 9.15 22.53 0.21 0.16 16 28 C -0.16 1.06 7.34 31.21 0.23 1.29 16 29 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 30 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 31 H 0.06 0.48 5.88 -2.39 -0.01 0.47 16 32 H 0.07 -0.18 8.14 -2.39 -0.02 -0.19 16 33 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 34 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 35 H 0.06 0.48 5.88 -2.39 -0.01 0.47 16 36 H 0.09 -0.08 8.14 -2.38 -0.02 -0.10 16 37 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 38 H 0.41 -1.07 7.88 -92.71 -0.73 -1.80 16 39 H 0.15 -1.89 8.10 -2.39 -0.02 -1.91 16 40 H 0.10 -0.84 8.14 -2.39 -0.02 -0.86 16 41 H 0.10 -0.63 7.95 -2.38 -0.02 -0.65 16 42 H 0.08 -0.26 8.14 -2.39 -0.02 -0.28 16 43 H 0.41 -2.55 6.22 -92.71 -0.58 -3.13 16 44 H 0.16 -1.10 6.40 -2.91 -0.02 -1.12 16 45 H 0.16 -0.98 4.86 -2.91 -0.01 -1.00 16 46 H 0.13 -0.50 7.96 -2.39 -0.02 -0.52 16 47 H 0.39 -1.73 8.70 -74.06 -0.64 -2.38 16 48 H -0.27 0.14 7.11 99.48 0.71 0.85 16 49 H -0.30 -1.22 7.11 99.48 0.71 -0.51 16 50 H 0.13 0.60 7.65 -2.91 -0.02 0.58 16 51 H 0.08 -0.34 8.14 -2.38 -0.02 -0.36 16 52 H 0.13 -1.26 7.98 -2.39 -0.02 -1.28 16 Total: 0.00 -21.73 444.55 -1.24 -22.97 By element: Atomic # 1 Polarization: -13.75 SS G_CDS: -0.91 Total: -14.66 kcal Atomic # 6 Polarization: 6.59 SS G_CDS: 5.37 Total: 11.96 kcal Atomic # 7 Polarization: 2.30 SS G_CDS: -5.47 Total: -3.17 kcal Atomic # 8 Polarization: -14.72 SS G_CDS: -2.29 Total: -17.01 kcal Atomic # 9 Polarization: 0.61 SS G_CDS: 0.71 Total: 1.31 kcal Atomic # 14 Polarization: -2.83 SS G_CDS: 2.04 Total: -0.79 kcal Atomic # 35 Polarization: 0.07 SS G_CDS: -0.69 Total: -0.62 kcal Total: -21.73 -1.24 -22.97 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15774724_12335870.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.020 kcal (2) G-P(sol) polarization free energy of solvation -21.731 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.751 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.238 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.969 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.989 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.65 seconds