Wall clock time and date at job start Sun Mar 7 2021 08:22:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 C 1.53003 * 109.46980 * 2 1 4 4 C 1.52996 * 109.47116 * 239.99659 * 2 1 3 5 5 O 1.45200 * 109.46710 * 119.99419 * 2 1 3 6 6 C 1.34643 * 116.99836 * 60.00267 * 5 2 1 7 7 O 1.21509 * 120.00121 * 0.02562 * 6 5 2 8 8 N 1.34779 * 119.99591 * 179.97438 * 6 5 2 9 9 C 1.46500 * 119.99563 * 180.02562 * 8 6 5 10 10 H 1.08998 * 112.85046 * 336.18724 * 9 8 6 11 11 C 1.53783 * 113.61804 * 107.50016 * 9 8 6 12 12 C 1.53788 * 87.08055 * 89.11576 * 11 9 8 13 13 F 1.39905 * 113.68501 * 270.87280 * 12 11 9 14 14 C 1.52995 * 113.61555 * 139.98424 * 12 11 9 15 15 N 1.46496 * 109.47343 * 87.49700 * 14 12 11 16 16 C 1.34776 * 119.99995 * 179.97438 * 15 14 12 17 17 O 1.21570 * 120.00188 * 0.02562 * 16 15 14 18 18 C 1.47698 * 119.99960 * 180.02562 * 16 15 14 19 19 C 1.39806 * 120.15332 * 179.97438 * 18 16 15 20 20 F 1.35093 * 120.08343 * 0.02562 * 19 18 16 21 21 C 1.38315 * 119.82775 * 180.02562 * 19 18 16 22 22 C 1.38185 * 120.14745 * 359.74592 * 21 19 18 23 23 C 1.50701 * 119.84349 * 180.27492 * 22 21 19 24 24 O 1.42902 * 109.47092 * 255.24064 * 23 22 21 25 25 Si 1.86303 * 109.46888 * 15.23438 * 23 22 21 26 26 C 1.38658 * 120.31196 * 0.51345 * 22 21 19 27 27 F 1.35104 * 119.91379 * 179.76049 * 26 22 21 28 28 C 1.38067 * 120.16855 * 359.48768 * 26 22 21 29 29 C 1.53778 * 87.08169 * 25.43065 * 12 11 9 30 30 H 1.09000 * 109.47292 * 300.00173 * 1 2 3 31 31 H 1.09002 * 109.46854 * 60.00597 * 1 2 3 32 32 H 1.09000 * 109.47182 * 180.02562 * 1 2 3 33 33 H 1.08998 * 109.46993 * 179.97438 * 3 2 1 34 34 H 1.09002 * 109.46839 * 299.99412 * 3 2 1 35 35 H 1.09000 * 109.47249 * 59.99801 * 3 2 1 36 36 H 1.08998 * 109.47128 * 299.99464 * 4 2 1 37 37 H 1.08997 * 109.47080 * 60.00349 * 4 2 1 38 38 H 1.09000 * 109.46508 * 180.02562 * 4 2 1 39 39 H 0.97001 * 120.00167 * 359.97438 * 8 6 5 40 40 H 1.08992 * 113.61154 * 334.56243 * 11 9 8 41 41 H 1.08998 * 113.61146 * 203.66222 * 11 9 8 42 42 H 1.09004 * 109.46837 * 327.49539 * 14 12 11 43 43 H 1.09003 * 109.47082 * 207.50048 * 14 12 11 44 44 H 0.96996 * 119.99904 * 0.02562 * 15 14 12 45 45 H 1.08002 * 119.92220 * 179.97438 * 21 19 18 46 46 H 1.08995 * 109.47326 * 135.23738 * 23 22 21 47 47 H 0.96700 * 113.99816 * 180.02562 * 24 23 22 48 48 H 1.48494 * 110.00421 * 299.99954 * 25 23 22 49 49 H 1.48496 * 109.99647 * 61.32338 * 25 23 22 50 50 H 1.07995 * 120.07703 * 180.27484 * 28 26 22 51 51 H 1.08997 * 113.61667 * 89.11920 * 29 12 11 52 52 H 1.09001 * 113.61837 * 219.93740 * 29 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7213 -1.2492 5 8 2.0140 -0.6844 1.1857 6 6 1.6522 -1.9722 1.3385 7 8 0.9516 -2.5097 0.5037 8 7 2.0679 -2.6655 2.4169 9 6 1.6747 -4.0670 2.5829 10 1 0.7603 -4.3166 2.0448 11 6 2.8232 -5.0615 2.3444 12 6 3.1509 -4.9207 3.8403 13 9 4.0446 -3.8826 4.1246 14 6 3.5410 -6.2403 4.5091 15 7 4.9820 -6.4571 4.3581 16 6 5.5546 -7.5632 4.8728 17 8 4.8753 -8.3814 5.4620 18 6 7.0075 -7.7815 4.7211 19 6 7.6049 -8.9275 5.2542 20 9 6.8546 -9.8398 5.9098 21 6 8.9662 -9.1248 5.1087 22 6 9.7340 -8.1950 4.4338 23 6 11.2155 -8.4199 4.2738 24 8 11.9268 -7.5628 5.1691 25 14 11.6194 -10.1966 4.6629 26 6 9.1485 -7.0537 3.9073 27 9 9.9076 -6.1475 3.2531 28 6 7.7909 -6.8436 4.0450 29 6 1.6759 -4.5378 4.0469 30 1 -0.3634 0.5139 0.8900 31 1 -0.3633 0.5138 -0.8901 32 1 -0.3633 -1.0277 0.0005 33 1 3.1300 1.4425 0.0005 34 1 1.6768 1.9563 -0.8901 35 1 1.6767 1.9564 0.8900 36 1 1.6768 -1.7490 -1.2491 37 1 1.6768 -0.2075 -2.1391 38 1 3.1301 -0.7216 -1.2488 39 1 2.6281 -2.2368 3.0828 40 1 3.6041 -4.6774 1.6883 41 1 2.4855 -6.0590 2.0634 42 1 2.9989 -7.0604 4.0382 43 1 3.2888 -6.1991 5.5687 44 1 5.5240 -5.8041 3.8884 45 1 9.4294 -10.0094 5.5202 46 1 11.5082 -8.1971 3.2479 47 1 12.8882 -7.6538 5.1201 48 1 11.2252 -10.5131 6.0591 49 1 10.9107 -11.0970 3.7184 50 1 7.3357 -5.9563 3.6306 51 1 1.0247 -5.3921 4.2314 52 1 1.5307 -3.7318 4.7663 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15774724_12360598.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:22:36 Heat of formation + Delta-G solvation = -218.519802 kcal Electronic energy + Delta-G solvation = -40559.203580 eV Core-core repulsion = 34691.544201 eV Total energy + Delta-G solvation = -5867.659380 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 417.164 amu Computer time = 1.88 seconds Orbital eigenvalues (eV) -50.30473 -50.21310 -48.97341 -41.91707 -41.46723 -40.13786 -39.77593 -37.91668 -37.64975 -36.15676 -35.31363 -34.10565 -33.46953 -31.56372 -29.57455 -28.39317 -28.33034 -27.59407 -27.10046 -24.85757 -24.54672 -23.65013 -22.96429 -22.01638 -21.22935 -20.76421 -19.88089 -19.36317 -18.87785 -18.62752 -18.55915 -17.78152 -17.63602 -17.38679 -17.32734 -17.25078 -16.95720 -16.64527 -16.50900 -16.44649 -16.31324 -15.99048 -15.91220 -15.74581 -15.54482 -15.39676 -15.37735 -15.12648 -14.61418 -14.50271 -14.48295 -13.98676 -13.92480 -13.86275 -13.74946 -13.64791 -13.37106 -13.20174 -13.17668 -13.12231 -12.94210 -12.89965 -12.82348 -12.47958 -12.43112 -12.34520 -12.12660 -11.78174 -11.44926 -11.43258 -11.30073 -11.17116 -10.79502 -10.44925 -10.41213 -10.29257 -9.98394 -5.01988 -0.97550 -0.49778 1.06884 1.14900 1.21876 1.60286 1.63539 1.67734 1.87635 2.07300 2.59635 2.67709 2.90787 2.95291 3.00978 3.01132 3.10697 3.19485 3.34934 3.53206 3.54765 3.62117 3.71118 3.71842 3.76936 3.91555 3.96773 4.17568 4.21951 4.28009 4.31719 4.38071 4.46084 4.50218 4.54084 4.58878 4.59000 4.59654 4.59860 4.73983 4.76188 4.78841 4.81626 4.84774 4.85018 4.87847 5.04480 5.11629 5.20834 5.24497 5.27133 5.38021 5.54971 6.09725 6.29036 6.79340 6.80063 7.26064 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.648 3.352 7 O -0.589 6.589 8 N -0.687 5.687 9 C 0.129 3.871 10 H 0.112 0.888 11 C -0.161 4.161 12 C 0.082 3.918 13 F -0.192 7.192 14 C 0.111 3.889 15 N -0.707 5.707 16 C 0.563 3.437 17 O -0.555 6.555 18 C -0.147 4.147 19 C 0.140 3.860 20 F -0.123 7.123 21 C -0.146 4.146 22 C -0.061 4.061 23 C -0.088 4.088 24 O -0.558 6.558 25 Si 0.782 3.218 26 C 0.108 3.892 27 F -0.120 7.120 28 C -0.075 4.075 29 C -0.142 4.142 30 H 0.061 0.939 31 H 0.087 0.913 32 H 0.065 0.935 33 H 0.069 0.931 34 H 0.099 0.901 35 H 0.069 0.931 36 H 0.065 0.935 37 H 0.087 0.913 38 H 0.061 0.939 39 H 0.414 0.586 40 H 0.081 0.919 41 H 0.133 0.867 42 H 0.105 0.895 43 H 0.083 0.917 44 H 0.414 0.586 45 H 0.153 0.847 46 H 0.104 0.896 47 H 0.410 0.590 48 H -0.286 1.286 49 H -0.282 1.282 50 H 0.183 0.817 51 H 0.146 0.854 52 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.518 2.647 -2.825 5.950 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.401 3.599 7 O -0.480 6.480 8 N -0.346 5.346 9 C 0.025 3.975 10 H 0.130 0.870 11 C -0.200 4.200 12 C 0.064 3.936 13 F -0.172 7.172 14 C -0.012 4.012 15 N -0.360 5.360 16 C 0.349 3.651 17 O -0.434 6.434 18 C -0.152 4.152 19 C 0.119 3.881 20 F -0.101 7.101 21 C -0.164 4.164 22 C -0.062 4.062 23 C -0.197 4.197 24 O -0.369 6.369 25 Si 0.686 3.314 26 C 0.088 3.912 27 F -0.098 7.098 28 C -0.094 4.094 29 C -0.181 4.181 30 H 0.080 0.920 31 H 0.106 0.894 32 H 0.084 0.916 33 H 0.088 0.912 34 H 0.118 0.882 35 H 0.088 0.912 36 H 0.084 0.916 37 H 0.106 0.894 38 H 0.080 0.920 39 H 0.252 0.748 40 H 0.100 0.900 41 H 0.151 0.849 42 H 0.123 0.877 43 H 0.101 0.899 44 H 0.252 0.748 45 H 0.170 0.830 46 H 0.122 0.878 47 H 0.262 0.738 48 H -0.213 1.213 49 H -0.209 1.209 50 H 0.200 0.800 51 H 0.164 0.836 52 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges 2.777 1.363 -2.487 3.969 hybrid contribution 0.119 0.821 0.074 0.833 sum 2.897 2.184 -2.413 4.356 Atomic orbital electron populations 1.22477 0.93911 1.03783 1.03541 1.22376 0.94549 0.92551 0.81456 1.21898 1.02439 0.90940 1.04264 1.22469 1.01602 1.02297 0.97302 1.86322 1.71500 1.23295 1.47371 1.18277 0.78495 0.80740 0.82341 1.90908 1.42116 1.70985 1.43966 1.44455 1.54927 1.11901 1.23358 1.21888 0.99151 0.78236 0.98228 0.86978 1.24246 0.99229 1.02454 0.94080 1.22250 0.89691 0.84134 0.97572 1.92854 1.69856 1.59910 1.94588 1.21994 0.80390 0.96244 1.02597 1.45605 1.10154 1.22718 1.57485 1.17866 0.86383 0.81936 0.78875 1.90878 1.64377 1.45353 1.42759 1.19811 0.94508 0.96118 1.04726 1.17721 0.88839 0.87394 0.94101 1.91595 1.76111 1.64579 1.77808 1.20956 0.91810 1.01836 1.01839 1.19768 0.96858 0.93044 0.96577 1.24866 0.87615 1.08762 0.98464 1.86442 1.25244 1.63749 1.61491 0.93855 0.89519 0.70983 0.77005 1.17273 0.88869 0.88020 0.97048 1.91576 1.75390 1.64828 1.78040 1.21397 0.91376 0.99731 0.96875 1.24017 0.93618 1.04525 0.95908 0.91975 0.89427 0.91633 0.91241 0.88238 0.91230 0.91646 0.89427 0.92005 0.74843 0.90038 0.84869 0.87689 0.89918 0.74770 0.82981 0.87839 0.73799 1.21322 1.20872 0.79981 0.83637 0.88364 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.46 8.37 71.98 0.60 0.15 16 2 C 0.13 0.31 1.13 -10.79 -0.01 0.30 16 3 C -0.14 0.32 8.85 71.98 0.64 0.95 16 4 C -0.18 -0.45 8.37 71.98 0.60 0.15 16 5 O -0.37 -1.90 9.94 -55.52 -0.55 -2.45 16 6 C 0.65 3.67 8.06 129.79 1.05 4.72 16 7 O -0.59 -6.06 11.48 19.81 0.23 -5.83 16 8 N -0.69 0.27 5.19 -567.59 -2.95 -2.68 16 9 C 0.13 -0.54 4.32 45.52 0.20 -0.34 16 10 H 0.11 -0.23 7.46 -2.39 -0.02 -0.24 16 11 C -0.16 1.05 7.33 31.12 0.23 1.28 16 12 C 0.08 -0.54 1.73 -10.27 -0.02 -0.56 16 13 F -0.19 0.61 15.50 44.97 0.70 1.31 16 14 C 0.11 -0.49 5.42 86.38 0.47 -0.02 16 15 N -0.71 1.35 5.40 -466.12 -2.52 -1.16 16 16 C 0.56 3.05 7.77 86.74 0.67 3.73 16 17 O -0.55 -7.51 15.34 -3.94 -0.06 -7.58 16 18 C -0.15 -0.59 5.88 -20.06 -0.12 -0.71 16 19 C 0.14 1.05 7.28 22.67 0.17 1.21 16 20 F -0.12 -1.54 15.55 44.97 0.70 -0.84 16 21 C -0.15 -0.67 8.62 22.28 0.19 -0.48 16 22 C -0.06 -0.14 5.30 -19.78 -0.10 -0.25 16 23 C -0.09 0.25 2.43 71.24 0.17 0.42 16 24 O -0.56 1.31 12.86 -148.98 -1.92 -0.61 16 25 Si 0.78 -3.54 30.20 68.60 2.07 -1.47 16 26 C 0.11 0.15 7.23 22.33 0.16 0.31 16 27 F -0.12 -0.24 16.73 44.97 0.75 0.52 16 28 C -0.07 0.08 9.52 22.57 0.21 0.30 16 29 C -0.14 1.23 7.28 31.12 0.23 1.45 16 30 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 31 H 0.09 -0.08 8.14 -2.39 -0.02 -0.09 16 32 H 0.06 0.49 5.88 -2.39 -0.01 0.47 16 33 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 34 H 0.10 -0.56 8.14 -2.39 -0.02 -0.58 16 35 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 36 H 0.06 0.49 5.88 -2.39 -0.01 0.47 16 37 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 38 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 39 H 0.41 -1.02 7.88 -92.71 -0.73 -1.75 16 40 H 0.08 -0.34 8.14 -2.39 -0.02 -0.36 16 41 H 0.13 -1.28 7.90 -2.39 -0.02 -1.30 16 42 H 0.11 -0.59 7.84 -2.38 -0.02 -0.61 16 43 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 44 H 0.41 -2.54 6.06 -92.71 -0.56 -3.10 16 45 H 0.15 0.54 4.87 -2.91 -0.01 0.53 16 46 H 0.10 -0.68 7.89 -2.39 -0.02 -0.70 16 47 H 0.41 -5.32 8.74 -74.06 -0.65 -5.97 16 48 H -0.29 -0.62 6.73 99.48 0.67 0.05 16 49 H -0.28 -0.27 7.11 99.48 0.71 0.43 16 50 H 0.18 -1.44 6.40 -2.91 -0.02 -1.46 16 51 H 0.15 -1.85 8.10 -2.39 -0.02 -1.87 16 52 H 0.10 -0.82 8.14 -2.39 -0.02 -0.84 16 Total: 0.00 -26.47 433.26 0.88 -25.59 By element: Atomic # 1 Polarization: -16.51 SS G_CDS: -0.91 Total: -17.42 kcal Atomic # 6 Polarization: 7.29 SS G_CDS: 5.34 Total: 12.63 kcal Atomic # 7 Polarization: 1.62 SS G_CDS: -5.46 Total: -3.84 kcal Atomic # 8 Polarization: -14.17 SS G_CDS: -2.30 Total: -16.47 kcal Atomic # 9 Polarization: -1.17 SS G_CDS: 2.15 Total: 0.98 kcal Atomic # 14 Polarization: -3.54 SS G_CDS: 2.07 Total: -1.47 kcal Total: -26.47 0.88 -25.59 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15774724_12360598.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -192.929 kcal (2) G-P(sol) polarization free energy of solvation -26.473 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -219.401 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.881 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.591 kcal (6) G-S(sol) free energy of system = (1) + (5) -218.520 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.88 seconds